CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32941	Soybean	cytosol	69.88	63.07
KRH71762	Soybean	cytosol	35.91	48.95
KRH46376	Soybean	cytosol	62.93	48.37
KRG98484	Soybean	cytosol	20.08	46.85
KRG98483	Soybean	cytosol	43.24	45.16
KRG96334	Soybean	cytosol	39.0	29.02
KRH68070	Soybean	cytosol	40.15	27.59
KRG96335	Soybean	cytosol	39.77	27.18
KRH32747	Soybean	cytosol	38.22	27.05
KRH71764	Soybean	cytosol	37.07	26.67
KRG96333	Soybean	cytosol	40.93	25.85
KRG89898	Soybean	cytosol	27.41	18.78
KRG90150	Soybean	cytosol	14.29	17.45
KRH17929	Soybean	cytosol	27.8	16.25
CDY68000	Canola	nucleus	5.79	14.15
KRH73403	Soybean	nucleus	36.29	8.41
KRH14719	Soybean	nucleus	36.29	8.41
KRH33402	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.98	7.71
KRH61745	Soybean	nucleus	19.69	5.21
KRG90152	Soybean	cytosol	15.44	5.1
KRH31732	Soybean	nucleus	20.08	4.57
KRG92287	Soybean	nucleus	20.08	4.56
KRH34524	Soybean	nucleus	19.69	4.47
KRG90366	Soybean	endoplasmic reticulum, plasma membrane	20.46	4.32
KRH33457	Soybean	cytosol	2.32	4.11
KRH17931	Soybean	mitochondrion, nucleus	9.27	3.55
KRG89895	Soybean	nucleus	10.04	3.47
KRH52412	Soybean	nucleus	20.85	3.22
KRH16103	Soybean	nucleus	10.04	2.41
KRH04994	Soybean	nucleus	9.65	2.31
KRH61900	Soybean	cytosol, mitochondrion, nucleus	9.65	2.28
KRH52561	Soybean	cytosol	9.27	2.15
KRH61744	Soybean	cytosol	1.16	0.47
KRG90154	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02001068	EnsemblPlants:KRH71763	EnsemblPlantsGene:GLYMA_02G167500	EntrezGene:102660968	Gene3D:2.60.210.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like
PANTHER:PTHR24007	PANTHER:PTHR24007:SF12	PFAM:PF00917	PFscan:PS50144	ProteinID:KRH71763	ProteinID:KRH71763.1
SMART:SM00061	SUPFAM:SSF49599	UniParc:UPI00023BBEE6	UniProt:K7K8X8	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr2:-:25728954..25730385

Molecular Weight (calculated)

30199.8 Da

IEP (calculated)

4.944

GRAVY (calculated)

-0.443

Length

259 amino acids

Sequence
(BLAST)

001: MDNENAKDKI FEKFTWRIRN FSTLDSKPLY SEEFFLDNHT WSILIYPKGN KVAYLSIYLD AGDPDDLPHG RRKYANFKLA LVNQVHDKYN DIEETSQVFS
101: ASETNWGFTT FTPLNKLCDP SLGFIVNDTC IIQVQILANK SKHENQVDQS VNKIDYKIVE RMDNPLPKEM ISTSFGGLVD FRGLGKLEED FVPLLEEVCS
201: RYPSLIDSMQ KRSQRFIEWA FTALGRVLHF LKTKNVMRDM DEDAYNHLQI LWEELETCV

Best Arabidopsis Sequence Match ( AT5G06600.3 )
(BLAST)

001: MTMMTPPPVD QPEDEEMLVP NSDLVDGPAQ PMEVTQPETA ASTVENQPAE DPPTLKFTWT IPNFSRQNTR KHYSDVFVVG GYKWRILIFP KGNNVDHLSM
101: YLDVSDAASL PYGWSRYAQF SLAVVNQIHT RYTVRKETQH QFNARESDWG FTSFMPLSEL YDPSRGYLVN DTVLVEAEVA VRKVLDYWSY DSKKETGFVG
201: LKNQGATCYM NSLLQTLYHI PYFRKAVYHM PTTENDAPTA SIPLALQSLF YKLQYNDTSV ATKELTKSFG WDTYDSFMQH DVQELNRVLC EKLEDKMKGT
301: VVEGTIQQLF EGHHMNYIEC INVDFKSTRK ESFYDLQLDV KGCKDVYASF DKYVEVERLE GDNKYHAEGH GLQDAKKGVL FIDFPPVLQL QLKRFEYDFM
401: RDTMVKINDR YEFPLELDLD REDGKYLSPD ADRSVRNLYT LHSVLVHSGG VHGGHYYAFI RPTLSDQWYK FDDERVTKED LKRALEEQYG GEEELPQTNP
501: GFNNNPPFKF TKYSNAYMLV YIRESDKDKI ICNVDEKDIA EHLRVRLKKE QEEKEDKRRY KAQAHLYTII KVARDEDLKE QIGKDIYFDL VDHDKVRSFR
601: IQKQTPFQQF KEEVAKEFGV PVQLQRFWIW AKRQNHTYRP NRPLTPQEEL QPVGQIREAS NKANTAELKL FLEVEHLDLR PIPPPEKSKE DILLFFKLYD
701: PEKAVLSYAG RLMVKSSSKP MDITGKLNEM VGFAPDEEIE LFEEIKFEPC VMCEHLDKKT SFRLCQIEDG DIICFQKPLV NKEIECLYPA VPSFLEYVQN
801: RQLVRFRALE KPKEDEFVLE LSKQHTYDDV VEKVAEKLGL DDPSKLRLTS HNCYSQQPKP QPIKYRGVDH LSDMLVHYNQ TSDILYYEVL DIPLPELQGL
901: KTLKVAFHHA TKEEVVIHNI RLPKQSTVGD VINELKTKVE LSHPDAELRL LEVFYHKIYK IFPSTERIEN INDQYWTLRA EEVYY

Arabidopsis Description

UBP12Ubiquitin carboxyl-terminal hydrolase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.