CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70289
CDX80884
CDX85268	plasma membrane
CDX86370	plasma membrane
CDY00096	plasma membrane
CDY10360
CDY11267
CDY19286	plasma membrane
CDY19992	plasma membrane
CDY37282	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47430.1	CDY19286	AT3G21510.1	21569135
AT2G47430.1	CDY37282	AT3G21510.1	21569135
AT2G47430.1	CDX85268	AT3G29350.1	10930573
AT2G47430.1	CDX86370	AT3G29350.1	10930573
AT2G47430.1	CDY00096	AT3G29350.1	10930573
AT2G47430.1	CDY19992	AT3G29350.1	10930573
AT2G47430.1	CDX85268	AT3G29350.1	21569135
AT2G47430.1	CDX86370	AT3G29350.1	21569135
AT2G47430.1	CDY00096	AT3G29350.1	21569135
AT2G47430.1	CDY19992	AT3G29350.1	21569135
AT2G47430.1	CDX70289	AT5G03730.1	9560288
AT2G47430.1	CDX80884	AT5G03730.1	9560288
AT2G47430.1	CDY10360	AT5G03730.1	9560288
AT2G47430.1	CDY11267	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80103	Canola	endoplasmic reticulum, golgi, plasma membrane	92.47	94.88
AT2G47430.1	Thale cress	plasma membrane	69.09	70.32
CDY01193	Canola	endoplasmic reticulum, golgi, plasma membrane	61.12	65.36
CDY12735	Canola	endoplasmic reticulum, golgi, plasma membrane	60.51	64.88
Solyc12g099720.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	27.06	41.76
VIT_07s0005g01380.t01	Wine grape	plasma membrane	39.75	41.5
PGSC0003DMT400011818	Potato	extracellular, golgi, peroxisome	27.5	40.99
KRH68254	Soybean	cytosol	37.22	40.25
EER94128	Sorghum	extracellular, plasma membrane	22.5	34.59
Zm00001d012994_P001	Maize	extracellular, golgi, vacuole	22.07	34.29
TraesCS4A01G340900.1	Wheat	endoplasmic reticulum, golgi	20.93	32.56
TraesCS5B01G533800.1	Wheat	endoplasmic reticulum, golgi	20.75	32.29
KXG26059	Sorghum	endoplasmic reticulum, extracellular, golgi	15.59	31.45
GSMUA_Achr3P22920_001	Banana	extracellular	24.52	29.17
TraesCS7D01G148400.1	Wheat	endoplasmic reticulum, plasma membrane	21.63	26.94
Os06t0183200-01	Rice	endoplasmic reticulum, golgi, plasma membrane	24.69	26.91
TraesCS7A01G146600.1	Wheat	plasma membrane	25.31	26.73
TraesCS7D01G148100.1	Wheat	plasma membrane	25.31	26.71
TraesCS7B01G049100.1	Wheat	plasma membrane	25.39	26.29
Zm00001d035846_P001	Maize	extracellular	23.82	26.25
KXG19481	Sorghum	plasma membrane	24.87	26.03
TraesCS7D01G148700.1	Wheat	peroxisome, plasma membrane, plastid	21.8	25.86
TraesCS7B01G049400.1	Wheat	plasma membrane	23.29	25.45
HORVU7Hr1G030040.2	Barley	extracellular	22.15	24.44
CDY64702	Canola	mitochondrion	2.63	22.9
CDY49629	Canola	cytosol	2.45	20.14
CDY21123	Canola	cytosol	5.25	20.0
CDY20843	Canola	nucleus	20.58	19.7
CDY24380	Canola	nucleus	20.58	19.68
CDY15717	Canola	endoplasmic reticulum, golgi, plasma membrane	16.55	18.51
CDY66567	Canola	cytosol	2.36	18.49
CDY03909	Canola	endoplasmic reticulum, golgi, plasma membrane	15.94	18.18
CDY17631	Canola	cytosol, peroxisome, plasma membrane	16.73	18.16
CDY03101	Canola	cytosol, peroxisome, plasma membrane	16.64	18.06
CDY03102	Canola	cytosol	1.14	18.06
CDY49633	Canola	cytosol	11.12	17.28
CDY07498	Canola	cytosol	11.12	17.26
CDY67688	Canola	nucleus	13.4	16.79
CDX93074	Canola	plasma membrane	16.11	16.77
CDY50037	Canola	endoplasmic reticulum, golgi, plasma membrane	16.11	16.74
CDY03106	Canola	cytosol	1.05	16.67
CDY40112	Canola	nucleus	13.31	16.59
CDX69808	Canola	nucleus	12.96	16.48
CDX97049	Canola	nucleus	12.78	16.29
CDX80113	Canola	plasma membrane	8.58	15.99
CDY47297	Canola	plasma membrane	15.67	15.58
CDX74635	Canola	cytosol, golgi, plasma membrane	15.59	15.49
CDX78398	Canola	cytosol	8.49	15.45
CDY63851	Canola	plasma membrane	8.23	15.09
CDY30004	Canola	plasma membrane	9.02	13.45
CDX70367	Canola	endoplasmic reticulum, golgi	13.31	11.08
CDX90318	Canola	cytosol	2.98	11.04
CDY35503	Canola	plasma membrane	7.27	10.65
CDY70443	Canola	plasma membrane	7.27	10.64
CDY67999	Canola	plasma membrane	5.25	9.69
CDX86641	Canola	endoplasmic reticulum	4.99	9.58
CDY70681	Canola	endoplasmic reticulum	5.17	9.56
CDX78397	Canola	cytosol	2.89	8.57
CDY15498	Canola	plasma membrane	6.48	4.33

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.3	Gene3D:3.40.50.2300	GO:A0A078IYA8	UniProt:A0A078IYA8	EnsemblPlants:CDY55381
ProteinID:CDY55381	ProteinID:CDY55381.1	InterPro:CheY-like_superfamily	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674
GO:GO:0003824	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538
GO:GO:0023014	GO:GO:0038023	EnsemblPlantsGene:GSBRNA2T00016787001	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P
InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR036890	PFAM:PF00072
PFAM:PF00512	PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PANTHER:PTHR43711
PANTHER:PTHR43711:SF1	SMART:SM00387	SMART:SM00388	SMART:SM00448	SUPFAM:SSF47384	SUPFAM:SSF52172
SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI0004EF2BF7	SEG:seg

Description

BnaC04g51990DBnaC04g51990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYA8]

Coordinates

chrLK033398:-:32862..45598

Molecular Weight (calculated)

126689.0 Da

IEP (calculated)

7.110

GRAVY (calculated)

-0.148

Length

1142 amino acids

Sequence
(BLAST)

0001: MSFTIYYIST RATAQIHLLI SLIFLVFVLW IFKSTEVMVK VTKFVSSRPL VSLILLVIFL DLQIIFIIKF WLLTTKNIRN NVDSLTEDIR SGLVSEIENI
0101: GRFIYPKTNS STISLAGVID SFITNNNNVH FTEIQTQIAP VLFHAYSTIP EVSQVSYIST DGLLFSYITG INTSFAVFAN STGGDYTWYT QTIDQKTGLL
0201: NGDATRSQPL DVTNTDWFHA AQRDHITSFV GTGLGGEDNE RLFQTVVSLD SKKGVVSLGF PVKSFTSDLN RLNLRGGELY MWTKDGTVLV YESSLNVSSF
0301: IPRDCSSGWV KETKGSKFEA YCSVLEVSGV PLSYTLMSPN KGIGTSISNA AMYMLIFMAI YAFFWPLGFV VCMVRAARRE MDLRSSLINQ MEATQQAERK
0401: SMNKSQAFAQ ASHDIRGSLA GITGLIDLCR QEVKPGSDVD ASLQQMNVCT KDLVGLLNSV LDMSKIESGK MLLEEEEFNL AKLLEDVVDF FHPMAMKKKV
0501: DVVLDLHDGS ILKSSNVRGD SGKLKQILNN LVSNAVKFTV DGHISIRAWA QKPGPKSSVV LASEPKGSVS MFSKLMLCMS KDQSSSSAYE NEISNSIRKN
0601: ANTMEFVFEV DDTGKGIPVE MRKSVFENYV QVRETARGQQ GTGLGLGIVQ SLVRLMGGEI RITEKAMGEK GTCFQFNVLL MTVSETDVNA REEDIESVTG
0701: GDYVASTPNL GLTINTSSGG SMNIRHHLSP RFNNCLSSSP KQEASRVVLL LKDEERRRVT EKSIKILGIK VTVVEKWENL SNSLERLFGF SPQSSMESSL
0801: RNELSSTSSR ELPLIGTDGV DSRSQIPRRR SASFSAFVLL MIDANAGPFP EMSDIVEQFR RGLHHGIVCK VVWLNEPTGR GSERGDVCCL KPLHGSRLNR
0901: VLKMLPELGG IVPRESLLRH TLVATSPKGT TSCEIQEVEE EEEQSLRFNK KIGKTIMGPT ASERETWAKS VRTVPKPVGN SEDERVTSNA SCDELLKGKR
1001: VMVVDDNRIT SSVATRKLKK MGVSEVRQCD NGNEAVRLVS EWLTQQGSVV DVLPFDYIFM DCQMPVMDGY ETTREIRKVE RNYGVHIPII AVSGHRPGST
1101: EAKDTIKAGM DAFLEKDMNQ DQLGKIIREI ESKRTVHATT VQ

Best Arabidopsis Sequence Match ( AT2G47430.1 )
(BLAST)

0001: MMVKVTKLVA SRPIVVFCVL AFLVVVFECI WISNWRTTTE NLVKEVASFT EDLRTSLVSE IENIGKFTYA KTNLSTIGLA RVIDSYITNN DTGFTEIQTQ
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH

Arabidopsis Description

CKI1Histidine kinase CKI1 [Source:UniProtKB/Swiss-Prot;Acc:O22267]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.