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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 8
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX74635
CDY47297

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G15300.1 CDX74635 AT5G35750.1 18642946
AT2G15300.1 CDY47297 AT5G35750.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY54466 Canola plasma membrane 94.31 94.57
AT2G15300.1 Thale cress plasma membrane 75.69 73.25
CDX69035 Canola plasma membrane 66.39 63.99
CDX75411 Canola plasma membrane 65.14 62.87
CDY69287 Canola mitochondrion 28.89 59.77
Zm00001d008868_P001 Maize endoplasmic reticulum, extracellular, plastid 5.56 57.14
Zm00001d045902_P001 Maize cytosol 8.06 51.79
PGSC0003DMT400066550 Potato endoplasmic reticulum, plasma membrane 20.69 49.17
VIT_03s0180g00150.t01 Wine grape plasma membrane 50.69 48.28
KRH33257 Soybean cytosol, golgi, plasma membrane 20.14 47.54
KRG91028 Soybean plasma membrane 50.69 47.1
GSMUA_Achr4P12930_001 Banana plasma membrane, vacuole 37.5 46.88
GSMUA_Achr8P25210_001 Banana plasma membrane 44.31 46.64
KRH35733 Soybean plasma membrane 50.14 46.28
Solyc01g107650.2.1 Tomato plasma membrane 48.19 45.01
GSMUA_Achr9P22590_001 Banana plasma membrane 40.14 43.79
GSMUA_Achr3P28250_001 Banana mitochondrion 34.58 42.86
CDX69286 Canola plasma membrane 43.89 41.91
CDX75634 Canola plasma membrane 43.89 41.63
GSMUA_Achr4P09420_001 Banana plasma membrane 39.17 41.29
CDX89556 Canola plasma membrane 43.19 40.65
CDY38934 Canola plasma membrane 43.06 40.47
CDX71991 Canola vacuole 13.89 40.32
Os09t0110100-01 Rice plasma membrane 40.69 36.9
TraesCS5B01G158000.1 Wheat plasma membrane 40.83 36.21
TraesCS5D01G165400.1 Wheat plasma membrane 40.83 36.21
TraesCS5A01G160500.1 Wheat plasma membrane 40.83 36.12
EER90087 Sorghum plasma membrane 43.33 35.99
Zm00001d005298_P001 Maize mitochondrion, plasma membrane 41.25 35.83
EER98554 Sorghum plasma membrane 41.94 35.78
Zm00001d019701_P001 Maize plasma membrane 40.83 35.59
Zm00001d046626_P001 Maize plasma membrane 41.25 35.23
Os06t0638500-00 Rice plasma membrane 42.5 34.93
CDX77808 Canola plasma membrane 34.17 34.89
CDY42116 Canola plasma membrane 33.47 34.63
CDX84980 Canola plasma membrane 33.61 34.62
CDY01814 Canola plasma membrane 34.03 34.03
CDX96089 Canola plasma membrane 33.75 33.94
TraesCS7D01G512900.1 Wheat plasma membrane 40.56 33.56
TraesCS7A01G523900.1 Wheat plasma membrane 40.42 33.41
CDY47962 Canola plasma membrane 29.86 33.33
CDY06072 Canola plasma membrane 29.86 33.28
TraesCS7B01G441200.1 Wheat plasma membrane 40.56 33.26
HORVU7Hr1G116470.2 Barley plasma membrane 40.42 33.26
CDX71990 Canola cytosol 15.0 32.93
CDY14823 Canola plasma membrane 29.17 32.81
CDY52887 Canola plasma membrane 31.25 32.75
CDY17688 Canola plasma membrane 34.44 31.88
CDX96123 Canola plasma membrane 15.97 29.26
CDY01423 Canola plasma membrane 42.5 28.79
CDY12827 Canola plasma membrane 42.08 28.5
CDX96124 Canola cytosol 4.58 26.4
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078IR29UniProt:A0A078IR29
EnsemblPlants:CDY52422ProteinID:CDY52422ProteinID:CDY52422.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00006875001InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069
PFAM:PF08263PFAM:PF13855PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF42InterPro:Prot_kinase_dom
SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE6ED9SEG:seg
Description
BnaCnng22430DBnaCnng22430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IR29]
Coordinates
chrLK033084:+:73668..76475
Molecular Weight (calculated)
79104.6 Da
IEP (calculated)
6.675
GRAVY (calculated)
-0.152
Length
720 amino acids
Sequence
(BLAST)
001: MTSHRRDLSN HFIFHLLLLI LLPTLLQALN TDGVLLLSFK YTITSDPLSV LQNWNYDDET PCSWTGVTCT ELGSPNTPDM SRVTSLALPN KQLLGSVPPS
101: LFSITNLGIL DLSNNFFHGS LPDTLSNATQ LRVLSLGNNN VSGQVPESIT NVATLQLLNL SANAITGKIP QDLSLLNNLT VLDISSNHLD GSLPPDLQGT
201: SLHYLNLSHN QISGDIYPTF AQKVPASIIL DLSFNNLTGP IPSTPPMLNQ RAESFLGNLG LCGQPLKTPC LIPSTLSDPQ NISDTTSPAI AVMPRSSSPP
301: TNPSPESPPN QSKLKPTTIV GITVADIAGL AIIATFILYV YQLRKRRSYQ EYSTFKVLKD CLEKNDTLSA KKETVFALEV TQSPVAKPGW GSCLTGRYDE
401: TSSESSDVEN QIQDRKTVDS LKRDGETQLV TVDGETKLEL ETLLKASAYV LGTSRGGIVY KAVLENGAAF AVRRIGAESC TAVKLKEFER EVQGIAKLRH
501: PNLVRVRGFV WGREEKLLIS DYVPNGSLHC SSIYSKSGSS STSSPNPLPF KARLKIARGI ARGIAYIHDK KHVHGNIKPN NILFDSEFEP IITDTGLDRL
601: MTPAHPLIAG PASGSQHHPP EWSTSEKPNP RWDVYSFGVV FLELLMGRVF LVDRDFVRES EVDEKSWFLR LVDGSINSDM AYYEDEVVAC FRLTYRCVSS
701: LPQKRPFMKE VVQVLEKISV
Best Arabidopsis Sequence Match ( AT2G15300.1 )
(BLAST)
001: MTSNRSNLFL HLLLLHLPTL IQALNTDGVA LLSFKYSILN DPLLVLRNWN YDDETPCSWT GVTCTELGIP NTPDMFRVTS LVLPNKQLLG SVSPDLFSIL
101: HLRILDLSDN FFHGSLPDSV SNASELRILS LGNNKVSGEL PRSISNVASL QLLNLSANAL TGKIPPNLSL PKNLTVISLA KNSFSGDIPS GFEAVQVLDI
201: SSNLLDGSLP PDFRGTSLLY LNLSNNQISG MISPPFAEKF PASAIIDLSF NNLTGPIPNT PPLLNQKTES FSGNIGLCGQ PLKTLCSIPS TLSDPPNISE
301: TTSPAIAVMP TTPTPTNSST ESTNQTAKSK LKPSTIIGIT LADIAGLAII AMFILYIYQL KKRRSYQEYS TFNVLQKCLE KNDTLSVKKS KHNVADALEF
401: TKSPPAKMGC GSWISRRYEE TTSVSSESDI ENQKPVEAFD RTGGGRVKHN TETQLVTVDG ETQLELDTLL KASAYVLGTN RSDGIVYKAV LENGAAFAVR
501: RIGAESCPAA KFKEFEKEVQ GIAKLRHPNL VRVRGFVWGK EEKLLISDYV PNGNLPLSSI SAKSSSFSHK PLSFEARLKL ARGIARGIAY IHDKKHVHGN
601: IKANNILLDS EFEPVITDMG LDRIMTSAHL LTDGPLSSLQ DQPPEWSTSQ KPNPKWDVYS FGVILLELLT GIVFSVDRDL VRDSETDEKS WFLKLVDGEI
701: RVEVAHREDE AVACLKLGYE CVSSLPQKRP SMKEVVQVLE KMFV
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SHU6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.