Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06072 | Canola | plasma membrane | 92.34 | 35.45 |
| AT3G57830.1 | Thale cress | plasma membrane | 84.27 | 31.57 |
| CDY14823 | Canola | plasma membrane | 71.77 | 27.81 |
| CDY47962 | Canola | plasma membrane | 71.37 | 27.44 |
| VIT_08s0007g07820.t01 | Wine grape | plasma membrane | 62.5 | 24.22 |
| CDX96123 | Canola | plasma membrane | 37.5 | 23.66 |
| KRH67019 | Soybean | vacuole | 61.29 | 23.49 |
| PGSC0003DMT400033662 | Potato | plasma membrane | 58.47 | 23.13 |
| KRG95336 | Soybean | extracellular, plasma membrane, vacuole | 59.68 | 22.73 |
| Solyc03g064010.2.1 | Tomato | plasma membrane | 57.26 | 22.61 |
| GSMUA_Achr6P03450_001 | Banana | plastid | 51.61 | 20.81 |
| KRH71886 | Soybean | plasma membrane | 53.23 | 20.5 |
| GSMUA_Achr3P11100_001 | Banana | plasma membrane | 47.98 | 20.48 |
| TraesCS7A01G245400.1 | Wheat | plasma membrane | 46.37 | 17.72 |
| TraesCS7B01G146100.1 | Wheat | plasma membrane | 46.37 | 17.72 |
| TraesCS7D01G244000.1 | Wheat | plasma membrane | 46.37 | 17.72 |
| Os08t0506400-01 | Rice | plasma membrane | 46.77 | 17.66 |
| Zm00001d031437_P001 | Maize | plasma membrane | 46.37 | 17.37 |
| KXG25642 | Sorghum | plasma membrane | 46.37 | 17.24 |
| CDX96089 | Canola | plasma membrane | 47.58 | 16.48 |
| CDY01814 | Canola | plasma membrane | 47.58 | 16.39 |
| CDX84980 | Canola | plasma membrane | 41.94 | 14.88 |
| CDY42116 | Canola | plasma membrane | 41.13 | 14.66 |
| CDY52887 | Canola | plasma membrane | 38.71 | 13.97 |
| CDY52422 | Canola | plasma membrane | 40.32 | 13.89 |
| CDX77808 | Canola | plasma membrane | 38.71 | 13.62 |
| CDY54466 | Canola | plasma membrane | 39.11 | 13.51 |
| CDX75411 | Canola | plasma membrane | 40.32 | 13.4 |
| CDX69035 | Canola | plasma membrane | 40.32 | 13.39 |
| CDY17688 | Canola | plasma membrane | 40.73 | 12.98 |
| CDX69286 | Canola | plasma membrane | 38.71 | 12.73 |
| CDX89556 | Canola | plasma membrane | 38.31 | 12.42 |
| CDY38934 | Canola | plasma membrane | 38.31 | 12.4 |
| CDX75634 | Canola | plasma membrane | 37.9 | 12.38 |
| CDY01423 | Canola | plasma membrane | 37.9 | 8.84 |
| CDY12827 | Canola | plasma membrane | 37.5 | 8.75 |
| Bra007361.1-P | Field mustard | cytosol | 3.23 | 2.44 |
| CDX71990 | Canola | cytosol | 3.23 | 2.44 |
| CDY69287 | Canola | mitochondrion | 2.02 | 1.44 |
| CDX96124 | Canola | cytosol | 0.4 | 0.8 |
Protein Annotations
| EnsemblPlants:CDX71991 | EnsemblPlantsGene:GSBRNA2T00155762001 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_4 | PANTHER:PTHR27008 | PANTHER:PTHR27008:SF41 | PFAM:PF08263 | PFAM:PF12799 | PRINTS:PR00019 |
| ProteinID:CDX71991 | ProteinID:CDX71991.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52058 | UniParc:UPI0004EDDBBB |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC08g28830D
Coordinates
chrLK031795:-:1669532..1670439
Molecular Weight (calculated)
27143.7 Da
IEP (calculated)
9.851
GRAVY (calculated)
-0.008
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIHRLLSLL VSSIFFHFIS FSSSLNHDGL SLLALKSAVA HDPTRVMTSW SESDQTPCHW PGITCTRGRV TSLILSGRRL SGYIPSELGL LDSLTRLELS
101: RNNFSEPVPT RLFNAVNLRY IDLSHNSITG PVPAQIKALK NLTHLDVSSN RLNGSLPESL TQLGSLVGTL NLSYNRFSGE IPPSYGRFPV FVSLDLGHNI
201: LTGKIPQIGS LLNQGPTAFA GNSDLCGFPL QKIGFSLRMA DSKKTELR
101: RNNFSEPVPT RLFNAVNLRY IDLSHNSITG PVPAQIKALK NLTHLDVSSN RLNGSLPESL TQLGSLVGTL NLSYNRFSGE IPPSYGRFPV FVSLDLGHNI
201: LTGKIPQIGS LLNQGPTAFA GNSDLCGFPL QKIGFSLRMA DSKKTELR
001: MQFLRLLTLL VSSYFFFFIN FSSSLNPDGL SLLALKSAIL RDPTRVMTSW SESDPTPCHW PGIICTHGRV TSLVLSGRRL SGYIPSKLGL LDSLIKLDLA
101: RNNFSKPVPT RLFNAVNLRY IDLSHNSISG PIPAQIQSLK NLTHIDFSSN LLNGSLPQSL TQLGSLVGTL NLSYNSFSGE IPPSYGRFPV FVSLDLGHNN
201: LTGKIPQIGS LLNQGPTAFA GNSELCGFPL QKLCKDEGTN PKLVAPKPEG SQILPKKPNP SFIDKDGRKN KPITGSVTVS LISGVSIVIG AVSISVWLIR
301: RKLSSTVSTP EKNNTAAPLD DAADEEEKEG KFVVMDEGFE LELEDLLRAS AYVVGKSRSG IVYRVVAGMG SGTVAATFTS STVVAVRRLS DGDATWRRKD
401: FENEVEAISR VQHPNIVRLR AYYYAEDERL LITDYIRNGS LYSALHGNLL IFINQPLIMR LISILFYESW C
101: RNNFSKPVPT RLFNAVNLRY IDLSHNSISG PIPAQIQSLK NLTHIDFSSN LLNGSLPQSL TQLGSLVGTL NLSYNSFSGE IPPSYGRFPV FVSLDLGHNN
201: LTGKIPQIGS LLNQGPTAFA GNSELCGFPL QKLCKDEGTN PKLVAPKPEG SQILPKKPNP SFIDKDGRKN KPITGSVTVS LISGVSIVIG AVSISVWLIR
301: RKLSSTVSTP EKNNTAAPLD DAADEEEKEG KFVVMDEGFE LELEDLLRAS AYVVGKSRSG IVYRVVAGMG SGTVAATFTS STVVAVRRLS DGDATWRRKD
401: FENEVEAISR VQHPNIVRLR AYYYAEDERL LITDYIRNGS LYSALHGNLL IFINQPLIMR LISILFYESW C
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.