Factsheet for Solyc02g083670.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g084410.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17820.1	Solyc06g084410.2.1	AT3G29350.1	10930573

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009219	Potato	plastid	98.67	6.11
AT2G17820.1	Thale cress	cytosol, nucleus, plasma membrane	88.0	5.47
VIT_04s0023g03680.t01	Wine grape	mitochondrion	89.33	5.43
CDY20843	Canola	nucleus	85.33	5.36
Bra002095.1-P	Field mustard	nucleus	85.33	5.36
CDY24380	Canola	nucleus	85.33	5.36
KRH08036	Soybean	plastid	86.67	5.32
KRH28811	Soybean	cytosol, endoplasmic reticulum, nucleus	88.0	5.31
KRH69761	Soybean	plastid	86.67	5.3
KRH76639	Soybean	cytosol, endoplasmic reticulum, plasma membrane	88.0	5.29
Solyc12g099720.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	44.0	4.46
Solyc11g006180.1.1	Tomato	plasma membrane	37.33	3.65
Solyc12g011330.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	32.0	3.18
Solyc06g053710.2.1	Tomato	plasma membrane	32.0	3.15
Solyc07g056580.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	30.67	3.12
Solyc05g055070.2.1	Tomato	plasma membrane	30.67	3.09
Solyc04g008110.2.1	Tomato	plasma membrane	38.67	2.92
Solyc09g089610.2.1	Tomato	endoplasmic reticulum	28.0	2.79
Solyc08g068960.2.1	Tomato	cytosol	34.67	2.55
Solyc05g015610.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	34.67	2.52
Solyc07g047770.2.1	Tomato	golgi	38.67	2.35
Solyc01g014770.1.1	Tomato	cytosol	2.67	1.49
Solyc12g027610.1.1	Tomato	cytosol	2.67	1.03
Solyc02g083680.1.1	Tomato	plastid	4.0	0.34
Solyc04g064840.1.1	Tomato	endoplasmic reticulum	0.0	0.0
Solyc04g025660.1.1	Tomato	cytosol	0.0	0.0
Solyc12g062760.1.1	Tomato	cytosol	0.0	0.0
Solyc12g044870.1.1	Tomato	cytosol	0.0	0.0
Solyc12g038690.1.1	Tomato	cytosol	0.0	0.0
Solyc04g049320.1.1	Tomato	cytosol, plastid, vacuole	0.0	0.0
Solyc11g065590.1.1	Tomato	cytosol	0.0	0.0
Solyc04g049990.1.1	Tomato	cytosol	0.0	0.0
Solyc06g051610.1.1	Tomato	cytosol	0.0	0.0
Solyc09g082910.1.1	Tomato	cytosol	0.0	0.0
Solyc09g075440.2.1	Tomato	plasma membrane	0.0	0.0
Solyc09g065310.1.1	Tomato	cytosol	0.0	0.0
Solyc09g011680.1.1	Tomato	cytosol	0.0	0.0
Solyc08g068360.1.1	Tomato	cytosol	0.0	0.0
Solyc06g036450.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc02g083670.2.1	EnsemblPlantsGene:Solyc02g083670.2	Gene3D:3.40.50.12740	GO:GO:0000160	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	InterPro:CheY-like_superfamily
InterPro:IPR001789	InterPro:Sig_transdc_resp-reg_receiver	PANTHER:PTHR43711	PANTHER:PTHR43711:SF1	PFAM:PF00072	PFscan:PS50110
SUPFAM:SSF52172	UniParc:UPI00027686B7	UniProt:K4BAN5	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2:-:46981841..46982562

Molecular Weight (calculated)

8161.1 Da

IEP (calculated)

8.745

GRAVY (calculated)

-0.129

Length

75 amino acids

Sequence
(BLAST)

1: MDCQMPKMDG YEATKAIRKS EMGTGTHIPI VALTAHAMSS DEAKCLQVGM DAYLTKPIDS KLMVSTILSL TKRKA

Best Arabidopsis Sequence Match ( AT2G17820.1 )
(BLAST)

0001: MRGDSFSMSI ENLPDSPMGS RKKKMQIRKV FDKMTEWVTP WRSNLESPRE MMILRGDVEQ DEFQYASSHC LSSYYSVFVV RLAIMVMLAI LIGLLTVLTW
0101: HFTRIYTKQS LQTLAYGLRY ELLQRPVLRM WSVLNTTSEL TTAQVKLSEY VIKKYDKPTT QEELVEMYQA MKDVTWALFA SAKALNAITI NYRNGFVQAF
0201: HRDPASSSTF YIFSDLKNYS ISGTGPEDVS GWNNKSIHGN MSAIWYQQQL DPVTGENLGK PLKIPPDDLI NIAGISQVPD GEASWHVTVS KYMDSPLLSA
0301: ALPVFDASNK SIVAVVGVTT ALYSVGQLMR DLVEVHGGHI YLTSQEGYLL ATSTDGPLLK NTSNGPQLMK ATDSEEWVIK SGAQWLEKTY GSKRPHVVHA
0401: ENVKLGDQRY YIDSFYLNLK RLPIVGVVII PRKFIMGKVD ERAFKTLIIL ISASVCIFFI GCVCILILTN GVSKEMKLRA ELIRQLDARR RAEASSNYKS
0501: QFLANMSHEL RTPMAAVIGL LDILISDDCL SNEQYATVTQ IRKCSTALLR LLNNILDLSK VESGKLVLEE AEFDLGRELE GLVDMFSVQC INHNVETVLD
0601: LSDDMPALVR GDSARLVQIF ANLISNSIKF TTTGHIILRG WCENINSLHD EMSVSVDRRK PWAPMKTKQV QHRNHLQKSC KNANKMVLWF EVDDTGCGID
0701: PSKWDSVFES FEQADPSTTR THGGTGLGLC IVRNLVNKMG GEIKVVQKNG LGTLMRLYLI LSTPDTVDQN IQPDFSKYGL VVMLSMYGST ARMITSKWLR
0801: KHGIATVEAS DWNELTQIIR DLLETGSRDN SFDSQHNISD PLRAELSNIV EIKNPVFVIV VDIGVLDLTT NIWKEQLNYL DRFSNKAKFA WLLKHDTSNT
0901: VKTELRRKGH VMMVNKPLYK AKMIQILEAV IKNRKRGLCN DLRNRGNGSD ESHDCLEIDP TQFDTCSSDD SSETSGEKQV DKSVKPSTLH SPVLKNYLID
1001: ATTSNDDSTS ASMTQKNPEE EDWKDRLYSG IALDGKNQKS LEGIRILLAE DTPVLQRVAT IMLEKMGATV TAVWDGQQAV DSLNYKSINA QAPTEEHKSF
1101: EEETANKVTT RETSLRNSSP YDLILMDCQM PKMDGYEATK AIRRAEIGTE LHIPIVALTA HAMSSDEAKC LEVGMDAYLT KPIDRKLMVS TILSLTKPSA
1201: FQTSLSA

Arabidopsis Description

AHK1Histidine kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXL4]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.