Factsheet for TraesCS4A01G340900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G302000.1
TraesCS4B01G012100.1
TraesCS4D01G010200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47430.1	TraesCS4A01G302000.1	AT5G03730.1	9560288
AT2G47430.1	TraesCS4B01G012100.1	AT5G03730.1	9560288
AT2G47430.1	TraesCS4D01G010200.1	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G533800.1	Wheat	endoplasmic reticulum, golgi	91.96	91.96
TraesCS7A01G146600.1	Wheat	plasma membrane	79.84	54.21
Zm00001d012994_P001	Maize	extracellular, golgi, vacuole	53.81	53.74
KXG26059	Sorghum	endoplasmic reticulum, extracellular, golgi	38.15	49.47
Os06t0183200-01	Rice	endoplasmic reticulum, golgi, plasma membrane	58.86	41.22
Zm00001d035846_P001	Maize	extracellular	53.81	38.13
KXG19481	Sorghum	plasma membrane	56.27	37.86
Solyc12g099720.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	33.65	33.38
PGSC0003DMT400011818	Potato	extracellular, golgi, peroxisome	33.52	32.11
GSMUA_Achr3P22920_001	Banana	extracellular	38.83	29.69
KRH68254	Soybean	cytosol	35.69	24.81
VIT_07s0005g01380.t01	Wine grape	plasma membrane	35.97	24.13
Bra032761.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	32.97	23.29
CDY01193	Canola	endoplasmic reticulum, golgi, plasma membrane	32.97	22.66
CDY12735	Canola	endoplasmic reticulum, golgi, plasma membrane	32.29	22.25
AT2G47430.1	Thale cress	plasma membrane	33.92	22.19
CDX80103	Canola	endoplasmic reticulum, golgi, plasma membrane	32.56	21.47
CDY55381	Canola	endoplasmic reticulum, plasma membrane, plastid	32.56	20.93
TraesCS4A01G264800.1	Wheat	cytosol, peroxisome, plasma membrane	20.71	15.22
TraesCS3A01G433200.1	Wheat	peroxisome	20.71	15.15
TraesCS6A01G312500.2	Wheat	cytosol	20.16	14.99
TraesCS7A01G498200.2	Wheat	nucleus	17.85	13.53
TraesCS5A01G002600.1	Wheat	cytosol, plasma membrane, vacuole	10.63	12.32
TraesCS4A01G274300.1	Wheat	cytosol, golgi, plasma membrane	10.63	12.28
TraesCS2A01G472800.2	Wheat	nucleus	9.95	12.15
TraesCS1A01G096600.1	Wheat	cytosol, golgi, plasma membrane	9.81	11.29
TraesCS2A01G000200.1	Wheat	plasma membrane	9.26	8.74
TraesCS6A01G399400.2	Wheat	mitochondrion, plasma membrane	9.54	8.65
TraesCS6A01G285800.1	Wheat	plasma membrane	8.17	8.24
TraesCS6A01G329400.1	Wheat	plasma membrane	7.49	7.53
TraesCS4A01G344200.1	Wheat	cytosol, golgi, plasma membrane	0.14	0.33

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.3	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	ncoils:Coil	GO:GO:0000155
GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0038023	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR036890
PFAM:PF00072	PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PANTHER:PTHR43711
PANTHER:PTHR43711:SF1	SMART:SM00387	SMART:SM00388	SMART:SM00448	SUPFAM:SSF47384	SUPFAM:SSF52172
SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G340900	EnsemblPlants:TraesCS4A01G340900.1
TIGR:cd00075	TIGR:cd00082	TIGR:cd00156	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:+:621737852..621741086

Molecular Weight (calculated)

81147.3 Da

IEP (calculated)

6.348

GRAVY (calculated)

-0.136

Length

734 amino acids

Sequence
(BLAST)

001: MEVVAVCIVC TVVAIATIVC FLMARAMWRA GAREAVLEAD LVRQKEALRQ AERKSMNKSN AFARASHDIR SSLAAVVGLI ELSRLEAHEN PNLTYNLDQM
101: GVGTNKLFDI LNTILDMGKV ESGKMQLEEV EFKMTYVLEE SMDLVNVVGM SRGMEVIWDP CDFSVLRCTA TIGDYKRVKQ ILDNLLSNAI KFTHEGHVML
201: RAWANRPIMR RSVISTPTRF APRLRPGGVF RWLLGRRENC NEHNGCMFLQ NDPNSVEFYF EVVDTGVGIP KEKRESVFEN YVQVKEGHGG TGLGLGIVQS
301: FVRLMGGEIN IMDKEPGEAG TCFGFNVFLK VSETPEVEED IEQGRTPPSL FSEPACFKGG HCVLLVHGDQ TRRILHTWME SLGMKVWPVP HTELLASTLD
401: KARIAGGASP SRPALMSSLH GVGGGDFDCT TDRCFSSKEM VRHLQNSSGM AGNHSGCVHP FGLLVIVDIS SGMHHEVARE AASLARIRHQ APCRVVCLTD
501: LKTPSEDLRK FKEAAICDLD LRKPIHGSRL HKLLQVMRDL QASPFQQQHL YQFGTAMKEL PAADHTSEMT PAAAAPTLQG PTIVEDGRPL EDIRVLLAED
601: TLVLQMVQKQ VLTNLGAAVE IATDGSMAVA MFTKALEGAN GVPESHVDTG AMPYDVIFMD CQMPVMDGYE ATRRIREEES RHGIRTPIIA LTAHSEEEGQ
701: QEAIQAGMDL HLTKPIPKSK IAEIVLELRN EIKK

Best Arabidopsis Sequence Match ( AT2G47430.1 )
(BLAST)

0001: MMVKVTKLVA SRPIVVFCVL AFLVVVFECI WISNWRTTTE NLVKEVASFT EDLRTSLVSE IENIGKFTYA KTNLSTIGLA RVIDSYITNN DTGFTEIQTQ
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH

Arabidopsis Description

CKI1Histidine kinase CKI1 [Source:UniProtKB/Swiss-Prot;Acc:O22267]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.