Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035381.1-P | Field mustard | cytosol, golgi, plasma membrane | 96.52 | 96.52 |
| CDX74635 | Canola | cytosol, golgi, plasma membrane | 96.52 | 96.52 |
| AT5G35750.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 83.29 | 81.38 |
| CDY50037 | Canola | endoplasmic reticulum, golgi, plasma membrane | 67.97 | 71.06 |
| CDX93074 | Canola | plasma membrane | 67.28 | 70.46 |
| GSMUA_Achr4P17470_001 | Banana | cytosol | 42.65 | 63.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.26 | 59.45 |
| VIT_12s0057g00690.t01 | Wine grape | endoplasmic reticulum, golgi | 64.23 | 58.02 |
| PGSC0003DMT400015729 | Potato | cytosol | 18.45 | 57.61 |
| Zm00001d014297_P006 | Maize | cytosol | 46.82 | 57.17 |
| CDY03102 | Canola | cytosol | 3.57 | 56.94 |
| KRH14106 | Soybean | mitochondrion | 59.53 | 55.84 |
| Solyc07g047770.2.1 | Tomato | golgi | 59.97 | 55.79 |
| CDY03106 | Canola | cytosol | 3.48 | 55.56 |
| KRH74010 | Soybean | mitochondrion, plasma membrane | 58.57 | 55.12 |
| CDY03909 | Canola | endoplasmic reticulum, golgi, plasma membrane | 45.69 | 52.45 |
| CDY15717 | Canola | endoplasmic reticulum, golgi, plasma membrane | 46.56 | 52.4 |
| GSMUA_Achr1P22740_001 | Banana | cytosol | 36.64 | 51.72 |
| CDY17631 | Canola | cytosol, peroxisome, plasma membrane | 45.43 | 49.62 |
| CDY03101 | Canola | cytosol, peroxisome, plasma membrane | 45.34 | 49.52 |
| Os10t0362300-03 | Rice | extracellular | 51.0 | 49.37 |
| CDY64702 | Canola | mitochondrion | 3.13 | 27.48 |
| CDY21123 | Canola | cytosol | 6.35 | 24.33 |
| CDY49629 | Canola | cytosol | 2.7 | 22.3 |
| CDY07498 | Canola | cytosol | 13.75 | 21.47 |
| CDY49633 | Canola | cytosol | 13.66 | 21.36 |
| CDY66567 | Canola | cytosol | 2.7 | 21.23 |
| CDX97049 | Canola | nucleus | 16.19 | 20.76 |
| CDX80113 | Canola | plasma membrane | 11.05 | 20.72 |
| CDX69808 | Canola | nucleus | 16.1 | 20.6 |
| CDY40112 | Canola | nucleus | 16.19 | 20.31 |
| CDX78398 | Canola | cytosol | 11.05 | 20.22 |
| CDY67688 | Canola | nucleus | 16.01 | 20.2 |
| CDY63851 | Canola | plasma membrane | 10.88 | 20.06 |
| CDY30004 | Canola | plasma membrane | 12.97 | 19.45 |
| CDY35503 | Canola | plasma membrane | 12.97 | 19.13 |
| CDY70443 | Canola | plasma membrane | 12.97 | 19.1 |
| CDY20843 | Canola | nucleus | 18.62 | 17.94 |
| CDY24380 | Canola | nucleus | 18.54 | 17.84 |
| CDY67999 | Canola | plasma membrane | 8.96 | 16.64 |
| CDX90318 | Canola | cytosol | 4.44 | 16.56 |
| CDY12735 | Canola | endoplasmic reticulum, golgi, plasma membrane | 15.32 | 16.53 |
| CDY01193 | Canola | endoplasmic reticulum, golgi, plasma membrane | 15.32 | 16.48 |
| CDX80103 | Canola | endoplasmic reticulum, golgi, plasma membrane | 15.84 | 16.35 |
| CDY70681 | Canola | endoplasmic reticulum | 8.7 | 16.21 |
| CDX86641 | Canola | endoplasmic reticulum | 8.27 | 15.97 |
| CDY55381 | Canola | endoplasmic reticulum, plasma membrane, plastid | 15.58 | 15.67 |
| CDX70367 | Canola | endoplasmic reticulum, golgi | 16.54 | 13.85 |
| CDX78397 | Canola | cytosol | 4.0 | 11.95 |
| CDY15498 | Canola | plasma membrane | 11.14 | 7.49 |
Protein Annotations
| Gene3D:1.10.287.130 | MapMan:11.4.2.1 | Gene3D:3.30.450.350 | Gene3D:3.40.50.2300 | GO:A0A078IAW8 | UniProt:A0A078IAW8 |
| ProteinID:AIM18487.1 | EnsemblPlants:CDY47297 | ProteinID:CDY47297 | ProteinID:CDY47297.1 | InterPro:CHASE_dom | InterPro:CheY-like_superfamily |
| GO:GO:0000155 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0016772 | GO:GO:0019538 | GO:GO:0023014 | GO:GO:0038023 | EnsemblPlantsGene:GSBRNA2T00087122001 |
| InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:HisK_dim/P | InterPro:HisK_dim/P_sf | InterPro:His_kinase_dom | InterPro:IPR001789 |
| InterPro:IPR005467 | InterPro:IPR006189 | InterPro:IPR036890 | PFAM:PF00072 | PFAM:PF00512 | PFAM:PF02518 |
| PFAM:PF03924 | PRINTS:PR00344 | PFscan:PS50109 | PFscan:PS50110 | PFscan:PS50839 | PANTHER:PTHR43719 |
| PANTHER:PTHR43719:SF16 | SMART:SM00387 | SMART:SM00388 | SMART:SM00448 | SMART:SM01079 | SUPFAM:SSF47384 |
| SUPFAM:SSF52172 | SUPFAM:SSF55874 | InterPro:Sig_transdc_His_kin-like_C | InterPro:Sig_transdc_resp-reg_receiver | TMHMM:TMhelix | UniParc:UPI0004EF1D70 |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g29780DBnaC04g29780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAW8]
Coordinates
chrLK032706:-:141715..146695
Molecular Weight (calculated)
127882.0 Da
IEP (calculated)
6.428
GRAVY (calculated)
-0.162
Length
1149 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSITCELTSK KAEESSGGVK WIKKHLFFMI LCCLTTSLVI VILMSSGKEE ETGSCNGEGR VLYIHQNVTR SEIHDLVSLF SDSDQVTSFE CQKESIPGMW
0101: ANYGITCSLN MRLEKEETQS VHDNSKSLIP WNLINPSGLQ QSLLQPENHR EGLDWELSSY LRNTWWCLIL SVLVCHKFFV SHSKPPNEIE GKTNLQDSLA
0201: QKQQRACRGA GKGRKNILLL GVIAGVSMSV WWFWDSNQKI ILQRRETLEN MCDERARVLQ DQFNVSLNHV HALSILVSTF HHGKTPSAID QKTFGEYTER
0301: TNFERPLTSG VAYALKVPHS KREQFEKDHG WTIKKMETED QTLVQDCVPE NFDPAPIQDE YAPVIFAQET VSHIVSVDMM SGQEDRENIL RARASGKGVL
0401: TSPFKLLKSN HLGVVLTFAV YDTDLPPDAT EEQRVEATIG YLGASYDMPS LVEKLLHQLA SKQTIVVDVY DTSNASGLIK MYGTEIGDTS EEYISRLDFG
0501: DPSRKHEMRC RFKDKLPIPW TAITPSGLVL IITFLVAYIF HDAISRIAIV EEDCQKMMKL KARAEAADIA KSQFLATVSH EIRTPMNGVL GMLKMLMDTD
0601: LDAKQMDYAQ TAHGSGKDLI SLINEVLDQA KIESGRLELE NVPFDMRLVL DNVSSLLSGK ANEKGIELAV YVSSQVPDVV VGDPSRFRQI ITNLVGNSIK
0701: FTREKGHIFI SVHLAEEVRE SVNIKDAVLR QRLAVGSSES GETVSGFPAV NAWGSWESFK TIYSTENHNS DRIIKLLVTV EDTGVGIPLD AQGRIFTPFM
0801: QADSSTSRTY GGTGIGLSIS KRLVELMQGE MGFVSRPGIG STFSFTGVFG KAETTSSFNT KFDLAIQEFK GLRALVIDSR NIRAEVTRYH LQRLGICADI
0901: VSSLRTACTC VSKLGGLALV LIDKDAWNKN GFELLDGLLN CIKEAASTRP TKILLLATSA TLLERSEMKS SGLVDEVVIK PLRMSALICS LQETLVNGKK
1001: RQPSRKRTDL GHLLREKRIL VVDDNLVNRR VAEGALKKYG AIVTCVESGK AALAMLKLPH NFDACFMDLQ MPEMDGFEAT RRVRDLEKKK IVSGEMYSSW
1101: HVPILAMTAD VIQATNEECV KCGMDGYVSK PFEEEALYAA VAKFFESAG
0101: ANYGITCSLN MRLEKEETQS VHDNSKSLIP WNLINPSGLQ QSLLQPENHR EGLDWELSSY LRNTWWCLIL SVLVCHKFFV SHSKPPNEIE GKTNLQDSLA
0201: QKQQRACRGA GKGRKNILLL GVIAGVSMSV WWFWDSNQKI ILQRRETLEN MCDERARVLQ DQFNVSLNHV HALSILVSTF HHGKTPSAID QKTFGEYTER
0301: TNFERPLTSG VAYALKVPHS KREQFEKDHG WTIKKMETED QTLVQDCVPE NFDPAPIQDE YAPVIFAQET VSHIVSVDMM SGQEDRENIL RARASGKGVL
0401: TSPFKLLKSN HLGVVLTFAV YDTDLPPDAT EEQRVEATIG YLGASYDMPS LVEKLLHQLA SKQTIVVDVY DTSNASGLIK MYGTEIGDTS EEYISRLDFG
0501: DPSRKHEMRC RFKDKLPIPW TAITPSGLVL IITFLVAYIF HDAISRIAIV EEDCQKMMKL KARAEAADIA KSQFLATVSH EIRTPMNGVL GMLKMLMDTD
0601: LDAKQMDYAQ TAHGSGKDLI SLINEVLDQA KIESGRLELE NVPFDMRLVL DNVSSLLSGK ANEKGIELAV YVSSQVPDVV VGDPSRFRQI ITNLVGNSIK
0701: FTREKGHIFI SVHLAEEVRE SVNIKDAVLR QRLAVGSSES GETVSGFPAV NAWGSWESFK TIYSTENHNS DRIIKLLVTV EDTGVGIPLD AQGRIFTPFM
0801: QADSSTSRTY GGTGIGLSIS KRLVELMQGE MGFVSRPGIG STFSFTGVFG KAETTSSFNT KFDLAIQEFK GLRALVIDSR NIRAEVTRYH LQRLGICADI
0901: VSSLRTACTC VSKLGGLALV LIDKDAWNKN GFELLDGLLN CIKEAASTRP TKILLLATSA TLLERSEMKS SGLVDEVVIK PLRMSALICS LQETLVNGKK
1001: RQPSRKRTDL GHLLREKRIL VVDDNLVNRR VAEGALKKYG AIVTCVESGK AALAMLKLPH NFDACFMDLQ MPEMDGFEAT RRVRDLEKKK IVSGEMYSSW
1101: HVPILAMTAD VIQATNEECV KCGMDGYVSK PFEEEALYAA VAKFFESAG
0001: MSITCELLNL TSKKAKKSSS SDKKWLKKPL FFLILCGSLV IVLVMFLRLG RSQKEETDSC NGEEKVLYRH QNVTRSEIHD LVSLFSDSDQ VTSFECHKES
0101: SPGMWTNYGI TCSLSVRSDK QETRGLPWNL GLGHSISSTS CMCGNLEPIL QQPENLEEEN HEEGLEQGLS SYLRNAWWCL ILGVLVCHKI YVSHSKARGE
0201: RKEKVHLQEA LAPKKQQQRA QTSSRGAGRW RKNILLLGIL GGVSFSVWWF WDTNEEIIMK RRETLANMCD ERARVLQDQF NVSLNHVHAL SILVSTFHHG
0301: KIPSAIDQRT FEEYTERTNF ERPLTSGVAY ALKVPHSERE KFEKEHGWAI KKMETEDQTV VQDCVPENFD PAPIQDEYAP VIFAQETVSH IVSVDMMSGE
0401: EDRENILRAR ASGKGVLTSP FKLLKSNHLG VVLTFAVYDT SLPPDATEEQ RVEATIGYLG ASYDMPSLVE KLLHQLASKQ TIAVDVYDTT NTSGLIKMYG
0501: SEIGDISEQH ISSLDFGDPS RNHEMHCRFK HKLPIPWTAI TPSILVLVIT FLVGYILYEA INRIATVEED CQKMRELKAR AEAADIAKSQ FLATVSHEIR
0601: TPMNGVLGML KMLMDTDLDA KQMDYAQTAH GSGKDLTSLI NEVLDQAKIE SGRLELENVP FDMRFILDNV SSLLSGKANE KGIELAVYVS SQVPDVVVGD
0701: PSRFRQIITN LVGNSIKFTQ ERGHIFISVH LADEVKEPLT IEDAVLKQRL ALGCSESGET VSGFPAVNAW GSWKNFKTCY STESQNSDQI KLLVTVEDTG
0801: VGIPVDAQGR IFTPFMQADS STSRTYGGTG IGLSISKRLV ELMQGEMGFV SEPGIGSTFS FTGVFGKAET NTSITKLERF DLAIQEFTGL RALVIDNRNI
0901: RAEVTRYELR RLGISADIVS SLRMACTCCI SKLENLAMIL IDKDAWNKEE FSVLDELFTR SKVTFTRVPK IFLLATSATL TERSEMKSTG LIDEVVIKPL
1001: RMSVLICCLQ ETLVNGKKRQ PNRQRRNLGH LLREKQILVV DDNLVNRRVA EGALKKYGAI VTCVESGKAA LAMLKPPHNF DACFMDLQMP EMDGFEATRR
1101: VRELEREINK KIASGEVSAE MFCKFSSWHV PILAMTADVI QATHEECMKC GMDGYVSKPF EEEVLYTAVA RFFEPC
0101: SPGMWTNYGI TCSLSVRSDK QETRGLPWNL GLGHSISSTS CMCGNLEPIL QQPENLEEEN HEEGLEQGLS SYLRNAWWCL ILGVLVCHKI YVSHSKARGE
0201: RKEKVHLQEA LAPKKQQQRA QTSSRGAGRW RKNILLLGIL GGVSFSVWWF WDTNEEIIMK RRETLANMCD ERARVLQDQF NVSLNHVHAL SILVSTFHHG
0301: KIPSAIDQRT FEEYTERTNF ERPLTSGVAY ALKVPHSERE KFEKEHGWAI KKMETEDQTV VQDCVPENFD PAPIQDEYAP VIFAQETVSH IVSVDMMSGE
0401: EDRENILRAR ASGKGVLTSP FKLLKSNHLG VVLTFAVYDT SLPPDATEEQ RVEATIGYLG ASYDMPSLVE KLLHQLASKQ TIAVDVYDTT NTSGLIKMYG
0501: SEIGDISEQH ISSLDFGDPS RNHEMHCRFK HKLPIPWTAI TPSILVLVIT FLVGYILYEA INRIATVEED CQKMRELKAR AEAADIAKSQ FLATVSHEIR
0601: TPMNGVLGML KMLMDTDLDA KQMDYAQTAH GSGKDLTSLI NEVLDQAKIE SGRLELENVP FDMRFILDNV SSLLSGKANE KGIELAVYVS SQVPDVVVGD
0701: PSRFRQIITN LVGNSIKFTQ ERGHIFISVH LADEVKEPLT IEDAVLKQRL ALGCSESGET VSGFPAVNAW GSWKNFKTCY STESQNSDQI KLLVTVEDTG
0801: VGIPVDAQGR IFTPFMQADS STSRTYGGTG IGLSISKRLV ELMQGEMGFV SEPGIGSTFS FTGVFGKAET NTSITKLERF DLAIQEFTGL RALVIDNRNI
0901: RAEVTRYELR RLGISADIVS SLRMACTCCI SKLENLAMIL IDKDAWNKEE FSVLDELFTR SKVTFTRVPK IFLLATSATL TERSEMKSTG LIDEVVIKPL
1001: RMSVLICCLQ ETLVNGKKRQ PNRQRRNLGH LLREKQILVV DDNLVNRRVA EGALKKYGAI VTCVESGKAA LAMLKPPHNF DACFMDLQMP EMDGFEATRR
1101: VRELEREINK KIASGEVSAE MFCKFSSWHV PILAMTADVI QATHEECMKC GMDGYVSKPF EEEVLYTAVA RFFEPC
Arabidopsis Description
AHK2Histidine kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U2]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.