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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012148.1-P Field mustard plasma membrane 68.2 98.11
CDY12827 Canola plasma membrane 95.2 95.2
AT5G67280.1 Thale cress plasma membrane 61.05 86.42
CDX89556 Canola plasma membrane 40.64 56.47
KRH04528 Soybean plasma membrane 40.36 56.37
CDY38934 Canola plasma membrane 40.45 56.14
VIT_07s0129g01070.t01 Wine grape plasma membrane 41.11 55.95
CDX75634 Canola plasma membrane 39.23 54.94
KRH57974 Soybean plasma membrane 39.7 54.81
CDX69286 Canola plasma membrane 38.85 54.77
PGSC0003DMT400064235 Potato plasma membrane 38.38 53.12
Solyc02g092940.2.1 Tomato plasma membrane 38.29 52.99
GSMUA_Achr4P12930_001 Banana plasma membrane, vacuole 28.69 52.95
Zm00001d008868_P001 Maize endoplasmic reticulum, extracellular, plastid 3.48 52.86
Zm00001d045902_P001 Maize cytosol 5.46 51.79
GSMUA_Achr8P25210_001 Banana plasma membrane 32.17 50.0
GSMUA_Achr9P22590_001 Banana plasma membrane 30.29 48.79
GSMUA_Achr3P28250_001 Banana mitochondrion 26.43 48.36
GSMUA_Achr4P09420_001 Banana plasma membrane 29.92 46.56
CDX69035 Canola plasma membrane 30.86 43.91
CDX75411 Canola plasma membrane 30.76 43.83
CDY52422 Canola plasma membrane 28.79 42.5
CDY54466 Canola plasma membrane 28.69 42.48
Os09t0110100-01 Rice plasma membrane 30.01 40.18
TraesCS5B01G158000.1 Wheat plasma membrane 30.01 39.29
TraesCS5D01G165400.1 Wheat plasma membrane 29.82 39.04
EER90087 Sorghum plasma membrane 31.8 38.98
EER98554 Sorghum plasma membrane 30.95 38.98
TraesCS5A01G160500.1 Wheat plasma membrane 29.82 38.94
Zm00001d019701_P001 Maize plasma membrane 30.1 38.74
Zm00001d005298_P001 Maize mitochondrion, plasma membrane 30.01 38.48
Os06t0638500-00 Rice plasma membrane 31.42 38.13
CDX71991 Canola vacuole 8.84 37.9
TraesCS7D01G512900.1 Wheat plasma membrane 30.95 37.82
HORVU7Hr1G116470.2 Barley plasma membrane 30.95 37.6
TraesCS7A01G523900.1 Wheat plasma membrane 30.76 37.54
CDY42116 Canola plasma membrane 24.46 37.36
TraesCS7B01G441200.1 Wheat plasma membrane 30.67 37.13
CDX84980 Canola plasma membrane 24.36 37.05
Zm00001d046626_P001 Maize plasma membrane 29.35 37.01
CDY69287 Canola mitochondrion 11.95 36.49
CDX77808 Canola plasma membrane 22.86 34.47
CDY01814 Canola plasma membrane 23.14 34.17
CDX96089 Canola plasma membrane 22.77 33.8
CDY06072 Canola plasma membrane 19.85 32.66
CDY14823 Canola plasma membrane 19.66 32.66
CDX71990 Canola cytosol 10.07 32.62
CDY47962 Canola plasma membrane 19.76 32.56
CDY17688 Canola plasma membrane 23.33 31.88
CDY52887 Canola plasma membrane 20.04 31.0
CDX96123 Canola plasma membrane 10.91 29.52
CDX96124 Canola cytosol 3.01 25.6
Protein Annotations
Gene3D:1.10.418.10Gene3D:1.10.510.10Gene3D:1.20.5.1160MapMan:13.4.3.1MapMan:18.4.1.3MapMan:20.1.5.1.1
Gene3D:3.80.10.10GO:A0A078EPI1EnsemblPlants:CDY01423ProteinID:CDY01423ProteinID:CDY01423.1InterPro:CH-domain
InterPro:CH_dom_sfInterPro:EB1_CInterPro:EB1_C_sfGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008017GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00112420001InterPro:IPR000719InterPro:IPR001611InterPro:IPR001715InterPro:IPR004953
InterPro:IPR032675InterPro:IPR036872InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
PFAM:PF00069PFAM:PF00307PFAM:PF03271PFAM:PF08263PFAM:PF13855PFscan:PS50011
PFscan:PS50021PFscan:PS51230PANTHER:PTHR27008PANTHER:PTHR27008:SF35InterPro:Prot_kinase_domSUPFAM:SSF140612
SUPFAM:SSF47576SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE5EC8
SEG:seg:::::
Description
BnaA07g11960D
Coordinates
chrLK031926:+:977340..981980
Molecular Weight (calculated)
116036.0 Da
IEP (calculated)
7.877
GRAVY (calculated)
-0.316
Length
1063 amino acids
Sequence
(BLAST)
0001: MTTLAAVLLR YLFVFTVLLL CDQSLALNTD GVLLLSFRYS ILDDPLSVLR SWRLEDETPC SWRGVTCDES SRHVTVLSLP SSKLAGTLPS NLGSLPSLQK
0101: LDLSNNSING SFPASLLNAT ELRFLDLSRN HISGELPASF GASSKLNVLN LSENALVGEL PATLGWYRNL TVISLKNNYL SGEVPGGFKS TEYLDLSSNL
0201: IRGSLPLHFG GNRLRYFNAS FNRISGEIPS GFADEIPENA TVDLSFNQLT GQIPGFRVLA NQESDSFSGN PDLCGPDPAK HPCRDREATS PPPSLTPNSP
0301: PALAAIPNTL ELTNHPISSK SGSKSKSALK PVIIVGIVVG DIAGLAILGI VVFYIYQSRK RKTVTATSKW STSATDSNVL SKWYCLRKTV NVDGDCEEEE
0401: EESETSGSES DEENRVGRNR RSGLDDQDKK GTLVNLDSEK ELEIETLLKA SAYILGATGS GIMYKAVLQD STACGLDRFR DFETQVRALA KLVHPNLVRI
0501: RGFYWGSDEK LVIYDFVPNG SLANARYRKV GSSSCHLPWE ARLKIAKGVA RGLTYIHDKK HVHGNLKPSN ILLGLDMEPK VADFGLEKLL IGDMSYRTGG
0601: SAPIFGSKRS TSSHDFGPSP SPSPSSVGLP YNAPESLRSI KPNPKWDVYS FGVILLELLT GKIVVVDELG QVNGLVIDDG DRAVRMADAA IRAELEGKEE
0701: AVLACLKMGL ACASPIPQRR PNIKEALQRR KRVKTKMATK IGMMDSAYFV GRSEILAWIN STLQLNLSKV EEACSGAVHC QLMDSVHPGA VPMHKVNFDA
0801: KSEYEMIQNY KVLQDVFNKL KITKHIEVSK LVKGRPLDNL EFMQWLKKYC DSVNGGHLHN YHALERREAC KGGKEATKRA AATQQSAKSS SSSSSIAPRP
0901: SSSNGTRRHD PPSSNTGNHH SSKAPSSKQS KPVPAAYDEK ITELKLYIDS LEKERDFYFS KLRDVEILCQ NPDSENLPLV GSIKRILYAA DGEDVGAAAE
1001: TQNLSPIDEG SEERRSSGIE SQKRKLIANL DVDAAAITTL SPRQRLSDSS DVKCTGSSPL LTC
Best Arabidopsis Sequence Match ( AT5G67280.1 )
(BLAST)
001: MMTTVAADLH RYLFLITVFL FFLCDKTSLA LTTDGVLLLS FRYSIVDDPL YVFRSWRFDD ETPCSWRGVT CDASSRHVTV LSLPSSNLTG TLPSNLGSLN
101: SLQRLDLSNN SINGSFPVSL LNATELRFLD LSDNHISGAL PASFGALSNL QVLNLSDNSF VGELPNTLGW NRNLTEISLQ KNYLSGGIPG GFKSTEYLDL
201: SSNLIKGSLP SHFRGNRLRY FNASYNRISG EIPSGFADEI PEDATVDLSF NQLTGQIPGF RVLDNQESNS FSGNPGLCGS DHAKHPCRDG EATSPPPSPT
301: PNSPPALAAI PNTIGLTNHP ISSKTGPKSK WDHKPVLIIG IVVGDLAGLA ILGIVFFYIY QSRKRKTVTA TSKWSTSSTD SKVSKWYCLR KSVYVDGDCE
401: EEEEESETSE SESDEENPVG PNRRSGLDDQ EKKGTLVNLD SEKELEIETL LKASAYILGA TGSSIMYKAV LQDGTAVAVR RIAECGLDRF RDFEAQVRAV
501: AKLIHPNLVR IRGFYWGSDE KLVIYDFVPN GSLANARYRK VGSSPCHLPW DARLKIAKGI ARGLTYVHDK KYVHGNLKPS NILLGLDMEP KVADFGLEKL
601: LIGDMSYRTG GSAPIFGSKR STTSLEFGPS PSPSPSSVGL PYNAPESLRS IKPNSKWDVY SFGVILLELL TGKIVVVDEL GQVNGLVIDD GERAIRMADS
701: AIRAELEGKE EAVLACLKMG LACASPIPQR RPNIKEALQV LERFPVHSSQ Q
Arabidopsis Description
RLKAt5g67280/K3G17_4 [Source:UniProtKB/TrEMBL;Acc:Q9FGQ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.