Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc07g056580.2.1 | |
| Solyc12g011330.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04580.1 | Solyc07g056580.2.1 | AT1G66340.1 | 18577522 |
| AT3G04580.1 | Solyc12g011330.2.1 | AT1G66340.1 | 18577522 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g065590.1.1 | Tomato | cytosol | 62.0 | 68.89 |
| Solyc09g011680.1.1 | Tomato | cytosol | 63.0 | 60.58 |
| Solyc12g062760.1.1 | Tomato | cytosol | 51.0 | 57.95 |
| Solyc04g025660.1.1 | Tomato | cytosol | 59.0 | 56.73 |
| Solyc12g044870.1.1 | Tomato | cytosol | 94.0 | 56.63 |
| Solyc09g082910.1.1 | Tomato | cytosol | 92.0 | 55.42 |
| Solyc12g038690.1.1 | Tomato | cytosol | 34.0 | 53.12 |
| Solyc06g051610.1.1 | Tomato | cytosol | 87.0 | 52.41 |
| Solyc08g068360.1.1 | Tomato | cytosol | 62.0 | 51.67 |
| Solyc09g065310.1.1 | Tomato | cytosol | 33.0 | 51.56 |
| Solyc01g014770.1.1 | Tomato | cytosol | 50.0 | 37.31 |
| Solyc04g049320.1.1 | Tomato | cytosol, plastid, vacuole | 41.0 | 37.27 |
| Solyc04g049990.1.1 | Tomato | cytosol | 45.0 | 34.35 |
| Solyc04g064840.1.1 | Tomato | endoplasmic reticulum | 60.0 | 33.15 |
| Solyc12g027610.1.1 | Tomato | cytosol | 59.0 | 30.26 |
| Solyc05g055070.2.1 | Tomato | plasma membrane | 85.0 | 11.41 |
| Solyc11g006180.1.1 | Tomato | plasma membrane | 72.0 | 9.39 |
| VIT_14s0081g00630.t01 | Wine grape | plasma membrane | 62.0 | 8.16 |
| HORVU6Hr1G080180.1 | Barley | cytosol | 41.0 | 8.15 |
| KRG92613 | Soybean | plasma membrane | 62.0 | 8.09 |
| KRH34165 | Soybean | plasma membrane | 62.0 | 8.08 |
| Bra040134.1-P | Field mustard | plasma membrane | 57.0 | 7.44 |
| CDY30004 | Canola | plasma membrane | 57.0 | 7.44 |
| KRG97057 | Soybean | plasma membrane | 54.0 | 7.39 |
| AT3G04580.1 | Thale cress | plasma membrane | 56.0 | 7.31 |
| GSMUA_Achr8P14350_001 | Banana | endoplasmic reticulum | 55.0 | 7.27 |
| GSMUA_Achr11P... | Banana | plasma membrane | 55.0 | 7.26 |
| Solyc06g053710.2.1 | Tomato | plasma membrane | 54.0 | 7.1 |
| Os04t0169100-02 | Rice | plasma membrane | 53.0 | 6.95 |
| KRH68803 | Soybean | plasma membrane | 53.0 | 6.9 |
| TraesCS2B01G023800.1 | Wheat | plasma membrane | 50.0 | 6.5 |
| Zm00001d004372_P003 | Maize | plasma membrane | 50.0 | 6.49 |
| TraesCS2D01G000500.1 | Wheat | plasma membrane | 50.0 | 6.44 |
| TraesCS2A01G000200.1 | Wheat | plasma membrane | 50.0 | 6.43 |
| EES10426 | Sorghum | plasma membrane | 49.0 | 6.34 |
| HORVU2Hr1G000030.1 | Barley | plasma membrane | 49.0 | 6.32 |
| OQU85974 | Sorghum | plasma membrane | 49.0 | 6.31 |
| HORVU0Hr1G001750.2 | Barley | endoplasmic reticulum | 49.0 | 6.31 |
| Zm00001d025050_P001 | Maize | cytosol, golgi, plasma membrane | 50.0 | 6.22 |
| TraesCS6B01G439600.1 | Wheat | mitochondrion | 48.0 | 6.12 |
| TraesCS6D01G383600.1 | Wheat | mitochondrion | 48.0 | 6.12 |
| Zm00001d051889_P002 | Maize | endoplasmic reticulum | 45.0 | 5.97 |
| TraesCS6A01G399400.2 | Wheat | mitochondrion, plasma membrane | 48.0 | 5.93 |
| TraesCS6D01G266200.1 | Wheat | plasma membrane | 43.0 | 5.92 |
| TraesCS6A01G285800.1 | Wheat | plasma membrane | 43.0 | 5.91 |
| TraesCS6B01G360200.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 43.0 | 5.91 |
| Os02t0820900-03 | Rice | mitochondrion | 49.0 | 5.86 |
| TraesCS6D01G308300.1 | Wheat | plasma membrane | 42.0 | 5.77 |
| TraesCS6B01G314600.1 | Wheat | plasma membrane | 42.0 | 5.76 |
| TraesCS6A01G329400.1 | Wheat | plasma membrane | 42.0 | 5.75 |
| HORVU6Hr1G091700.6 | Barley | cytosol, mitochondrion, plasma membrane | 47.0 | 5.72 |
| Solyc09g089610.2.1 | Tomato | endoplasmic reticulum | 43.0 | 5.7 |
| HORVU6Hr1G071860.2 | Barley | plasma membrane | 41.0 | 5.68 |
| Solyc09g075440.2.1 | Tomato | plasma membrane | 34.0 | 5.35 |
| Os07t0259100-01 | Rice | mitochondrion, plasma membrane | 41.0 | 5.28 |
| Solyc12g011330.2.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 39.0 | 5.17 |
| Solyc07g056580.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 37.0 | 5.03 |
| KXG36402 | Sorghum | plasma membrane | 42.0 | 4.91 |
| Zm00001d053594_P001 | Maize | plasma membrane | 39.0 | 4.86 |
| EES06508 | Sorghum | mitochondrion, plasma membrane | 40.0 | 4.84 |
| Zm00001d021687_P001 | Maize | plasma membrane | 41.0 | 4.8 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 29.0 | 4.45 |
| Solyc02g083680.1.1 | Tomato | plastid | 21.0 | 2.39 |
| Solyc12g099720.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 13.0 | 1.76 |
| Solyc05g015610.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 18.0 | 1.74 |
| Solyc04g008110.2.1 | Tomato | plasma membrane | 17.0 | 1.71 |
| Solyc07g047770.2.1 | Tomato | golgi | 18.0 | 1.46 |
| Solyc08g068960.2.1 | Tomato | cytosol | 14.0 | 1.38 |
| HORVU6Hr1G080170.1 | Barley | plasma membrane | 0.0 | 0.0 |
| KRG98373 | Soybean | extracellular | 0.0 | 0.0 |
| CDY21123 | Canola | cytosol | 0.0 | 0.0 |
| Solyc02g083670.2.1 | Tomato | cytosol | 0.0 | 0.0 |
| CDY64702 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc06g036450.1.1 | EnsemblPlantsGene:Solyc06g036450.1 | Gene3D:1.10.287.130 | ncoils:Coil | PANTHER:PTHR44764 | SEG:seg |
| UniParc:UPI000276612D | UniProt:K4C511 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6:-:26001329..26001631
Molecular Weight (calculated)
11436.0 Da
IEP (calculated)
7.703
GRAVY (calculated)
-0.121
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MEIVEVVVDQ VIVALSHATV LEELMREKLE ARNGLQQQAK ENVVKASQTR YSFQNLMNNG MRRPMHSIFG LLSILQDENT STNKKIIFDT MVRMSTVLLN
001: MVKEIASWLL ILSMVVFVSP VLAINGGGYP RCNCEDEGNS FWSTENILET QRVSDFLIAV AYFSIPIELL YFVSCSNVPF KWVLFEFIAF IVLCGMTHLL
101: HGWTYSAHPF RLMMAFTVFK MLTALVSCAT AITLITLIPL LLKVKVREFM LKKKAHELGR EVGLILIKKE TGFHVRMLTQ EIRKSLDRHT ILYTTLVELS
201: KTLGLQNCAV WMPNDGGTEM DLTHELRGRG GYGGCSVSME DLDVVRIRES DEVNVLSVDS SIARASGGGG DVSEIGAVAA IRMPMLRVSD FNGELSYAIL
301: VCVLPGGTPR DWTYQEIEIV KVVADQVTVA LDHAAVLEES QLMREKLAEQ NRALQMAKRD ALRASQARNA FQKTMSEGMR RPMHSILGLL SMIQDEKLSD
401: EQKMIVDTMV KTGNVMSNLV GDSMDVPDGR FGTEMKPFSL HRTIHEAACM ARCLCLCNGI RFLVDAEKSL PDNVVGDERR VFQVILHIVG SLVKPRKRQE
501: GSSLMFKVLK ERGSLDRSDH RWAAWRSPAS SADGDVYIRF EMNVENDDSS SQSFASVSSR DQEVGDVRFS GGYGLGQDLS FGVCKKVVQV SFLTYLFLKF
601: LSLV
101: HGWTYSAHPF RLMMAFTVFK MLTALVSCAT AITLITLIPL LLKVKVREFM LKKKAHELGR EVGLILIKKE TGFHVRMLTQ EIRKSLDRHT ILYTTLVELS
201: KTLGLQNCAV WMPNDGGTEM DLTHELRGRG GYGGCSVSME DLDVVRIRES DEVNVLSVDS SIARASGGGG DVSEIGAVAA IRMPMLRVSD FNGELSYAIL
301: VCVLPGGTPR DWTYQEIEIV KVVADQVTVA LDHAAVLEES QLMREKLAEQ NRALQMAKRD ALRASQARNA FQKTMSEGMR RPMHSILGLL SMIQDEKLSD
401: EQKMIVDTMV KTGNVMSNLV GDSMDVPDGR FGTEMKPFSL HRTIHEAACM ARCLCLCNGI RFLVDAEKSL PDNVVGDERR VFQVILHIVG SLVKPRKRQE
501: GSSLMFKVLK ERGSLDRSDH RWAAWRSPAS SADGDVYIRF EMNVENDDSS SQSFASVSSR DQEVGDVRFS GGYGLGQDLS FGVCKKVVQV SFLTYLFLKF
601: LSLV
Arabidopsis Description
ETR2Ethylene receptor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPQ2]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.