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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016885.1-P Field mustard plastid 94.57 97.6
CDY14823 Canola plasma membrane 92.25 92.97
AT2G42290.1 Thale cress plasma membrane 81.86 81.73
CDX71990 Canola cytosol 36.59 71.95
CDX71991 Canola vacuole 27.44 71.37
CDY06072 Canola plasma membrane 70.54 70.43
VIT_08s0007g07820.t01 Wine grape plasma membrane 60.16 60.62
KRG95336 Soybean extracellular, plasma membrane, vacuole 57.98 57.45
KRH67019 Soybean vacuole 57.36 57.19
PGSC0003DMT400033662 Potato plasma membrane 55.19 56.78
Solyc03g064010.2.1 Tomato plasma membrane 54.73 56.21
KRH71886 Soybean plasma membrane 51.94 52.02
GSMUA_Achr3P11100_001 Banana plasma membrane 40.93 45.44
TraesCS7A01G245400.1 Wheat plasma membrane 45.43 45.15
TraesCS7D01G244000.1 Wheat plasma membrane 45.43 45.15
TraesCS7B01G146100.1 Wheat plasma membrane 45.27 44.99
GSMUA_Achr6P03450_001 Banana plastid 42.48 44.55
Os08t0506400-01 Rice plasma membrane 45.27 44.44
Zm00001d031437_P001 Maize plasma membrane 45.27 44.11
KXG25642 Sorghum plasma membrane 45.43 43.93
CDX96089 Canola plasma membrane 43.88 39.53
CDY01814 Canola plasma membrane 44.03 39.44
CDX84980 Canola plasma membrane 39.22 36.19
CDY42116 Canola plasma membrane 38.91 36.06
CDX77808 Canola plasma membrane 36.12 33.05
CDY52887 Canola plasma membrane 34.26 32.17
CDY17688 Canola plasma membrane 36.9 30.59
CDX96124 Canola cytosol 5.89 30.4
CDX75411 Canola plasma membrane 34.57 29.89
CDY52422 Canola plasma membrane 33.33 29.86
CDX69035 Canola plasma membrane 34.57 29.85
CDY54466 Canola plasma membrane 33.02 29.67
CDX69286 Canola plasma membrane 33.95 29.05
CDX75634 Canola plasma membrane 33.33 28.33
CDY38934 Canola plasma membrane 33.18 27.94
CDX96123 Canola plasma membrane 16.9 27.74
CDX89556 Canola plasma membrane 32.87 27.71
CDY69287 Canola mitochondrion 14.11 26.15
CDY01423 Canola plasma membrane 32.56 19.76
CDY12827 Canola plasma membrane 32.56 19.76
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078ICY1UniProt:A0A078ICY1
EnsemblPlants:CDY47962ProteinID:CDY47962ProteinID:CDY47962.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00088586001InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF07714
PFAM:PF08263PFAM:PF13855PRINTS:PR00019PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF41
InterPro:Prot_kinase_domSUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-noTMUniParc:UPI0004EE9FFE
SEG:seg:::::
Description
BnaA04g24400DBnaA04g24400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICY1]
Coordinates
chrLK032747:-:10151..12718
Molecular Weight (calculated)
70848.6 Da
IEP (calculated)
7.838
GRAVY (calculated)
-0.211
Length
645 amino acids
Sequence
(BLAST)
001: MKFRWILPLL VSSISLCMTL CSSLNSDGLS LLALKSAVDN DPTKVMNHWS ESDQTPCHWS GVACTNGRVT SLNLFGKSLS GYIPSELGLL DSLNRLDLAH
101: NNFSKPVPVR LFEPTNLRYI DLSHNSLSGP IPDQIRHLKS LNHLDLSSNR LNGSLPESLA ELGSLAGTLN LSFNRFAGEI PPSYGRLPLH VTLDLSYNNL
201: TGKVPQVGSL LNQGPFAFAG NSRLCGFPLQ TPCQELEIPN LVAVKPEGTQ ELQKPNPSVI SKEEGKEKQT TGSVTVSLIS GVSVVIGAVS LSVWLIRRKH
301: SSSAVYKAEP KTVVTEFDEE GQDGKFVAFG EGFELDLEDL LRASAYVLGK SRSGIVYRVV AAEAEPSSSS SAAVVAVRRL SDGNATWRFK EFENEVENIG
401: RVSHPNIVRL RAYYYAEDEK LLITDYISNG SLYSALHGGP PNTRPLLSWA ERLHIAQGTA RGLMYIHEYS SRKYIHGNLK SSKVLLDDEL LPHISGFGLT
501: RLVQGYPKLP DHSLSTNVQR FATRLSAPPQ AAYLAPEARA SSRYKSSQKC DVYSFGVILL ELLTGRLPDG SSENEGEELV SVVRKWHKEG RSLAEILDPK
601: LLNQELTDKQ VIAAIRVALN CTNMDPEMRP RMRSVSESLG RIKTV
Best Arabidopsis Sequence Match ( AT2G42290.1 )
(BLAST)
001: MKLPSILSLV VSSIFLCMSF CSSLNSDGLS LLALKSAVDN DPTRVMTHWS ESDPTPCHWS GIVCTNGRVT TLVLFGKSLS GYIPSELGLL NSLNRLDLAH
101: NNFSKTIPVR LFEATKLRYI DLSHNSLSGP IPAQIKSMKS LNHLDFSSNH LNGSLPESLT ELGSLVGTLN FSFNQFTGEI PPSYGRFRVH VSLDFSHNNL
201: TGKVPQVGSL LNQGPNAFAG NSHLCGFPLQ TPCEKIKTPN FVAAKPEGTQ ELQKPNPSVI SNDDAKEKKQ QITGSVTVSL ISGVSVVIGA VSLSVWLIRR
301: KRSSDGYNSE TKTTTVVSEF DEEGQEGKFV AFDEGFELEL EDLLRASAYV IGKSRSGIVY RVVAAESSST VVAVRRLSDG NDTWRFKDFV NEVESIGRIN
401: HPNIVRLRAY YYAEDEKLLI TDFINNGSLY SALHGGPSNT RPTLSWAERL CIAQGTARGL MYIHEYSSRK YVHGNLKSSK ILLDNELHPH VSGFGLTRLV
501: SGYPKVTDHS LSSMTQSIDQ GFATRLSVSA PAAAYLAPEA RASSDCKLSH KCDVYSFGVI LLELLTGRLP YGSSENEGEE ELVNVLRKWH KEERSLAEIL
601: DPKLLKQDFA NKQVIATIHV ALNCTEMDPD MRPRMRSVSE ILGRIK
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SLD0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.