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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc06g053710.2.1
Solyc07g056580.2.1
Solyc09g009090.2.1
Solyc09g089610.2.1
Solyc10g083610.1.1
Solyc10g085570.1.1
Solyc12g011330.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04310.1 Solyc06g053710.2.1 AT1G04310.1 18577522
AT1G04310.1 Solyc09g089610.2.1 AT1G04310.1 18577522
AT1G04310.1 Solyc07g056580.2.1 AT1G66340.1 18577522
AT1G04310.1 Solyc12g011330.2.1 AT1G66340.1 18577522
AT3G23150.1 Solyc07g056580.2.1 AT1G66340.1 18577522
AT3G23150.1 Solyc12g011330.2.1 AT1G66340.1 18577522
AT3G23150.1 Solyc09g009090.2.1 AT5G03730.1 12177468
AT3G23150.1 Solyc10g083610.1.1 AT5G03730.1 12177468
AT3G23150.1 Solyc10g085570.1.1 AT5G03730.1 12177468
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400044244 Potato plasma membrane 93.77 93.89
Solyc06g053710.2.1 Tomato plasma membrane 61.14 60.58
VIT_05s0049g00090.t01 Wine grape plasma membrane 57.43 56.68
KRG90373 Soybean plasma membrane 33.55 55.36
KRH34517 Soybean plasma membrane 50.66 51.83
KRG92290 Soybean plasma membrane 51.72 51.18
Solyc06g051610.1.1 Tomato cytosol 11.01 50.0
Solyc11g006180.1.1 Tomato plasma membrane 50.13 49.28
Solyc05g055070.2.1 Tomato plasma membrane 47.61 48.19
GSMUA_Achr11P... Banana plasma membrane 47.88 47.63
CDY35503 Canola plasma membrane 48.94 47.37
Bra023756.1-P Field mustard plasma membrane 48.81 47.18
GSMUA_Achr8P14350_001 Banana endoplasmic reticulum 47.35 47.16
CDY70443 Canola plasma membrane 48.67 47.05
AT3G23150.1 Thale cress endoplasmic reticulum, plasma membrane 48.14 46.96
KRG90374 Soybean cytosol 13.53 45.54
TraesCS2D01G000500.1 Wheat plasma membrane 46.02 44.72
Solyc09g082910.1.1 Tomato cytosol 9.81 44.58
Solyc12g044870.1.1 Tomato cytosol 9.81 44.58
HORVU0Hr1G001750.2 Barley endoplasmic reticulum 45.89 44.53
TraesCS2A01G000200.1 Wheat plasma membrane 45.89 44.47
TraesCS2B01G023800.1 Wheat plasma membrane 45.23 44.34
HORVU2Hr1G000030.1 Barley plasma membrane 45.49 44.26
Os04t0169100-02 Rice plasma membrane 44.56 44.04
EES10426 Sorghum plasma membrane 45.09 43.98
Solyc11g065590.1.1 Tomato cytosol 5.17 43.33
Zm00001d004372_P003 Maize plasma membrane 44.16 43.25
Solyc06g036450.1.1 Tomato cytosol 5.7 43.0
TraesCS6B01G439600.1 Wheat mitochondrion 44.56 42.86
HORVU6Hr1G080170.1 Barley plasma membrane 10.61 42.55
TraesCS6D01G383600.1 Wheat mitochondrion 44.03 42.35
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 36.07 41.72
Zm00001d025050_P001 Maize cytosol, golgi, plasma membrane 44.43 41.67
OQU85974 Sorghum plasma membrane 42.57 41.37
Bra015303.1-P Field mustard endoplasmic reticulum 33.69 41.23
Solyc04g049990.1.1 Tomato cytosol 7.16 41.22
CDY67999 Canola plasma membrane 33.82 41.2
CDY70681 Canola endoplasmic reticulum 33.69 41.17
TraesCS6A01G399400.2 Wheat mitochondrion, plasma membrane 44.03 41.04
Zm00001d051889_P002 Maize endoplasmic reticulum 40.98 40.98
Solyc04g049320.1.1 Tomato cytosol, plastid, vacuole 5.97 40.91
CDX86641 Canola endoplasmic reticulum 31.96 40.5
HORVU6Hr1G091700.6 Barley cytosol, mitochondrion, plasma membrane 44.03 40.39
AT1G04310.1 Thale cress endoplasmic reticulum 33.95 39.69
Os02t0820900-03 Rice mitochondrion 43.77 39.47
TraesCS6B01G360200.1 Wheat cytosol, endoplasmic reticulum, golgi 36.21 37.5
Solyc09g011680.1.1 Tomato cytosol 5.17 37.5
HORVU6Hr1G071860.2 Barley plasma membrane 35.68 37.26
TraesCS6D01G266200.1 Wheat plasma membrane 35.81 37.19
TraesCS6A01G329400.1 Wheat plasma membrane 35.94 37.12
TraesCS6A01G285800.1 Wheat plasma membrane 35.68 36.95
TraesCS6D01G308300.1 Wheat plasma membrane 35.41 36.68
TraesCS6B01G314600.1 Wheat plasma membrane 35.41 36.63
HORVU6Hr1G080180.1 Barley cytosol 24.01 35.98
Solyc12g038690.1.1 Tomato cytosol 3.05 35.94
Solyc04g064840.1.1 Tomato endoplasmic reticulum 8.62 35.91
Solyc01g014770.1.1 Tomato cytosol 6.37 35.82
Solyc12g062760.1.1 Tomato cytosol 4.11 35.23
Solyc07g056580.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 34.22 35.05
Solyc12g011330.2.1 Tomato endoplasmic reticulum, plasma membrane, plastid 34.75 34.75
Solyc04g025660.1.1 Tomato cytosol 4.77 34.62
Os07t0259100-01 Rice mitochondrion, plasma membrane 35.54 34.49
Solyc09g075440.2.1 Tomato plasma membrane 29.05 34.49
Solyc09g065310.1.1 Tomato cytosol 2.92 34.38
Solyc08g068360.1.1 Tomato cytosol 5.44 34.17
Solyc12g027610.1.1 Tomato cytosol 8.62 33.33
Zm00001d053594_P001 Maize plasma membrane 34.75 32.63
EES06508 Sorghum mitochondrion, plasma membrane 35.15 32.04
KXG36402 Sorghum plasma membrane 34.75 30.64
Zm00001d021687_P001 Maize plasma membrane 33.16 29.24
Solyc02g083670.2.1 Tomato cytosol 2.79 28.0
Bra030564.1-P Field mustard plasma membrane 37.4 16.76
CDY15498 Canola plasma membrane 37.67 16.61
Solyc04g008110.2.1 Tomato plasma membrane 18.17 13.8
Solyc05g015610.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 17.64 12.89
Solyc08g068960.2.1 Tomato cytosol 15.52 11.49
Solyc07g047770.2.1 Tomato golgi 17.51 10.69
Solyc12g099720.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 9.42 9.59
Solyc02g083680.1.1 Tomato plastid 10.88 9.33
Protein Annotations
Gene3D:1.10.287.130MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300ProteinID:AAU34078.1
InterPro:CheY-like_superfamilyncoils:CoilInterPro:ETRInterPro:GAFInterPro:GAF-like_dom_sfGO:GO:0000155
GO:GO:0000160GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004673GO:GO:0004871
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0006464GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009873GO:GO:0009987GO:GO:0010105
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0018106
GO:GO:0019538GO:GO:0023014GO:GO:0038023GO:GO:0038199GO:GO:0046872GO:GO:0050896
GO:GO:0051740InterPro:HATPase_C_sfInterPro:HisK_dim/PInterPro:HisK_dim/P_sfInterPro:His_kinase_domInterPro:IPR001789
InterPro:IPR005467InterPro:IPR029016InterPro:IPR036890PFAM:PF00072PFAM:PF00512PFAM:PF01590
PIRSF:PIRSF026389PFscan:PS50109PFscan:PS50110PANTHER:PTHR43719PANTHER:PTHR43719:SF6UniProt:Q5QG21
SMART:SM00065SMART:SM00388SMART:SM00448SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55781
SUPFAM:SSF55874InterPro:Sig_transdc_resp-reg_receiverSignalP:SignalP-TMEnsemblPlantsGene:Solyc09g089610.2EnsemblPlants:Solyc09g089610.2.1TMHMM:TMhelix
UniParc:UPI000049609BSEG:seg::::
Description
Ethylene receptor [Source:UniProtKB/TrEMBL;Acc:Q5QG21]
Coordinates
chr9:+:69357833..69360353
Molecular Weight (calculated)
85085.6 Da
IEP (calculated)
7.534
GRAVY (calculated)
0.115
Length
754 amino acids
Sequence
(BLAST)
001: MMKKVVSWLL FLSIVASLWV VDGYIECPCD DSDAFFSMET MLFVQKAGDL GIAVAYFSIP IEIIYFVSCS SFPFKWVLFQ FGAFIVLCGL THFLTFLTHF
101: GKYTFHLILA LIVCKLLTAL VSMLTAITLM NLIPLLLKAK AREFMLRRKN RELDREVEKI KQLEELGLHV RMLTNEIRKS IDRHTILYTT LVGLSKLLSL
201: QNCVIWMPNE NRTEMKLTHD TTRENVSSVY NVPIPISDRE VKEIKGSDDV KILGADSRLA AASSRGSCEP ESVAAIRIPM LTVSNFRGET REIVSQCYAI
301: LVLVQPCGHG RFWLNQEVEI VRAAADQVAV ALSHAAVVEE SEYIKDRLME QNQALQKARE EALRASQARS SFQTVMSHRL RRPMHSILGL LSMLQEQKLR
401: DEQQLLVHSI IKSSNVVSTL MDDVIVTSTK ENVKFPLEMK HFQLHSLIRE AACTAKSLCM YKGYNITIEV EKSFPNKVMG DERRFFQVLL HIIGNLLNGI
501: HGGHLTFKVL SASENDVSWK TPRSNSSNDI VYIKFEICTK FNRSQSEITP APPTYDTEEI EESLSFAVCR KLVHLMQGDI FIIRNLADFD QGMAVIVGFQ
601: RQPLIPLGMS EYVESSNPTY PHPVLRGVEV LLADYDDSNR AVTKKMLEKL GCIVTLVSSG YECLGAVGPV VSSLQIILLD LHLPDLDGFE VTMRLRKHRR
701: QTWPLIIGLA AITDEDIRKC LKIGMNGIIC KPLLLSGLAD ELQKVLLHAN RGMP
Best Arabidopsis Sequence Match ( AT3G23150.1 )
(BLAST)
001: MVKEIASWLL ILSMVVFVSP VLAINGGGYP RCNCEDEGNS FWSTENILET QRVSDFLIAV AYFSIPIELL YFVSCSNVPF KWVLFEFIAF IVLCGMTHLL
101: HGWTYSAHPF RLMMAFTVFK MLTALVSCAT AITLITLIPL LLKVKVREFM LKKKAHELGR EVGLILIKKE TGFHVRMLTQ EIRKSLDRHT ILYTTLVELS
201: KTLGLQNCAV WMPNDGGTEM DLTHELRGRG GYGGCSVSME DLDVVRIRES DEVNVLSVDS SIARASGGGG DVSEIGAVAA IRMPMLRVSD FNGELSYAIL
301: VCVLPGGTPR DWTYQEIEIV KVVADQVTVA LDHAAVLEES QLMREKLAEQ NRALQMAKRD ALRASQARNA FQKTMSEGMR RPMHSILGLL SMIQDEKLSD
401: EQKMIVDTMV KTGNVMSNLV GDSMDVPDGR FGTEMKPFSL HRTIHEAACM ARCLCLCNGI RFLVDAEKSL PDNVVGDERR VFQVILHIVG SLVKPRKRQE
501: GSSLMFKVLK ERGSLDRSDH RWAAWRSPAS SADGDVYIRF EMNVENDDSS SQSFASVSSR DQEVGDVRFS GGYGLGQDLS FGVCKKVVQL IHGNISVVPG
601: SDGSPETMSL LLRFRRRPSI SVHGSSESPA PDHHAHPHSN SLLRGLQVLL VDTNDSNRAV TRKLLEKLGC DVTAVSSGFD CLTAIAPGSS SPSTSFQVVV
701: LDLQMAEMDG YEVAMRIRSR SWPLIVATTV SLDEEMWDKC AQIGINGVVR KPVVLRAMES ELRRVLLQAD QLL
Arabidopsis Description
ETR2Ethylene receptor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPQ2]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.