Factsheet for Solyc02g083680.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g084410.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17820.1	Solyc06g084410.2.1	AT3G29350.1	10930573

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009219	Potato	plastid	97.72	70.93
VIT_04s0023g03680.t01	Wine grape	mitochondrion	74.18	52.79
CDY20843	Canola	nucleus	66.78	49.2
CDY24380	Canola	nucleus	66.55	48.99
Bra002095.1-P	Field mustard	nucleus	66.21	48.74
KRH08036	Soybean	plastid	67.69	48.73
KRH69761	Soybean	plastid	67.8	48.61
KRH76639	Soybean	cytosol, endoplasmic reticulum, plasma membrane	68.94	48.6
KRH28811	Soybean	cytosol, endoplasmic reticulum, nucleus	68.71	48.55
AT2G17820.1	Thale cress	cytosol, nucleus, plasma membrane	65.98	48.05
Solyc12g038690.1.1	Tomato	cytosol	2.05	28.12
Solyc09g065310.1.1	Tomato	cytosol	1.93	26.56
Solyc09g011680.1.1	Tomato	cytosol	2.84	24.04
Solyc04g049320.1.1	Tomato	cytosol, plastid, vacuole	2.96	23.64
Solyc12g062760.1.1	Tomato	cytosol	2.28	22.73
Solyc06g051610.1.1	Tomato	cytosol	4.1	21.69
Solyc09g082910.1.1	Tomato	cytosol	4.1	21.69
Solyc04g064840.1.1	Tomato	endoplasmic reticulum	4.44	21.55
Solyc04g025660.1.1	Tomato	cytosol	2.5	21.15
Solyc06g036450.1.1	Tomato	cytosol	2.39	21.0
Solyc11g065590.1.1	Tomato	cytosol	2.05	20.0
Solyc12g044870.1.1	Tomato	cytosol	3.75	19.88
Solyc12g027610.1.1	Tomato	cytosol	4.32	19.49
Solyc08g068360.1.1	Tomato	cytosol	2.62	19.17
Solyc09g075440.2.1	Tomato	plasma membrane	12.29	17.01
Solyc12g099720.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	13.54	16.08
Solyc04g008110.2.1	Tomato	plasma membrane	17.52	15.51
Solyc05g015610.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	17.52	14.92
Solyc04g049990.1.1	Tomato	cytosol	2.16	14.5
Solyc12g011330.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	11.83	13.79
Solyc07g056580.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	11.49	13.72
Solyc07g047770.2.1	Tomato	golgi	17.63	12.55
Solyc08g068960.2.1	Tomato	cytosol	13.65	11.79
Solyc06g053710.2.1	Tomato	plasma membrane	9.9	11.43
Solyc01g014770.1.1	Tomato	cytosol	1.71	11.19
Solyc09g089610.2.1	Tomato	endoplasmic reticulum	9.33	10.88
Solyc11g006180.1.1	Tomato	plasma membrane	9.22	10.56
Solyc05g055070.2.1	Tomato	plasma membrane	8.42	9.93
Solyc02g083670.2.1	Tomato	cytosol	0.34	4.0

Protein Annotations

Gene3D:1.10.287.130	Gene3D:3.30.565.10	MapMan:35.1	GO:GO:0000003	GO:GO:0000155	GO:GO:0000160
GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005034	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006970	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009414	GO:GO:0009628
GO:GO:0009791	GO:GO:0009927	GO:GO:0009987	GO:GO:0010375	GO:GO:0010431	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538
GO:GO:0023014	GO:GO:0038023	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf
InterPro:His_kinase_dom	InterPro:IPR005467	InterPro:IPR036890	UniProt:K4BAN6	PFAM:PF00512	PFAM:PF02518
PRINTS:PR00344	PFscan:PS50109	PANTHER:PTHR43711	PANTHER:PTHR43711:SF1	SMART:SM00387	SMART:SM00388
SUPFAM:SSF47384	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	EnsemblPlantsGene:Solyc02g083680.1	EnsemblPlants:Solyc02g083680.1.1	TMHMM:TMhelix
UniParc:UPI00027686B8	SEG:seg	:	:	:	:

Description

Histidine kinase 1 [Source:Projected from Arabidopsis thaliana (AT2G17820) UniProtKB/Swiss-Prot;Acc:Q9SXL4]

Coordinates

chr2:-:46983122..46987362

Molecular Weight (calculated)

98129.7 Da

IEP (calculated)

7.651

GRAVY (calculated)

-0.096

Length

879 amino acids

Sequence
(BLAST)

001: MAHNKATYGT TTTLSIESSS PPITPKGSLP ERILSKMLGF ADFSKRNQSP SRSGSGTPRN YQVDEELPFD SSICHSSYRG VFVVRLAIMV MLAILIGMLT
101: LLTWHFTRVY TTKSLNTLAF GLRHELLQRP ILRMWNILNS TVEITTAQVK LSEYVIRKYS KPVDQAQQVE QLYESMKDVT WALFASRKAL NSLTINYKNG
201: FVQAFHRDHR SNNTFYIYSD LANYSISNTY DVNLLSSRQG WNDQTIHNNI SAIWYREPLD PSTGERNGKR SIIPPDELIN IAGISQVPDG AASWHVAVSK
301: YTDSPLLSAA LPVWDPSNKS IVAVVGVTTA LYSVGQLMKE IVEFHSGHIY LTSQEGWLLA TSTNSPLLMN TTKGPKLMMA IDSEDPVIRS GAECLQKDYG
401: KRLTPSQEVH IENAKLGNQL YYIDSFYLQL KRLPMVGVII IPRKYIMGKV DERAIKTLVI LISASICILI IGCVCIFVLT DGVSKEMKLR AELISQLDAR
501: RKAEASSNYK SQFLANMSHE LRTPMAAVIG LLDILISDGF LTNEQYATIT QIRKCSTALL RLLNNILDLS KVESGKLVLE ETEFDLAREL EGLVDMFSVQ
601: CINHNVETVL DLSDDMPKLV KGDSARVVQI FANLISNSLK FTTSGYIILR GWCGSARGGN FPLNQKDSWS APKVKLKRQE SQGKKFSKKD NKMILWFEVE
701: DSGCGIDPSK WESVFESFEQ ADPSTTRLHG GTGLGLCIVR TLVNKMGGEI KVVKKNGPGT VMQLCLQLNC PAEVAGQHFQ FSFEEHKMRV LLALNGKMGR
801: VIMSQWLERN GVHTWGASDW NELTQILQGI SISRCHLKDT TCECLEPEDL SIQDPDASSP FVIVVDIGIL DLICMDSLP

Best Arabidopsis Sequence Match ( AT2G17820.1 )
(BLAST)

0001: MRGDSFSMSI ENLPDSPMGS RKKKMQIRKV FDKMTEWVTP WRSNLESPRE MMILRGDVEQ DEFQYASSHC LSSYYSVFVV RLAIMVMLAI LIGLLTVLTW
0101: HFTRIYTKQS LQTLAYGLRY ELLQRPVLRM WSVLNTTSEL TTAQVKLSEY VIKKYDKPTT QEELVEMYQA MKDVTWALFA SAKALNAITI NYRNGFVQAF
0201: HRDPASSSTF YIFSDLKNYS ISGTGPEDVS GWNNKSIHGN MSAIWYQQQL DPVTGENLGK PLKIPPDDLI NIAGISQVPD GEASWHVTVS KYMDSPLLSA
0301: ALPVFDASNK SIVAVVGVTT ALYSVGQLMR DLVEVHGGHI YLTSQEGYLL ATSTDGPLLK NTSNGPQLMK ATDSEEWVIK SGAQWLEKTY GSKRPHVVHA
0401: ENVKLGDQRY YIDSFYLNLK RLPIVGVVII PRKFIMGKVD ERAFKTLIIL ISASVCIFFI GCVCILILTN GVSKEMKLRA ELIRQLDARR RAEASSNYKS
0501: QFLANMSHEL RTPMAAVIGL LDILISDDCL SNEQYATVTQ IRKCSTALLR LLNNILDLSK VESGKLVLEE AEFDLGRELE GLVDMFSVQC INHNVETVLD
0601: LSDDMPALVR GDSARLVQIF ANLISNSIKF TTTGHIILRG WCENINSLHD EMSVSVDRRK PWAPMKTKQV QHRNHLQKSC KNANKMVLWF EVDDTGCGID
0701: PSKWDSVFES FEQADPSTTR THGGTGLGLC IVRNLVNKMG GEIKVVQKNG LGTLMRLYLI LSTPDTVDQN IQPDFSKYGL VVMLSMYGST ARMITSKWLR
0801: KHGIATVEAS DWNELTQIIR DLLETGSRDN SFDSQHNISD PLRAELSNIV EIKNPVFVIV VDIGVLDLTT NIWKEQLNYL DRFSNKAKFA WLLKHDTSNT
0901: VKTELRRKGH VMMVNKPLYK AKMIQILEAV IKNRKRGLCN DLRNRGNGSD ESHDCLEIDP TQFDTCSSDD SSETSGEKQV DKSVKPSTLH SPVLKNYLID
1001: ATTSNDDSTS ASMTQKNPEE EDWKDRLYSG IALDGKNQKS LEGIRILLAE DTPVLQRVAT IMLEKMGATV TAVWDGQQAV DSLNYKSINA QAPTEEHKSF
1101: EEETANKVTT RETSLRNSSP YDLILMDCQM PKMDGYEATK AIRRAEIGTE LHIPIVALTA HAMSSDEAKC LEVGMDAYLT KPIDRKLMVS TILSLTKPSA
1201: FQTSLSA

Arabidopsis Description

AHK1Histidine kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXL4]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.