CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71763	Soybean	cytosol	63.07	69.88
KRH71762	Soybean	cytosol	36.24	54.74
KRH46376	Soybean	cytosol	63.41	54.01
KRG98483	Soybean	cytosol	45.99	53.23
KRG98484	Soybean	cytosol	19.51	50.45
KRG96334	Soybean	cytosol	38.33	31.61
KRH32747	Soybean	cytosol	39.02	30.6
KRH71764	Soybean	cytosol	38.33	30.56
KRH68070	Soybean	cytosol	40.07	30.5
KRG96335	Soybean	cytosol	40.07	30.34
KRG96333	Soybean	cytosol	42.86	30.0
KRG90150	Soybean	cytosol	13.94	18.87
KRG89898	Soybean	cytosol	23.0	17.46
KRH17929	Soybean	cytosol	23.34	15.12
CDY68000	Canola	nucleus	5.23	14.15
KRH73403	Soybean	nucleus	33.1	8.5
KRH14719	Soybean	nucleus	33.1	8.5
KRH33402	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.45	8.41
KRG90152	Soybean	cytosol	15.68	5.74
KRH61745	Soybean	nucleus	17.42	5.11
KRG92287	Soybean	nucleus	19.16	4.82
KRH31732	Soybean	nucleus	18.82	4.74
KRH34524	Soybean	nucleus	18.82	4.73
KRG90366	Soybean	endoplasmic reticulum, plasma membrane	19.51	4.56
KRH17931	Soybean	mitochondrion, nucleus	9.76	4.14
KRG89895	Soybean	nucleus	10.45	4.01
KRH52412	Soybean	nucleus	21.25	3.63
KRH33457	Soybean	cytosol	1.74	3.42
KRH16103	Soybean	nucleus	9.76	2.59
KRH04994	Soybean	nucleus	9.41	2.5
KRH61900	Soybean	cytosol, mitochondrion, nucleus	9.06	2.37
KRH52561	Soybean	cytosol	9.06	2.33
KRH61744	Soybean	cytosol	3.48	1.56
KRG90154	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02006205	EnsemblPlants:KRH32941	EnsemblPlantsGene:GLYMA_10G088100	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	PANTHER:PTHR24007
PANTHER:PTHR24007:SF12	PFAM:PF00917	PFscan:PS50144	ProteinID:KRH32941	ProteinID:KRH32941.1	SEG:seg
SMART:SM00061	SUPFAM:SSF49599	UniParc:UPI0006EE0AA4	UniProt:A0A0R0HR26	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr10:-:11587119..11588548

Molecular Weight (calculated)

33812.4 Da

IEP (calculated)

6.318

GRAVY (calculated)

-0.484

Length

287 amino acids

Sequence
(BLAST)

001: MRNQNTKDKM LEKFTWTIRN FSTIDSNELY SDSFFLDNHT WRILMFPKGD NVDYLSIYVD AGGDPAYLPR HWKKYAYFKL ALINQVNEKM NKIKEFSHMF
101: NASKIELGFS RFIPLDELCD SSRGFIVNDT CIIQVEILAN KSEHENQVDK SVSKIDDDKH VECTDNRLPK EMISASSDKL VDFRGIGKVE QDFVPLLEEV
201: CSRHPSLIDN KQKKSQRFIE WAFTALCRVL HFLKTKRVKD MDDDDACKLL QNLWEELEVF RFDLTWLEPH VQSALSMKKL YGEKLLW

Best Arabidopsis Sequence Match ( AT5G06600.3 )
(BLAST)

001: MTMMTPPPVD QPEDEEMLVP NSDLVDGPAQ PMEVTQPETA ASTVENQPAE DPPTLKFTWT IPNFSRQNTR KHYSDVFVVG GYKWRILIFP KGNNVDHLSM
101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEVYY

Arabidopsis Description

UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.