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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 6
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY07498
CDY49629
CDY49633
CDY66567

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G04580.1 CDY07498 AT1G66340.1 18577522
AT3G04580.1 CDY49629 AT1G66340.1 18577522
AT3G04580.1 CDY49633 AT1G66340.1 18577522
AT3G04580.1 CDY66567 AT1G66340.1 18577522
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21123 Canola cytosol 39.03 99.67
Bra040134.1-P Field mustard plasma membrane 99.48 99.48
AT3G04580.1 Thale cress plasma membrane 94.26 94.26
CDY64702 Canola mitochondrion 15.27 89.31
VIT_14s0081g00630.t01 Wine grape plasma membrane 65.14 65.66
Solyc06g051610.1.1 Tomato cytosol 13.84 63.86
PGSC0003DMT400073847 Potato plasma membrane 62.14 62.06
Solyc11g006180.1.1 Tomato plasma membrane 61.23 61.15
KRG98373 Soybean extracellular 13.97 61.14
KRH68803 Soybean plasma membrane 61.23 61.07
KRG92613 Soybean plasma membrane 60.97 60.97
KRG97057 Soybean plasma membrane 57.96 60.74
KRH34165 Soybean plasma membrane 60.7 60.63
Solyc05g055070.2.1 Tomato plasma membrane 58.49 60.13
PGSC0003DMT400060160 Potato endoplasmic reticulum 59.79 60.03
Solyc12g044870.1.1 Tomato cytosol 12.53 57.83
Solyc11g065590.1.1 Tomato cytosol 6.79 57.78
Solyc06g036450.1.1 Tomato cytosol 7.44 57.0
Solyc09g082910.1.1 Tomato cytosol 12.27 56.63
Solyc04g049320.1.1 Tomato cytosol, plastid, vacuole 8.09 56.36
Solyc09g011680.1.1 Tomato cytosol 7.44 54.81
Solyc12g038690.1.1 Tomato cytosol 4.57 54.69
Solyc12g062760.1.1 Tomato cytosol 6.27 54.55
Solyc01g014770.1.1 Tomato cytosol 9.53 54.48
Solyc04g049990.1.1 Tomato cytosol 9.27 54.2
CDY70443 Canola plasma membrane 54.83 53.85
CDY35503 Canola plasma membrane 54.31 53.4
Solyc04g025660.1.1 Tomato cytosol 7.18 52.88
GSMUA_Achr11P... Banana plasma membrane 52.22 52.77
Solyc09g065310.1.1 Tomato cytosol 4.31 51.56
GSMUA_Achr8P14350_001 Banana endoplasmic reticulum 50.13 50.73
Os04t0169100-02 Rice plasma membrane 49.09 49.28
TraesCS2B01G023800.1 Wheat plasma membrane 49.22 49.02
EES10426 Sorghum plasma membrane 49.35 48.9
TraesCS2D01G000500.1 Wheat plasma membrane 49.48 48.84
TraesCS2A01G000200.1 Wheat plasma membrane 49.35 48.59
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 41.25 48.47
HORVU0Hr1G001750.2 Barley endoplasmic reticulum 48.56 47.88
Zm00001d004372_P003 Maize plasma membrane 48.04 47.79
HORVU2Hr1G000030.1 Barley plasma membrane 47.91 47.35
Solyc04g064840.1.1 Tomato endoplasmic reticulum 11.1 46.96
Zm00001d025050_P001 Maize cytosol, golgi, plasma membrane 49.09 46.77
Zm00001d051889_P002 Maize endoplasmic reticulum 45.95 46.68
Solyc08g068360.1.1 Tomato cytosol 7.31 46.67
TraesCS6B01G439600.1 Wheat mitochondrion 47.65 46.56
TraesCS6D01G383600.1 Wheat mitochondrion 47.52 46.43
OQU85974 Sorghum plasma membrane 46.87 46.26
CDX86641 Canola endoplasmic reticulum 35.64 45.88
CDY67999 Canola plasma membrane 36.42 45.07
CDY70681 Canola endoplasmic reticulum 36.29 45.06
TraesCS6A01G399400.2 Wheat mitochondrion, plasma membrane 47.39 44.87
HORVU6Hr1G091700.6 Barley cytosol, mitochondrion, plasma membrane 47.52 44.28
HORVU6Hr1G080170.1 Barley plasma membrane 10.84 44.15
Solyc12g027610.1.1 Tomato cytosol 11.23 44.1
Os02t0820900-03 Rice mitochondrion 46.48 42.58
TraesCS6B01G360200.1 Wheat cytosol, endoplasmic reticulum, golgi 38.51 40.52
TraesCS6D01G266200.1 Wheat plasma membrane 38.25 40.36
TraesCS6A01G285800.1 Wheat plasma membrane 38.12 40.11
TraesCS6A01G329400.1 Wheat plasma membrane 37.99 39.86
TraesCS6D01G308300.1 Wheat plasma membrane 37.86 39.84
TraesCS6B01G314600.1 Wheat plasma membrane 37.73 39.64
HORVU6Hr1G071860.2 Barley plasma membrane 36.95 39.2
Os07t0259100-01 Rice mitochondrion, plasma membrane 39.16 38.61
HORVU6Hr1G080180.1 Barley cytosol 25.33 38.57
CDY07498 Canola cytosol 36.03 37.5
CDY49633 Canola cytosol 35.9 37.41
CDY49629 Canola cytosol 6.53 35.97
CDX80113 Canola plasma membrane 28.59 35.73
Zm00001d053594_P001 Maize plasma membrane 36.68 34.99
CDY63851 Canola plasma membrane 28.46 34.99
EES06508 Sorghum mitochondrion, plasma membrane 36.95 34.22
CDY66567 Canola cytosol 6.4 33.56
KXG36402 Sorghum plasma membrane 35.9 32.16
Zm00001d021687_P001 Maize plasma membrane 34.73 31.11
CDY03102 Canola cytosol 1.96 20.83
CDY03106 Canola cytosol 1.96 20.83
CDY15498 Canola plasma membrane 41.91 18.77
CDY03101 Canola cytosol, peroxisome, plasma membrane 19.71 14.35
CDY17631 Canola cytosol, peroxisome, plasma membrane 19.58 14.26
CDY03909 Canola endoplasmic reticulum, golgi, plasma membrane 18.28 13.99
CDY15717 Canola endoplasmic reticulum, golgi, plasma membrane 18.54 13.91
CDX97049 Canola nucleus 16.06 13.73
CDX69808 Canola nucleus 16.06 13.7
CDX90318 Canola cytosol 5.48 13.64
CDY67688 Canola nucleus 16.06 13.5
CDY40112 Canola nucleus 15.93 13.32
CDX93074 Canola plasma membrane 18.8 13.13
CDY50037 Canola endoplasmic reticulum, golgi, plasma membrane 18.67 13.01
CDY47297 Canola plasma membrane 19.45 12.97
CDX74635 Canola cytosol, golgi, plasma membrane 19.19 12.79
CDX78398 Canola cytosol 10.18 12.42
CDX78397 Canola cytosol 5.48 10.91
CDY20843 Canola nucleus 16.97 10.9
CDY24380 Canola nucleus 16.97 10.89
CDY01193 Canola endoplasmic reticulum, golgi, plasma membrane 13.19 9.46
CDY12735 Canola endoplasmic reticulum, golgi, plasma membrane 12.66 9.11
CDY55381 Canola endoplasmic reticulum, plasma membrane, plastid 13.45 9.02
CDX80103 Canola endoplasmic reticulum, golgi, plasma membrane 12.92 8.89
CDX70367 Canola endoplasmic reticulum, golgi 15.93 8.89
Protein Annotations
Gene3D:1.10.287.130MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300GO:A0A078GY21
UniProt:A0A078GY21EnsemblPlants:CDY30004ProteinID:CDY30004ProteinID:CDY30004.1InterPro:CheY-like_superfamilyInterPro:ETR
InterPro:GAFInterPro:GAF-like_dom_sfGO:GO:0000155GO:GO:0000160GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004673GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0006464GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719
GO:GO:0009873GO:GO:0009987GO:GO:0010105GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0018106GO:GO:0019538GO:GO:0023014GO:GO:0038023
GO:GO:0038199GO:GO:0046872GO:GO:0050896GO:GO:0051740EnsemblPlantsGene:GSBRNA2T00044533001InterPro:HATPase_C
InterPro:HATPase_C_sfInterPro:HisK_dim/PInterPro:HisK_dim/P_sfInterPro:His_kinase_domInterPro:IPR001789InterPro:IPR005467
InterPro:IPR029016InterPro:IPR036890PFAM:PF00072PFAM:PF01590PFAM:PF02518PIRSF:PIRSF026389
PFscan:PS50109PFscan:PS50110PANTHER:PTHR43719PANTHER:PTHR43719:SF6SMART:SM00065SMART:SM00388
SMART:SM00448SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55781SUPFAM:SSF55874InterPro:Sig_transdc_resp-reg_receiver
SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EEECD5SEG:seg::
Description
BnaC01g40040DBnaC01g40040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY21]
Coordinates
chrLK032247:-:412429..415851
Molecular Weight (calculated)
86238.0 Da
IEP (calculated)
8.366
GRAVY (calculated)
0.026
Length
766 amino acids
Sequence
(BLAST)
001: MLRSLGLGLL LFALIALVTG DNNDYGSCNC DDEGYYFFTV HTILECQRVS DLLIAIAYFS IPLELLYFIS FSNVPFKWVL VQFIAFIVLC GMTHLLNAWT
101: YYGPHSFQLM LWLTIFKFLT ALVSCATAIT LLTLIPLLLK WKVRELYLKQ NVLELNEEVG LMKRQKEMSV HVRMLTREIR KSLDKHMILR TTLVELSKIL
201: DLQNSAVWMP NESRTEMHLT HELRSNSMRS FRVVPINDPD VVQVREAKVV AILRKDSLLA IESSGSDESG PVAAIRMPML HGSNFKGGTP EFVDTSYAIM
301: VLVLPNANSR VWTDREIEIA EVVADQVAVA LSHASVLEES QLMREKLGIQ NRALLRAKQN AMMASQARNT CQKVMSHGMR RPMHTILGLL SMFQSESMSL
401: DQKIIVDALM KTSTVLSALI NDVIDISPKD NGKSPLEVKR FQLHSLIREA ACVAKCLSVY KGYGFEMDVQ TRLPSLVVGD EKRTFQLVMY MLGYILDMSE
501: GGKTVTFRVV SEGTGSGQDK NKRESGMWKS HLSDDSLGVK FEVEINEIKS PPLDGSVIAM RHVTNRRYHS NGIKEGLSLG MCRKLAQMMQ GNIWISPKSH
601: GQTQSMQLVL RFQTRPSIRR SILAGNAPEL QHPNSNSILR GLRITLADDD DVNRTVTKRL LEKLGCEVTA VSSGFECLSA LSNVEMSYRV VILDLQMPEM
701: DGFEVAMKIR KFCGHHWPLI IALTASTEDH VRERCLQMGM NGMIQKPVLL HVMASELRRA LQSASE
Best Arabidopsis Sequence Match ( AT3G04580.2 )
(BLAST)
001: MLRSLGLGLL LFALLALVSG DNDYVSCNCD DEGFLSVHTI LECQRVSDLL IAIAYFSIPL ELLYFISFSN VPFKWVLVQF IAFIVLCGMT HLLNAWTYYG
101: PHSFQLMLWL TIFKFLTALV SCATAITLLT LIPLLLKWKV RELYLKQNVL ELNEEVGLMK RQKEMSVQVR MLTREIRKSL DKHMILRTTL VELSKILDLQ
201: NSAVWMPNEN RTEMHLTHEL RANPMRSFRV IPINDPDVVQ VRETKVVTIL RKNSVLAVES SGCGGSEEFG PVAAIRMPML HGLNFKGGTP EFVDTPYAIM
301: VLVLPSANSR VWTDKEIEIA EVVADQVAVA ISHASVLEES QLMREKLGIQ NRALLRAKQN AMMASQARNT CQKVMSHGMR RPMHTILGLL SMFQSESMSL
401: DQKIIVDALM KTSTVLSALI NDVIDISPKD NGKSALEVKR FQLHSLIREA ACVAKCLSVY KGYGFEMDVQ TRLPNLVVGD EKRTFQLVMY MLGYILDMTD
501: GGKTVTFRVI CEGTGTSQDK SKRETGMWKS HMSDDSLGVK FEVEINEIQN PPLDGSAMAM RHIPNRRYHS NGIKEGLSLG MCRKLAQMMQ GNIWISPKSH
601: GQTQSMQLVL RFQTRPSIRR SILAGNAPEL QHPNSNSILR GLRITLADDD DVNRTVTKRL LEKLGCEVTA VSSGFECLNA LSNVEMSYRV VILDLQMPEM
701: DGFEVAMKIR KFCGHHWPLI IALTASTEDH VRERCLQMGM NGMIQKPVLL HVMASELRRA LQTASE
Arabidopsis Description
EIN4EIN4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.