Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15717 | Canola | endoplasmic reticulum, golgi, plasma membrane | 96.0 | 94.12 |
| AT1G27320.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 86.31 | 83.4 |
| PGSC0003DMT400084727 | Potato | cytosol, golgi, plasma membrane | 37.76 | 70.26 |
| VIT_01s0010g03780.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 71.33 | 68.72 |
| KRH42680 | Soybean | plasma membrane | 68.33 | 66.41 |
| KRH58780 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 68.33 | 66.41 |
| Solyc05g015610.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 66.63 | 64.63 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 60.64 | 62.26 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, plasma membrane | 61.14 | 61.32 |
| GSMUA_Achr4P15980_001 | Banana | cytosol | 59.84 | 60.02 |
| TraesCS3D01G426600.1 | Wheat | plasma membrane | 57.94 | 58.29 |
| Zm00001d042312_P003 | Maize | golgi, mitochondrion, plasma membrane | 58.34 | 57.99 |
| TraesCS3A01G433200.1 | Wheat | peroxisome | 57.94 | 57.83 |
| KXG34012 | Sorghum | cytosol, peroxisome, plasma membrane | 58.04 | 57.81 |
| Os01t0923700-04 | Rice | endoplasmic reticulum, golgi, peroxisome | 58.94 | 57.67 |
| TraesCS3B01G469000.1 | Wheat | cytosol, golgi, mitochondrion, peroxisome | 57.34 | 56.89 |
| VIT_04s0008g03460.t01 | Wine grape | plastid | 18.68 | 55.65 |
| Zm00001d012005_P002 | Maize | plasma membrane | 58.04 | 55.65 |
| HORVU3Hr1G094870.10 | Barley | plasma membrane | 57.64 | 55.11 |
| CDY03102 | Canola | cytosol | 3.9 | 54.17 |
| CDY03106 | Canola | cytosol | 3.8 | 52.78 |
| CDY17631 | Canola | cytosol, peroxisome, plasma membrane | 50.85 | 48.38 |
| CDY03101 | Canola | cytosol, peroxisome, plasma membrane | 50.75 | 48.29 |
| CDX93074 | Canola | plasma membrane | 52.45 | 47.86 |
| CDY50037 | Canola | endoplasmic reticulum, golgi, plasma membrane | 52.35 | 47.68 |
| CDX74635 | Canola | cytosol, golgi, plasma membrane | 52.55 | 45.78 |
| CDY47297 | Canola | plasma membrane | 52.45 | 45.69 |
| CDY64702 | Canola | mitochondrion | 3.9 | 29.77 |
| CDY49629 | Canola | cytosol | 3.1 | 22.3 |
| CDY40112 | Canola | nucleus | 20.18 | 22.05 |
| CDY21123 | Canola | cytosol | 6.59 | 22.0 |
| CDX97049 | Canola | nucleus | 19.68 | 21.99 |
| CDX69808 | Canola | nucleus | 19.68 | 21.94 |
| CDY66567 | Canola | cytosol | 3.2 | 21.92 |
| CDY67688 | Canola | nucleus | 19.88 | 21.84 |
| CDY49633 | Canola | cytosol | 15.78 | 21.5 |
| CDY07498 | Canola | cytosol | 15.68 | 21.33 |
| CDX78398 | Canola | cytosol | 13.29 | 21.18 |
| CDX80113 | Canola | plasma membrane | 12.39 | 20.23 |
| CDY63851 | Canola | plasma membrane | 12.19 | 19.58 |
| CDY30004 | Canola | plasma membrane | 13.99 | 18.28 |
| CDX90318 | Canola | cytosol | 5.49 | 17.86 |
| CDY70443 | Canola | plasma membrane | 13.49 | 17.31 |
| CDY35503 | Canola | plasma membrane | 13.39 | 17.2 |
| CDY24380 | Canola | nucleus | 20.38 | 17.09 |
| CDY20843 | Canola | nucleus | 20.28 | 17.02 |
| CDY01193 | Canola | endoplasmic reticulum, golgi, plasma membrane | 17.78 | 16.67 |
| CDX80103 | Canola | endoplasmic reticulum, golgi, plasma membrane | 18.48 | 16.62 |
| CDY12735 | Canola | endoplasmic reticulum, golgi, plasma membrane | 17.58 | 16.53 |
| CDY55381 | Canola | endoplasmic reticulum, plasma membrane, plastid | 18.18 | 15.94 |
| CDX70367 | Canola | endoplasmic reticulum, golgi | 19.98 | 14.58 |
| CDY67999 | Canola | plasma membrane | 8.59 | 13.89 |
| CDX86641 | Canola | endoplasmic reticulum | 8.19 | 13.78 |
| CDY70681 | Canola | endoplasmic reticulum | 8.49 | 13.78 |
| CDX78397 | Canola | cytosol | 5.09 | 13.25 |
| CDY15498 | Canola | plasma membrane | 11.09 | 6.49 |
Protein Annotations
| Gene3D:1.10.287.130 | MapMan:11.4.2.1 | Gene3D:3.30.450.350 | Gene3D:3.40.50.2300 | GO:A0A078ETH6 | EnsemblPlants:CDY03909 |
| ProteinID:CDY03909 | ProteinID:CDY03909.1 | InterPro:CHASE_dom | InterPro:CheY-like_superfamily | ncoils:Coil | GO:GO:0000155 |
| GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0006139 | GO:GO:0006464 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009116 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0016772 | GO:GO:0019538 | GO:GO:0038023 |
| EnsemblPlantsGene:GSBRNA2T00117401001 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:HisK_dim/P | InterPro:HisK_dim/P_sf | InterPro:His_kinase_dom |
| InterPro:IPR001789 | InterPro:IPR005467 | InterPro:IPR006189 | InterPro:IPR036890 | PFAM:PF00072 | PFAM:PF00512 |
| PFAM:PF02518 | PFAM:PF03924 | PRINTS:PR00344 | InterPro:PRibTrfase_dom | PFscan:PS50109 | PFscan:PS50110 |
| PFscan:PS50839 | PANTHER:PTHR43719 | PANTHER:PTHR43719:SF14 | SMART:SM00387 | SMART:SM00388 | SMART:SM00448 |
| SMART:SM01079 | SUPFAM:SSF47384 | SUPFAM:SSF52172 | SUPFAM:SSF55874 | InterPro:Sig_transdc_His_kin-like_C | InterPro:Sig_transdc_resp-reg_receiver |
| SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EE1CFC | SEG:seg | : | : |
Description
BnaC07g11340D
Coordinates
chrLK031947:+:755586..760262
Molecular Weight (calculated)
112304.0 Da
IEP (calculated)
7.311
GRAVY (calculated)
-0.132
Length
1001 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLFHVLGFC LKIGQLFWML CCWFLSWFVD ADKFPLPVGS VGDPDKTKMK NHNMCFFWNK ISTSGLKIPS FSHHLFGSVR FGKTFWRKVL VAWVVSWVLI
0101: SFWTFWCLSS QAMDKRKETL ASMCDERASM LQDQFNVSMN HVQAMSILIS TFHHAKFPSA IDQRTFSEYT DRTSFERPLT SGVAYAVRVL HSERQEFERQ
0201: QGWTIRRMDS LEQNPEYAPV IFAQDTVSHV ISLDMLSGKE DRENVLRARR SGKGVLTAPF PLIKTNRLGV ILTFAVYKRD LPSNATPKER IEATNGYLGG
0301: VFDIETLVEN LLQQLASKQT ILVNVYDTTN HSQPISMYGS DVSADVLEHV SQLNFGDPFR KHEMRCRFKQ KPPWPVQSMV TSFGILVIAL LVAHIFHATL
0401: SRIRRAEEDC HKMELLKKKA EAADVAKSQF LATVSHEIRT PMNGVLGMLH MLMDTELDVT QQDYVRTAQA SGKALVSLIN EVLDQAKIES GKVELEEVRF
0501: DLRGILDDVL SLFSGKSQEK GLELAVYISD RVPEMLIGDP GRFRQILTNL MGNSIKFTEK GHIFVTVHLV EELLDSSDVE ASENTLSGLP VADRQRSWQN
0601: FKAFSSNGHR GLAPAPSEIN LIVSVEDTGV GIPVEAQSRI FTPFMQVGPS ISRTHGGTGI GLSISKCLVG LMKGEIGFSS TPKVGSTFTF TAVFANGVHS
0701: TERKSELHNN NKPEFEGMKA VLVDHRPARA QVSWYHFQRL GIRVELVPSV DQALRFMKTC ATTVNMILVE QEVWNKEADV FVKEPLVHSP KLFLLANSID
0801: TSVSDTLSNV IDPPVLIVKP LRASMLAATL QRGLGIGNRE TPQRKGPPAL ILRNLLLGRK ILIVDDNNVN LRVAAGALKK YGADVVCAES GVKSISLLKP
0901: PHEFDACFMD IQMPEMDGFE ATRRIRGMEE EMNNGKALTE EEVKRSRWHL PVLAMTADVI QATHEECLKC GMDGYVSKPF EAEQLYREVS RFFNSPSDTE
1001: S
0101: SFWTFWCLSS QAMDKRKETL ASMCDERASM LQDQFNVSMN HVQAMSILIS TFHHAKFPSA IDQRTFSEYT DRTSFERPLT SGVAYAVRVL HSERQEFERQ
0201: QGWTIRRMDS LEQNPEYAPV IFAQDTVSHV ISLDMLSGKE DRENVLRARR SGKGVLTAPF PLIKTNRLGV ILTFAVYKRD LPSNATPKER IEATNGYLGG
0301: VFDIETLVEN LLQQLASKQT ILVNVYDTTN HSQPISMYGS DVSADVLEHV SQLNFGDPFR KHEMRCRFKQ KPPWPVQSMV TSFGILVIAL LVAHIFHATL
0401: SRIRRAEEDC HKMELLKKKA EAADVAKSQF LATVSHEIRT PMNGVLGMLH MLMDTELDVT QQDYVRTAQA SGKALVSLIN EVLDQAKIES GKVELEEVRF
0501: DLRGILDDVL SLFSGKSQEK GLELAVYISD RVPEMLIGDP GRFRQILTNL MGNSIKFTEK GHIFVTVHLV EELLDSSDVE ASENTLSGLP VADRQRSWQN
0601: FKAFSSNGHR GLAPAPSEIN LIVSVEDTGV GIPVEAQSRI FTPFMQVGPS ISRTHGGTGI GLSISKCLVG LMKGEIGFSS TPKVGSTFTF TAVFANGVHS
0701: TERKSELHNN NKPEFEGMKA VLVDHRPARA QVSWYHFQRL GIRVELVPSV DQALRFMKTC ATTVNMILVE QEVWNKEADV FVKEPLVHSP KLFLLANSID
0801: TSVSDTLSNV IDPPVLIVKP LRASMLAATL QRGLGIGNRE TPQRKGPPAL ILRNLLLGRK ILIVDDNNVN LRVAAGALKK YGADVVCAES GVKSISLLKP
0901: PHEFDACFMD IQMPEMDGFE ATRRIRGMEE EMNNGKALTE EEVKRSRWHL PVLAMTADVI QATHEECLKC GMDGYVSKPF EAEQLYREVS RFFNSPSDTE
1001: S
0001: MSLFHVLGFG VKIGHLFWML CCWFVSWFVD NGIEDKSGLL VGSVGDLEKT KMTTLKKKNK MWFWNKISSS GLKIPSFSYQ FLGSVKFNKA WWRKLVVVWV
0101: VFWVLVSIWT FWYFSSQAME KRKETLASMC DERARMLQDQ FNVSMNHVQA MSILISTFHH GKIPSAIDQR TFSEYTDRTS FERPLTSGVA YAMRVLHSER
0201: EEFERQQGWT IRKMYSLEQN PVHKDDYDLE ALEPSPVQEE YAPVIFAQDT VSHVVSLDML SGKEDRENVL RARSSGKGVL TAPFPLIKTN RLGVILTFAV
0301: YKRDLPSNAT PKERIEATNG YLGGVFDIES LVENLLQQLA SKQTILVNVY DITNHSQPIS MYGTNVSADG LERVSPLIFG DPLRKHEMRC RFKQKPPWPV
0401: LSMVTSFGIL VIALLVAHII HATVSRIHKV EEDCDKMKQL KKKAEAADVA KSQFLATVSH EIRTPMNGVL GMLHMLMDTE LDVTQQDYVR TAQASGKALV
0501: SLINEVLDQA KIESGKLELE EVRFDLRGIL DDVLSLFSSK SQQKGVELAV YISDRVPDML IGDPGRFRQI LTNLMGNSIK FTEKGHIFVT VHLVDELFES
0601: IDGETASSPE STLSGLPVAD RQRSWENFKA FSSNGHRSFE PSPPDINLIV SVEDTGVGIP VEAQSRIFTP FMQVGPSISR THGGTGIGLS ISKCLVGLMK
0701: GEIGFSSTPK VGSTFTFTAV FSNGMQPAER KNDNNQPIFS EFRGMKAVVV DHRPARAKVS WYHFQRLGIR VEVVPRVEQA LHYLKIGTTT VNMILIEQEI
0801: WNREADDFIK KLQKDPLFLS PKLILLANSV ESSISEALCT GIDPPIVIVK PLRASMLAAT LQRGLGIGIR EPPQHKGPPA LILRNLLLGR KILIVDDNNV
0901: NLRVAAGALK KYGADVVCAE SGIKAISLLK PPHEFDACFM DIQMPEMDGF EATRRIRDME EEMNKRIKNG EALIVENGNK TSWHLPVLAM TADVIQATHE
1001: ECLKCGMDGY VSKPFEAEQL YREVSRFFNS PSDTES
0101: VFWVLVSIWT FWYFSSQAME KRKETLASMC DERARMLQDQ FNVSMNHVQA MSILISTFHH GKIPSAIDQR TFSEYTDRTS FERPLTSGVA YAMRVLHSER
0201: EEFERQQGWT IRKMYSLEQN PVHKDDYDLE ALEPSPVQEE YAPVIFAQDT VSHVVSLDML SGKEDRENVL RARSSGKGVL TAPFPLIKTN RLGVILTFAV
0301: YKRDLPSNAT PKERIEATNG YLGGVFDIES LVENLLQQLA SKQTILVNVY DITNHSQPIS MYGTNVSADG LERVSPLIFG DPLRKHEMRC RFKQKPPWPV
0401: LSMVTSFGIL VIALLVAHII HATVSRIHKV EEDCDKMKQL KKKAEAADVA KSQFLATVSH EIRTPMNGVL GMLHMLMDTE LDVTQQDYVR TAQASGKALV
0501: SLINEVLDQA KIESGKLELE EVRFDLRGIL DDVLSLFSSK SQQKGVELAV YISDRVPDML IGDPGRFRQI LTNLMGNSIK FTEKGHIFVT VHLVDELFES
0601: IDGETASSPE STLSGLPVAD RQRSWENFKA FSSNGHRSFE PSPPDINLIV SVEDTGVGIP VEAQSRIFTP FMQVGPSISR THGGTGIGLS ISKCLVGLMK
0701: GEIGFSSTPK VGSTFTFTAV FSNGMQPAER KNDNNQPIFS EFRGMKAVVV DHRPARAKVS WYHFQRLGIR VEVVPRVEQA LHYLKIGTTT VNMILIEQEI
0801: WNREADDFIK KLQKDPLFLS PKLILLANSV ESSISEALCT GIDPPIVIVK PLRASMLAAT LQRGLGIGIR EPPQHKGPPA LILRNLLLGR KILIVDDNNV
0901: NLRVAAGALK KYGADVVCAE SGIKAISLLK PPHEFDACFM DIQMPEMDGF EATRRIRDME EEMNKRIKNG EALIVENGNK TSWHLPVLAM TADVIQATHE
1001: ECLKCGMDGY VSKPFEAEQL YREVSRFFNS PSDTES
Arabidopsis Description
AHK3HK3 [Source:UniProtKB/TrEMBL;Acc:A0A178WL02]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.