CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX74635
CDY47297

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15300.1	CDX74635	AT5G35750.1	18642946
AT2G15300.1	CDY47297	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039836.1-P	Field mustard	plasma membrane	98.33	98.47
CDY52422	Canola	plasma membrane	94.57	94.31
AT2G15300.1	Thale cress	plasma membrane	75.77	73.12
CDX69035	Canola	plasma membrane	66.71	64.12
CDX75411	Canola	plasma membrane	65.88	63.4
CDY69287	Canola	mitochondrion	29.11	60.06
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	5.57	57.14
Zm00001d045902_P001	Maize	cytosol	8.08	51.79
PGSC0003DMT400066550	Potato	endoplasmic reticulum, plasma membrane	20.61	48.84
VIT_03s0180g00150.t01	Wine grape	plasma membrane	50.42	47.88
KRH33257	Soybean	cytosol, golgi, plasma membrane	20.33	47.87
KRG91028	Soybean	plasma membrane	50.97	47.23
GSMUA_Achr4P12930_001	Banana	plasma membrane, vacuole	37.6	46.88
KRH35733	Soybean	plasma membrane	50.56	46.54
GSMUA_Achr8P25210_001	Banana	plasma membrane	43.73	45.91
Solyc01g107650.2.1	Tomato	plasma membrane	48.05	44.75
GSMUA_Achr9P22590_001	Banana	plasma membrane	39.69	43.18
GSMUA_Achr3P28250_001	Banana	mitochondrion	34.26	42.34
CDX69286	Canola	plasma membrane	43.87	41.78
CDX75634	Canola	plasma membrane	43.87	41.5
GSMUA_Achr4P09420_001	Banana	plasma membrane	39.0	41.0
CDX89556	Canola	plasma membrane	43.18	40.52
CDY38934	Canola	plasma membrane	43.04	40.34
CDX71991	Canola	vacuole	13.51	39.11
Os09t0110100-01	Rice	plasma membrane	40.25	36.4
EER90087	Sorghum	plasma membrane	43.59	36.1
Zm00001d005298_P001	Maize	mitochondrion, plasma membrane	41.5	35.95
Zm00001d019701_P001	Maize	plasma membrane	41.09	35.71
TraesCS5D01G165400.1	Wheat	plasma membrane	40.39	35.71
TraesCS5B01G158000.1	Wheat	plasma membrane	40.39	35.71
TraesCS5A01G160500.1	Wheat	plasma membrane	40.39	35.63
EER98554	Sorghum	plasma membrane	41.78	35.55
Zm00001d046626_P001	Maize	plasma membrane	41.5	35.35
CDX77808	Canola	plasma membrane	34.26	34.89
Os06t0638500-00	Rice	plasma membrane	42.34	34.7
CDY42116	Canola	plasma membrane	33.15	34.2
CDX84980	Canola	plasma membrane	33.29	34.19
TraesCS7D01G512900.1	Wheat	plasma membrane	40.95	33.79
CDY01814	Canola	plasma membrane	33.84	33.75
CDX96089	Canola	plasma membrane	33.57	33.66
TraesCS7A01G523900.1	Wheat	plasma membrane	40.53	33.41
TraesCS7B01G441200.1	Wheat	plasma membrane	40.81	33.37
HORVU7Hr1G116470.2	Barley	plasma membrane	40.53	33.26
CDY47962	Canola	plasma membrane	29.67	33.02
CDY06072	Canola	plasma membrane	29.39	32.66
CDX71990	Canola	cytosol	14.9	32.62
CDY52887	Canola	plasma membrane	31.2	32.61
CDY14823	Canola	plasma membrane	28.97	32.5
CDY17688	Canola	plasma membrane	34.54	31.88
CDX96123	Canola	plasma membrane	15.88	29.01
CDY01423	Canola	plasma membrane	42.48	28.69
CDY12827	Canola	plasma membrane	42.2	28.5
CDX96124	Canola	cytosol	4.6	26.4

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078ITI7	UniProt:A0A078ITI7
EnsemblPlants:CDY54466	ProteinID:CDY54466	ProteinID:CDY54466.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00014131001	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069
PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27008
PANTHER:PTHR27008:SF42	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EE3E57	SEG:seg	:	:	:	:

Description

BnaA09g52710DBnaA09g52710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITI7]

Coordinates

chrLK033322:-:5501..8323

Molecular Weight (calculated)

78773.2 Da

IEP (calculated)

7.415

GRAVY (calculated)

-0.167

Length

718 amino acids

Sequence
(BLAST)

001: MTSHRRNLSN HFIFHLLLLL LPTLLQALNT DGVLLLSFKY TITSDPLSVL RNWNYDDETP CSWTGVTCTE LGSPNTPDMS RVTTLALPNK QLLGSVSPSL
101: FSIPNLTILD LSNNFFHGSL PDTLSNATQL RVLSLGNNNV SGQVPESITN VATLQLLNLS ANAFTGKIPQ DLSLLNNLTV LDISSNHLDG SLPQDLQGTS
201: LHYLNLSHNQ ISGDISPTFA QKVPPTIILD ISFNNLTGPI PSTPPMLNQR AESFLGNLGL CGQPLKTPCS IPSTLSDPQN ISDTTSPAIA VMPRSSSPPT
301: NPSPDSPPNQ SKLKPTTIVG ITVADIAGLA IIAMIILYVY QLRKRRSYQE YSTFKVLKDC LEKNDTLSLK KEPKQSVFAL EVTKSPAAKP RWSSCVTGRY
401: DETSSESSDV ENQKTVDALK RSGETQLVTV DGETKLELET LLKASAYVLG TSRGGIVYKA VLENGAAFAV RRIGAESCTA VKLKEFEREV QGIAKLRHPN
501: LVRVRGFVWG REEKLLISDY VPNGSLHCSS IYSKSGSSST SSPNPLSFKA RVKIARGIAR GIAYIHDKKH VHGNIKPNNI LFDSEFEPII TDTGLDRLMT
601: PAHSLIAGPA SGSHHHPPEW STSEKPNPRW DVYSFGVIFL ELLMGRVFLV DRDFVRESEV DEKTWFLRLV DGTINSDLAY HEDEVVACFR LTYGCVSSLP
701: QKRPSMKEVV QVLEKISV

Best Arabidopsis Sequence Match ( AT2G15300.1 )
(BLAST)

001: MTSNRSNLFL HLLLLHLPTL IQALNTDGVA LLSFKYSILN DPLLVLRNWN YDDETPCSWT GVTCTELGIP NTPDMFRVTS LVLPNKQLLG SVSPDLFSIL
101: HLRILDLSDN FFHGSLPDSV SNASELRILS LGNNKVSGEL PRSISNVASL QLLNLSANAL TGKIPPNLSL PKNLTVISLA KNSFSGDIPS GFEAVQVLDI
201: SSNLLDGSLP PDFRGTSLLY LNLSNNQISG MISPPFAEKF PASAIIDLSF NNLTGPIPNT PPLLNQKTES FSGNIGLCGQ PLKTLCSIPS TLSDPPNISE
301: TTSPAIAVMP TTPTPTNSST ESTNQTAKSK LKPSTIIGIT LADIAGLAII AMFILYIYQL KKRRSYQEYS TFNVLQKCLE KNDTLSVKKS KHNVADALEF
401: TKSPPAKMGC GSWISRRYEE TTSVSSESDI ENQKPVEAFD RTGGGRVKHN TETQLVTVDG ETQLELDTLL KASAYVLGTN RSDGIVYKAV LENGAAFAVR
501: RIGAESCPAA KFKEFEKEVQ GIAKLRHPNL VRVRGFVWGK EEKLLISDYV PNGNLPLSSI SAKSSSFSHK PLSFEARLKL ARGIARGIAY IHDKKHVHGN
601: IKANNILLDS EFEPVITDMG LDRIMTSAHL LTDGPLSSLQ DQPPEWSTSQ KPNPKWDVYS FGVILLELLT GIVFSVDRDL VRDSETDEKS WFLKLVDGEI
701: RVEVAHREDE AVACLKLGYE CVSSLPQKRP SMKEVVQVLE KMFV

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SHU6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.