Factsheet for Solyc12g099720.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g080540.2.1	plasma membrane
Solyc06g084410.2.1	plasma membrane
Solyc09g009090.2.1
Solyc10g083610.1.1
Solyc10g085570.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47430.1	Solyc01g080540.2.1	AT3G21510.1	21569135
AT2G47430.1	Solyc06g084410.2.1	AT3G29350.1	10930573
AT2G47430.1	Solyc06g084410.2.1	AT3G29350.1	21569135
AT2G47430.1	Solyc09g009090.2.1	AT5G03730.1	9560288
AT2G47430.1	Solyc10g083610.1.1	AT5G03730.1	9560288
AT2G47430.1	Solyc10g085570.1.1	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011818	Potato	extracellular, golgi, peroxisome	92.7	89.56
Solyc02g083670.2.1	Tomato	cytosol	4.46	44.0
Zm00001d012994_P001	Maize	extracellular, golgi, vacuole	33.78	34.01
TraesCS4A01G340900.1	Wheat	endoplasmic reticulum, golgi	33.38	33.65
TraesCS5B01G533800.1	Wheat	endoplasmic reticulum, golgi	32.97	33.24
VIT_07s0005g01380.t01	Wine grape	plasma membrane	47.97	32.45
KRH68254	Soybean	cytosol	44.32	31.06
EER94128	Sorghum	extracellular, plasma membrane	31.08	30.96
KXG26059	Sorghum	endoplasmic reticulum, extracellular, golgi	23.24	30.39
Bra032761.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	39.73	28.3
CDX80103	Canola	endoplasmic reticulum, golgi, plasma membrane	41.76	27.76
CDY01193	Canola	endoplasmic reticulum, golgi, plasma membrane	39.19	27.15
CDY55381	Canola	endoplasmic reticulum, plasma membrane, plastid	41.76	27.06
CDY12735	Canola	endoplasmic reticulum, golgi, plasma membrane	38.51	26.76
AT2G47430.1	Thale cress	plasma membrane	40.41	26.65
GSMUA_Achr3P22920_001	Banana	extracellular	33.65	25.94
TraesCS7D01G148400.1	Wheat	endoplasmic reticulum, plasma membrane	31.49	25.41
Zm00001d035846_P001	Maize	extracellular	33.24	23.75
TraesCS7D01G148100.1	Wheat	plasma membrane	34.32	23.48
TraesCS7A01G146600.1	Wheat	plasma membrane	34.19	23.4
KXG19481	Sorghum	plasma membrane	34.32	23.28
TraesCS7D01G148700.1	Wheat	peroxisome, plasma membrane, plastid	30.14	23.16
HORVU7Hr1G030040.2	Barley	extracellular	32.03	22.9
Os06t0183200-01	Rice	endoplasmic reticulum, golgi, plasma membrane	32.3	22.81
TraesCS7B01G049100.1	Wheat	plasma membrane	33.92	22.76
TraesCS7B01G049400.1	Wheat	plasma membrane	31.08	22.01
Solyc12g038690.1.1	Tomato	cytosol	1.62	18.75
Solyc09g065310.1.1	Tomato	cytosol	1.62	18.75
Solyc04g049320.1.1	Tomato	cytosol, plastid, vacuole	2.7	18.18
Solyc12g062760.1.1	Tomato	cytosol	2.03	17.05
Solyc12g027610.1.1	Tomato	cytosol	4.46	16.92
Solyc04g025660.1.1	Tomato	cytosol	2.3	16.35
Solyc09g011680.1.1	Tomato	cytosol	2.3	16.35
Solyc04g064840.1.1	Tomato	endoplasmic reticulum	3.92	16.02
Solyc06g051610.1.1	Tomato	cytosol	3.51	15.66
Solyc09g082910.1.1	Tomato	cytosol	3.24	14.46
Solyc04g008110.2.1	Tomato	plasma membrane	19.32	14.4
Solyc12g044870.1.1	Tomato	cytosol	3.11	13.86
Solyc04g049990.1.1	Tomato	cytosol	2.43	13.74
Solyc07g056580.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	13.65	13.72
Solyc05g015610.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	19.05	13.66
Solyc02g083680.1.1	Tomato	plastid	16.08	13.54
Solyc12g011330.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	13.38	13.13
Solyc06g036450.1.1	Tomato	cytosol	1.76	13.0
Solyc08g068960.2.1	Tomato	cytosol	17.84	12.97
Solyc11g065590.1.1	Tomato	cytosol	1.49	12.22
Solyc01g014770.1.1	Tomato	cytosol	2.16	11.94
Solyc08g068360.1.1	Tomato	cytosol	1.89	11.67
Solyc07g047770.2.1	Tomato	golgi	19.46	11.66
Solyc09g075440.2.1	Tomato	plasma membrane	9.73	11.34
Solyc06g053710.2.1	Tomato	plasma membrane	9.86	9.59
Solyc09g089610.2.1	Tomato	endoplasmic reticulum	9.59	9.42
Solyc11g006180.1.1	Tomato	plasma membrane	9.46	9.13
Solyc05g055070.2.1	Tomato	plasma membrane	8.51	8.46

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.3	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	ncoils:Coil	GO:GO:0000155
GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016772	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR036890	UniProt:K4DHZ3
PFAM:PF00072	PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PANTHER:PTHR43719
SMART:SM00387	SMART:SM00448	SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C
InterPro:Sig_transdc_resp-reg_receiver	EnsemblPlantsGene:Solyc12g099720.1	EnsemblPlants:Solyc12g099720.1.1	TMHMM:TMhelix	UniParc:UPI000276A860	SEG:seg

Description

No Description!

Coordinates

chr12:+:66745281..66748831

Molecular Weight (calculated)

83437.2 Da

IEP (calculated)

7.154

GRAVY (calculated)

-0.245

Length

740 amino acids

Sequence
(BLAST)

001: MNLSLFKVPM PVGVCLVLVY NVHDVLQRDY HKNIKFGFML IILMIVSLAI SIVTFVILTI RAARREMYLC SALIKQMEAT QQAERKSMNK STASARANHD
101: VRASLAGISG LIWMCRVQAS PQSELVKYLD HMESCKNDLL DMLNSILDEN KIEEGKKQLK EEEFNMEELV EHVVNIYYPN GAMKNVDVLL DPCDGSIARF
201: SRVKGDRIEL QRILNNLLQN ADKFTSEGHI TLRAWARKPG FEESSNLAPN TSDSSISCMP CLRLQKDEAS AEVRVLNRVQ QDPNCVEFIF EVDDTGKGIP
301: KEKQKSVFEN YVQVNDQTTS VHGSQAGTGL GLGITQSLVR LMGGEIGIVD KQIGEKGTCF RFNIFLIACD QPQLQEHEAI SVNCAKEEDL ESQLGGDYSV
401: ASDNSITSHQ KSNVILFIKE EERSRVLRRF MMNVLGLKVH VVNRNEQFPQ TLKKVKGKIT NSSSSSCKSK EIPLSSLDGT DIDISSFQRR GRGLVIRFIL
501: IIIDTSDGLT REMSRAMAEL RKDFPKNVSL RVVWLDKPGV DEDKLPSTDI VLTKPLHGSR LFRVLKFTHE TTSRIKIQQH PLVQDVFVDV NKKLPLTGKK
601: ILVVEDDRML LMICRTAVSK LGATVYTCKN GQEALDEVCK GLNEQRDIGS STPSPPFDYI LMDCEMPGMN GFEATKCIRK EEARYGIRIP IIAFTAHTEK
701: EEIDKIFQAG MDYYLPKESK GEEILKVIDY IEHTKVSKMF

Best Arabidopsis Sequence Match ( AT2G47430.1 )
(BLAST)

0001: MMVKVTKLVA SRPIVVFCVL AFLVVVFECI WISNWRTTTE NLVKEVASFT EDLRTSLVSE IENIGKFTYA KTNLSTIGLA RVIDSYITNN DTGFTEIQTQ
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH

Arabidopsis Description

CKI1Histidine kinase CKI1 [Source:UniProtKB/Swiss-Prot;Acc:O22267]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.