CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46376	Soybean	cytosol	87.5	64.39
KRH71762	Soybean	cytosol	49.19	64.21
KRH32941	Soybean	cytosol	53.23	45.99
KRH71763	Soybean	cytosol	45.16	43.24
KRG96334	Soybean	cytosol	44.35	31.61
KRH68070	Soybean	cytosol	46.37	30.5
KRG96333	Soybean	cytosol	49.19	29.76
KRH71764	Soybean	cytosol	43.15	29.72
KRG96335	Soybean	cytosol	45.16	29.55
KRH32747	Soybean	cytosol	43.15	29.23
KRG89898	Soybean	cytosol	11.69	7.67
KRH17929	Soybean	cytosol	11.69	6.55
KRG90152	Soybean	cytosol	19.76	6.25
KRH14719	Soybean	nucleus	26.21	5.81
KRH33402	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.61	5.78
KRH73403	Soybean	nucleus	25.81	5.72
KRH17931	Soybean	mitochondrion, nucleus	15.32	5.61
KRG89895	Soybean	nucleus	15.32	5.07
KRH33457	Soybean	cytosol	2.02	3.42
KRG92287	Soybean	nucleus	15.73	3.42
KRH31732	Soybean	nucleus	15.32	3.34
KRH34524	Soybean	nucleus	15.32	3.33
KRG90366	Soybean	endoplasmic reticulum, plasma membrane	16.13	3.26
KRH61745	Soybean	nucleus	11.69	2.96
KRH61744	Soybean	cytosol	7.26	2.81
KRH52412	Soybean	nucleus	18.95	2.8
KRG90154	Soybean	cytosol	2.02	2.76
KRG98484	Soybean	cytosol	1.21	2.7
KRH16103	Soybean	nucleus	11.69	2.69
KRH04994	Soybean	nucleus	10.89	2.5
KRH61900	Soybean	cytosol, mitochondrion, nucleus	10.48	2.37
KRH52561	Soybean	cytosol	9.68	2.15
KRG90150	Soybean	cytosol	0.0	0.0
CDY68000	Canola	nucleus	0.0	0.0

Protein Annotations

EMBL:ACUP02010892	EnsemblPlants:KRG98483	EnsemblPlantsGene:GLYMA_18G076700	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	ncoils:Coil
PANTHER:PTHR24007	PANTHER:PTHR24007:SF12	PFscan:PS50144	ProteinID:KRG98483	ProteinID:KRG98483.1	SUPFAM:SSF49599
UniParc:UPI0006EE0FF0	UniProt:A0A0R0F972	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:7294408..7295154

Molecular Weight (calculated)

28581.5 Da

IEP (calculated)

5.103

GRAVY (calculated)

-0.383

Length

248 amino acids

Sequence
(BLAST)

001: MFNATEIAWG FPKFIPLDEL CDSSSGFIVN DTCIIEVQIL VSKSEQDNQV NQQINKIDNN HDIDKPIKHT DNFLPKETLT TSFGELVDFR GLGKIEQVFV
101: PLLEEVCSRH PSLIDSQQKR SGRFVEWAFT ALGRVLHFLK TKKVKDMNGD ACNHLQILWE ELKMFRFDLT WLEPHVQSAL GMKTCIERSV QMKRMGEDVT
201: ALEMETKRLK AKMIEAEVNL EIARRNLMKE KEGFEECDLD AELGYGRP

Best Arabidopsis Sequence Match ( AT5G06600.2 )
(BLAST)

0001: MTMMTPPPVD PEDEEMLVPN SDLVDGPAQP MEVTQPETAA STVENQPAED PPTLKFTWTI PNFSRQNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVSDAASLP YGWSRYAQFS LAVVNQIHTR YTVRKETQHQ FNARESDWGF TSFMPLSELY DPSRGYLVND TVLVEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQQLFE GHHMNYIECI NVDFKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHG LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLELDLDR EDGKYLSPDA DRSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDL KRALEEQYGG EEELPQTNPG
0501: FNNNPPFKFT KYSNAYMLVY IRESDKDKII CNVDEKDIAE HLRVRLKKEQ EEKEDKRRYK AQAHLYTIIK VARDEDLKEQ IGKDIYFDLV DHDKVRSFRI
0601: QKQTPFQQFK EEVAKEFGVP VQLQRFWIWA KRQNHTYRPN RPLTPQEELQ PVGQIREASN KANTAELKLF LEVEHLDLRP IPPPEKSKED ILLFFKLYDP
0701: EKAVLSYAGR LMVKSSSKPM DITGKLNEMV GFAPDEEIEL FEEIKFEPCV MCEHLDKKTS FRLCQIEDGD IICFQKPLVN KEIECLYPAV PSFLEYVQNR
0801: QLVRFRALEK PKEDEFVLEL SKQHTYDDVV EKVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHHAT KEEVVIHNIR LPKQSTVGDV INELKTKVEL SHPDAELRLL EVFYHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLILVYH
1001: FAKETGQNQQ VQNFGEPFFL VIHEGETLEE IKNRIQKKLH VSDEDFAKWK FAFMSMGRPE YLQDTDVVYN RFQRRDVYGA FEQYLGLEHA DTTPKRAYAA
1101: NQNRHAYEKP VKIYN

Arabidopsis Description

UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.