CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
endoplasmic reticulum 2
nucleus 1
extracellular 1
golgi 1
plasma membrane 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95451
KRH31957
KRH67127
KRH71497

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17820.1	KRG95451	AT3G29350.1	10930573
AT2G17820.1	KRH31957	AT3G29350.1	10930573
AT2G17820.1	KRH67127	AT3G29350.1	10930573
AT2G17820.1	KRH71497	AT3G29350.1	10930573

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08036	Soybean	plastid	94.62	95.0
Solyc02g083670.2.1	Tomato	cytosol	5.3	86.67
KRH28811	Soybean	cytosol, endoplasmic reticulum, nucleus	79.61	78.46
KRH76639	Soybean	cytosol, endoplasmic reticulum, plasma membrane	79.77	78.43
VIT_04s0023g03680.t01	Wine grape	mitochondrion	70.07	69.55
Solyc02g083680.1.1	Tomato	plastid	48.61	67.8
PGSC0003DMT400009219	Potato	plastid	64.19	64.99
CDY20843	Canola	nucleus	62.48	64.21
CDY24380	Canola	nucleus	62.4	64.07
Bra002095.1-P	Field mustard	nucleus	62.23	63.9
AT2G17820.1	Thale cress	cytosol, nucleus, plasma membrane	62.89	63.88
KRG98373	Soybean	extracellular	4.4	30.86
KRG90374	Soybean	cytosol	4.16	22.77
KRH68254	Soybean	cytosol	19.09	22.16
KRH31729	Soybean	endoplasmic reticulum	4.24	21.76
KRH49704	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	16.97	21.07
KRH70376	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	17.13	20.61
KRH42680	Soybean	plasma membrane	17.21	20.49
KRH60456	Soybean	golgi	16.72	20.28
KRH58780	Soybean	endoplasmic reticulum, golgi, plasma membrane	16.97	20.19
KRH41756	Soybean	golgi	16.56	19.98
KRG88576	Soybean	cytosol	13.7	19.91
KRH27542	Soybean	cytosol	11.42	18.94
KRH36433	Soybean	cytosol	11.34	18.78
KRH52290	Soybean	nucleus	14.44	17.75
KRH74010	Soybean	mitochondrion, plasma membrane	17.62	17.69
KRH61623	Soybean	cytosol	14.27	17.68
KRH68220	Soybean	cytosol	9.14	17.61
KRH14106	Soybean	mitochondrion	17.46	17.47
KRG96477	Soybean	cytosol	9.05	17.45
KRG92613	Soybean	plasma membrane	10.2	16.32
KRH68803	Soybean	plasma membrane	10.2	16.28
KRH05331	Soybean	cytosol	13.38	16.22
KRH49494	Soybean	mitochondrion	8.24	16.21
KRH34165	Soybean	plasma membrane	10.11	16.17
KRH15703	Soybean	cytosol	13.3	16.11
KRH34517	Soybean	plasma membrane	9.62	16.01
KRG92290	Soybean	plasma membrane	9.87	15.88
KRG97057	Soybean	plasma membrane	8.89	14.91
KRG90373	Soybean	plasma membrane	3.92	10.5
KRH04719	Soybean	extracellular	0.57	4.83

Protein Annotations

Gene3D:1.10.287.130	EntrezGene:100776856	Gene3D:3.30.565.10	Gene3D:3.40.50.2300	MapMan:35.1	EMBL:ACUP02000729
InterPro:CheY-like_superfamily	EnsemblPlantsGene:GLYMA_02G046600	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824
GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0023014
GO:GO:0038023	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom
UniProt:I1JCF5	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR036890	EnsemblPlants:KRH69761	ProteinID:KRH69761
ProteinID:KRH69761.1	PFAM:PF00072	PFAM:PF00512	PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109
PFscan:PS50110	PANTHER:PTHR43711	PANTHER:PTHR43711:SF1	SMART:SM00387	SMART:SM00388	SMART:SM00448
SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix
UniParc:UPI00023BE92C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:4276605..4283705

Molecular Weight (calculated)

136985.0 Da

IEP (calculated)

8.017

GRAVY (calculated)

-0.248

Length

1226 amino acids

Sequence
(BLAST)

0001: MGIKCIHVFD RLYSFFTCSK KSTMPSGRRI FHRDVEKEEF QYASTQCLSS YYSVFVVRLA IMAMLAILIG LLTFLTWHFT KIYTTKSLNS LAYDLRYELL
0101: QRPILRMWNI LNSTAEITTA QVKLSQYVIR KHTNFATQAD QVEMYEAMRA VTWALFAGKK ALNSITVKYK NGFVQAFHRD LKDNNTFYIY SDLANYSMAA
0201: SGYNEINSRS SREAWNDKDI HGHKPAIWYR EPLDPISGEK IGKVRPIAPE DSINIAGLSQ VPDGVASWHV AVSKFTDSPL LSAALPVWDS SNKSIEAVVG
0301: VTTALYSVGQ LMKELVEKHS GHMYLTSQEG YLLATSTNAP LLSNSTKPPK LKMAVECQNE VIREGAQWLQ KTYGNNFPQS HELHVENVRL GRQQYYIDSF
0401: FLNLKRLPLV GVIIIPRKHI MGQADERAFK TLVILISASL CIIVIGCVCI LILTNGVSKE MKLRAELISH LEARRKAEAS SNYKSQFLAN MSHELRTPMA
0501: AVIGLLDILI SDDRLTNEQC ATVTQIRKCS TALLRLLNNI LDLSKVESGK LVLEDAEFDL GRELEGLVDM FSVQCINHNV ETVLDLSDDM PKLVRGDSAR
0601: VVQIFANLIN NSIKFTLSGH IVLRGWCENP NSCSDNTNFP LEQKKLRCSQ KTRAKQHENH AKRTSNRDNK MILWFEVDDT GCGIDPSKWE SVFESFEQAD
0701: PSTTRLHGGT GLGLCIVRTL VNKMGGEIKV VKKEGSGTLM RLCLRLSAPV DATEQHCQVD FANKGLVVLL ALHGNMGRSA TSKWLQKNGV VTMEAAEWNG
0801: LTQILRVLFH ARSSAHNNGF DANYSVHDNL KSRLLSIQEL RNPVFVIAVD IGLLDLSTDI WKEQLNFLHK YFGRAKFVWI LNHDSSNTMK MDLCRKGHTL
0901: TVNKPLYKTK MIHILESIIK DRNEELQKKN MTTLRATVKE GNLHESLEID YTQCDVASSD GSDISETGGS NPVSARGDKQ REKVVRSDPS SQHQINNLVG
1001: LTNECMEDDN HRKEELCQSS LNSNDVTANA SPKSSSTKQA SFATGARDGD SEYGETRKAS SSSRAVSGKK SLEGLRILLA EDTPVIQRVA TIMLEKMGAI
1101: VVAVGDGRQA VDALNGMSGV EDCRRETLLK ERNTRSSQTE ILSCPPYDLI LMDCQMPKMD GYEATKAIRK SEEGTGLHIP IVALTAHAMS CDEAKCLEVG
1201: MDAYLTKPID FKLMESTILS LTRGTS

Best Arabidopsis Sequence Match ( AT2G17820.1 )
(BLAST)

0001: MRGDSFSMSI ENLPDSPMGS RKKKMQIRKV FDKMTEWVTP WRSNLESPRE MMILRGDVEQ DEFQYASSHC LSSYYSVFVV RLAIMVMLAI LIGLLTVLTW
0101: HFTRIYTKQS LQTLAYGLRY ELLQRPVLRM WSVLNTTSEL TTAQVKLSEY VIKKYDKPTT QEELVEMYQA MKDVTWALFA SAKALNAITI NYRNGFVQAF
0201: HRDPASSSTF YIFSDLKNYS ISGTGPEDVS GWNNKSIHGN MSAIWYQQQL DPVTGENLGK PLKIPPDDLI NIAGISQVPD GEASWHVTVS KYMDSPLLSA
0301: ALPVFDASNK SIVAVVGVTT ALYSVGQLMR DLVEVHGGHI YLTSQEGYLL ATSTDGPLLK NTSNGPQLMK ATDSEEWVIK SGAQWLEKTY GSKRPHVVHA
0401: ENVKLGDQRY YIDSFYLNLK RLPIVGVVII PRKFIMGKVD ERAFKTLIIL ISASVCIFFI GCVCILILTN GVSKEMKLRA ELIRQLDARR RAEASSNYKS
0501: QFLANMSHEL RTPMAAVIGL LDILISDDCL SNEQYATVTQ IRKCSTALLR LLNNILDLSK VESGKLVLEE AEFDLGRELE GLVDMFSVQC INHNVETVLD
0601: LSDDMPALVR GDSARLVQIF ANLISNSIKF TTTGHIILRG WCENINSLHD EMSVSVDRRK PWAPMKTKQV QHRNHLQKSC KNANKMVLWF EVDDTGCGID
0701: PSKWDSVFES FEQADPSTTR THGGTGLGLC IVRNLVNKMG GEIKVVQKNG LGTLMRLYLI LSTPDTVDQN IQPDFSKYGL VVMLSMYGST ARMITSKWLR
0801: KHGIATVEAS DWNELTQIIR DLLETGSRDN SFDSQHNISD PLRAELSNIV EIKNPVFVIV VDIGVLDLTT NIWKEQLNYL DRFSNKAKFA WLLKHDTSNT
0901: VKTELRRKGH VMMVNKPLYK AKMIQILEAV IKNRKRGLCN DLRNRGNGSD ESHDCLEIDP TQFDTCSSDD SSETSGEKQV DKSVKPSTLH SPVLKNYLID
1001: ATTSNDDSTS ASMTQKNPEE EDWKDRLYSG IALDGKNQKS LEGIRILLAE DTPVLQRVAT IMLEKMGATV TAVWDGQQAV DSLNYKSINA QAPTEEHKSF
1101: EEETANKVTT RETSLRNSSP YDLILMDCQM PKMDGYEATK AIRRAEIGTE LHIPIVALTA HAMSSDEAKC LEVGMDAYLT KPIDRKLMVS TILSLTKPSA
1201: FQTSLSA

Arabidopsis Description

AHK1Histidine kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXL4]
SUBAcon: [cytosol,nucleus,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.