Factsheet for PGSC0003DMT400033662

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g064010.2.1	Tomato	plasma membrane	93.14	92.99
VIT_08s0007g07820.t01	Wine grape	plasma membrane	66.35	65.0
KRH67019	Soybean	vacuole	61.88	59.97
Bra007361.1-P	Field mustard	cytosol	31.26	59.76
CDX71990	Canola	cytosol	31.1	59.45
KRG95336	Soybean	extracellular, plasma membrane, vacuole	61.72	59.45
CDX71991	Canola	vacuole	23.13	58.47
Bra016885.1-P	Field mustard	plastid	56.62	56.8
KRH71886	Soybean	plasma membrane	57.58	56.06
CDY06072	Canola	plasma membrane	57.74	56.04
AT3G57830.1	Thale cress	plasma membrane	58.85	55.74
CDY47962	Canola	plasma membrane	56.78	55.19
AT2G42290.1	Thale cress	plasma membrane	56.62	54.95
CDY14823	Canola	plasma membrane	55.98	54.84
GSMUA_Achr3P11100_001	Banana	plasma membrane	44.18	47.68
GSMUA_Achr6P03450_001	Banana	plastid	45.61	46.5
Os08t0506400-01	Rice	plasma membrane	47.37	45.21
Zm00001d031437_P001	Maize	plasma membrane	47.37	44.86
TraesCS7D01G244000.1	Wheat	plasma membrane	46.25	44.68
KXG25642	Sorghum	plasma membrane	47.53	44.68
TraesCS7B01G146100.1	Wheat	plasma membrane	46.09	44.53
TraesCS7A01G245400.1	Wheat	plasma membrane	45.93	44.38
PGSC0003DMT400038616	Potato	mitochondrion	44.18	40.62
PGSC0003DMT400078542	Potato	plasma membrane	38.44	33.75
PGSC0003DMT400066550	Potato	endoplasmic reticulum, plasma membrane	14.19	29.37
PGSC0003DMT400066225	Potato	plasma membrane	34.13	27.76
PGSC0003DMT400064235	Potato	plasma membrane	33.81	27.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1AZG3
PFAM:PF00560	PFAM:PF07714	PFAM:PF08263	EnsemblPlantsGene:PGSC0003DMG400012929	PGSC:PGSC0003DMG400012929	EnsemblPlants:PGSC0003DMT400033662
PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF41	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI000295E390	SEG:seg	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012929]

Coordinates

chr3:-:19830701..19835003

Molecular Weight (calculated)

68536.5 Da

IEP (calculated)

7.823

GRAVY (calculated)

-0.068

Length

627 amino acids

Sequence
(BLAST)

001: MNVVVVVILS FFTFSISVIF SLNSDGVSLL ALKSAISNDP SEFLSSWSEL DSSACHWNGI TCDENQKVTS ISLSSKNLSG YIPSEIGALS SLSIISLSYN
101: NFSKPIPIHL FNATSLHSLD LSNNAFTGFL PQQITSLINL KHLDLSANFL NGSLPKELTH LTLLTGTLNL SYNRFTGQLP ASYGKFPVTL SLDLRHNNLT
201: GKIPSIGSLL NQGPTAFSGN PFLCGFPLET PCAEPEAQKL PPNPNPNEEE VGFVGKRKSG NGSMVVSLLS GVSVVIGVMF VSVLVLRRKW KLDEDKIGKE
301: KLEKPEEGQK GKYVVLDEGF GMELEDLLRA SAYVVGKSRS GIVYKVVAGA TVVAVRRLSE GDVTWKFKEF ETEVEAIGRV QHPNVVRLRA YYYASDEKLL
401: VTDFIRNGTL HNALHGGLGN NLPPMSWAAR LKIAQGTARG LMHIHECNPR KYVHGNINST KILLDDDLQA YISGFGLTRL VSGCSKAINS STKKLSTSQI
501: IISPQNSTSS CTMYMAPEGR VPGSKFTQKS DIYSFGMVLL EILTGQLTDG GSEVEDDGKG LESLVRKVFR QERPLSEIID PALLNEVHAK KQVVAAFHIA
601: LNCTELDPEL RPRMRTVSDN LDRIKLQ

Best Arabidopsis Sequence Match ( AT3G57830.1 )
(BLAST)

001: MQFLRLLTLL VSSYFFFFIN FSSSLNPDGL SLLALKSAIL RDPTRVMTSW SESDPTPCHW PGIICTHGRV TSLVLSGRRL SGYIPSKLGL LDSLIKLDLA
101: RNNFSKPVPT RLFNAVNLRY IDLSHNSISG PIPAQIQSLK NLTHIDFSSN LLNGSLPQSL TQLGSLVGTL NLSYNSFSGE IPPSYGRFPV FVSLDLGHNN
201: LTGKIPQIGS LLNQGPTAFA GNSELCGFPL QKLCKDEGTN PKLVAPKPEG SQILPKKPNP SFIDKDGRKN KPITGSVTVS LISGVSIVIG AVSISVWLIR
301: RKLSSTVSTP EKNNTAAPLD DAADEEEKEG KFVVMDEGFE LELEDLLRAS AYVVGKSRSG IVYRVVAGMG SGTVAATFTS STVVAVRRLS DGDATWRRKD
401: FENEVEAISR VQHPNIVRLR AYYYAEDERL LITDYIRNGS LYSALHGGPS NTLPSLSWPE RLLIAQGTAR GLMYIHEYSP RKYVHGNLKS TKILLDDELL
501: PRISGFGLTR LVSGYSKLIG SLSATRQSLD QTYLTSATTV TRITAPTVAY LAPEARASSG CKLSQKCDVY SFGVVLMELL TGRLPNASSK NNGEELVRVV
601: RNWVKEEKPL SEILDPEILN KGHADKQVIA AIHVALNCTE MDPEVRPRMR SVSESLGRIK SD

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.