CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96124	Canola	cytosol	18.05	99.2
Bra004191.1-P	Field mustard	cytosol, nucleus, plasma membrane	94.91	97.46
CDX96123	Canola	plasma membrane	54.73	95.67
AT1G66830.1	Thale cress	plasma membrane	82.24	82.48
GSMUA_Achr3P21080_001	Banana	plasma membrane	39.74	50.37
GSMUA_Achr9P21500_001	Banana	plasma membrane	44.1	49.11
GSMUA_Achr8P18330_001	Banana	plasma membrane	37.99	48.69
GSMUA_Achr3P29400_001	Banana	plasma membrane	40.9	47.39
GSMUA_Achr4P06720_001	Banana	plasma membrane	41.34	47.1
CDX77808	Canola	plasma membrane	47.89	46.67
Os01t0514700-01	Rice	plasma membrane	46.14	44.96
TraesCS1A01G240300.1	Wheat	plasma membrane	45.56	44.78
EES03041	Sorghum	plasma membrane	45.85	44.24
CDX84980	Canola	plasma membrane	44.98	44.21
CDY42116	Canola	plasma membrane	44.54	43.97
HORVU1Hr1G056920.1	Barley	plasma membrane	45.56	43.96
CDY17688	Canola	plasma membrane	49.05	43.32
TraesCS1B01G252400.1	Wheat	plasma membrane	46.14	43.31
TraesCS1D01G240400.1	Wheat	plasma membrane, plastid	45.85	42.57
CDX71991	Canola	vacuole	13.97	38.71
CDX71990	Canola	cytosol	17.47	36.59
CDY01814	Canola	plasma membrane	38.28	36.53
CDX96089	Canola	plasma membrane	37.41	35.89
CDY06072	Canola	plasma membrane	32.31	34.37
CDY47962	Canola	plasma membrane	32.17	34.26
CDY14823	Canola	plasma membrane	31.59	33.91
CDX75411	Canola	plasma membrane	36.54	33.65
CDX69035	Canola	plasma membrane	36.54	33.6
CDY52422	Canola	plasma membrane	32.75	31.25
CDY54466	Canola	plasma membrane	32.61	31.2
CDX69286	Canola	plasma membrane	33.48	30.5
CDX89556	Canola	plasma membrane	33.92	30.46
CDY38934	Canola	plasma membrane	33.92	30.42
CDX75634	Canola	plasma membrane	33.48	30.3
CDY69287	Canola	mitochondrion	14.85	29.31
CDY12827	Canola	plasma membrane	31.15	20.13
CDY01423	Canola	plasma membrane	31.0	20.04

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078ISC8	UniProt:A0A078ISC8
EnsemblPlants:CDY52887	ProteinID:CDY52887	ProteinID:CDY52887.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00008049001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714	PFAM:PF08263	PFAM:PF13855	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR27008	PANTHER:PTHR27008:SF11	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EE0584	SEG:seg

Description

BnaC06g27800DBnaC06g27800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISC8]

Coordinates

chrLK033139:-:19869..22585

Molecular Weight (calculated)

76127.4 Da

IEP (calculated)

8.971

GRAVY (calculated)

-0.091

Length

687 amino acids

Sequence
(BLAST)

001: MAQLFLILCF LLTLFISMAT SLNDQGLALL SFKQALLNQK DYSVLTTWNS SDSNPCFWLG ITCNKDLRVI SIRLPNKNLS GSLHPSIGTL LSLRHINLKN
101: NEFQGKLPTE LFAPEGLQSL VLSGNSFSGF VPEEIGRLKS LITLDLSKNS FNGSIPLSLL QCKKLKTLVL SNNNFSGDLP TRFGSSLVQL RTLNLSFNRL
201: SGTIPEDISN LKNLKGTLDL SHNSLSGMIP TSLGDLPEVL YVDLSYNNLS GPIPQSNVLL NAGPNAFQGN PLLCGIPTKV SCATRNTQTI PSQLYTQKAN
301: HHSRFCTILT ATGCTVAGII FLVSLFIYHL RKASAASADK DHQNNRTSHS EKKTMQEFLC FKGNSASEAL DENKTQQVFM PMDPEIQFDL DQLLKASAFL
401: LGKSRIGLVY KVVLENGLML AVRRLGDKGW LRLKEFLADV EAMAKIKHPN VLNLQACCWS QEEKLLIYDY IPNGDLGSVI QGKPGSLSCK QLSWPVRLRI
501: LRGIAKGLTY IHEFSAKRYV HGNINSSNIL LGPNLEPKIS GFGLGRIVDM PSSDIRSDQI SPMESRSPSV SREAYYQAPE ASKMTKPSQK WDVYSFGLVV
601: LEMVTGKFPV MQMSNSETDL VMWVEAAAER NKPVWYVLDP VLARDRDMED SMVQVVKIGL DCVKKSPDKR PSMRNVFESF EKLASSI

Best Arabidopsis Sequence Match ( AT1G66830.1 )
(BLAST)

001: MSQLFLILCF ILTHFFAIAT SLNDQGLALL SFKQSIQNQS DSVFTNWNSS DSNPCSWQGV TCNYDMRVVS IRLPNKRLSG SLDPSIGSLL SLRHINLRDN
101: DFQGKLPVEL FGLKGLQSLV LSGNSFSGFV PEEIGSLKSL MTLDLSENSF NGSISLSLIP CKKLKTLVLS KNSFSGDLPT GLGSNLVHLR TLNLSFNRLT
201: GTIPEDVGSL ENLKGTLDLS HNFFSGMIPT SLGNLPELLY VDLSYNNLSG PIPKFNVLLN AGPNAFQGNP FLCGLPIKIS CSTRNTQVVP SQLYTRRANH
301: HSRLCIILTA TGGTVAGIIF LASLFIYYLR KASARANKDQ NNRTCHINEK LKKTTKPEFL CFKTGNSESE TLDENKNQQV FMPMDPEIEF DLDQLLKASA
401: FLLGKSRIGL VYKVVLENGL MLAVRRLEDK GWLRLKEFLA DVEAMAKIKH PNVLNLKACC WSPEEKLLIY DYIPNGDLGS AIQGRPGSVS CKQLTWTVRL
501: KILRGIAKGL TYIHEFSPKR YVHGHINTSN ILLGPNLEPK VSGFGLGRIV DTSSDIRSDQ ISPMETSSPI LSRESYYQAP EAASKMTKPS QKWDVYSFGL
601: VILEMVTGKS PVSSEMDLVM WVESASERNK PAWYVLDPVL ARDRDLEDSM VQVIKIGLAC VQKNPDKRPH MRSVLESFEK LVTSI

Arabidopsis Description

Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9N5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.