Factsheet for GSMUA_Achr8P25210_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
plasma membrane 4
extracellular 2
golgi 2
endoplasmic reticulum 2
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P22740_001
GSMUA_Achr4P17470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15300.1	GSMUA_Achr1P22740_001	AT5G35750.1	18642946
AT2G15300.1	GSMUA_Achr4P17470_001	AT5G35750.1	18642946
AT2G15300.1	GSMUA_AchrUn_...	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	8.19	80.0
GSMUA_Achr4P09420_001	Banana	plasma membrane	71.05	71.16
Zm00001d045902_P001	Maize	cytosol	11.55	70.54
GSMUA_Achr4P12930_001	Banana	plasma membrane, vacuole	57.6	68.4
GSMUA_Achr9P22590_001	Banana	plasma membrane	64.33	66.67
GSMUA_Achr3P28250_001	Banana	mitochondrion	55.85	65.75
PGSC0003DMT400066550	Potato	endoplasmic reticulum, plasma membrane	22.08	49.84
VIT_03s0180g00150.t01	Wine grape	plasma membrane	54.39	49.21
VIT_07s0129g01070.t01	Wine grape	plasma membrane	56.14	49.17
EER90087	Sorghum	plasma membrane	62.28	49.13
Os06t0638500-00	Rice	plasma membrane	62.72	48.97
KRH04528	Soybean	plasma membrane	53.8	48.36
KRH57974	Soybean	plasma membrane	53.8	47.79
Zm00001d046626_P001	Maize	plasma membrane	58.48	47.45
KRG91028	Soybean	plasma membrane	53.66	47.35
CDX89556	Canola	plasma membrane	52.78	47.19
PGSC0003DMT400066225	Potato	plasma membrane	53.07	47.08
CDY38934	Canola	plasma membrane	52.63	47.0
Solyc01g107650.2.1	Tomato	plasma membrane	52.78	46.82
PGSC0003DMT400064235	Potato	plasma membrane	52.49	46.74
Bra032175.1-P	Field mustard	plasma membrane	52.34	46.74
Solyc02g092940.2.1	Tomato	plasma membrane	52.34	46.61
Os09t0110100-01	Rice	plasma membrane	53.95	46.47
KRH35733	Soybean	plasma membrane	52.78	46.28
AT2G23300.1	Thale cress	plasma membrane	52.05	46.05
CDX69286	Canola	plasma membrane	50.58	45.89
AT4G37250.1	Thale cress	plasma membrane	51.46	45.83
Bra012148.1-P	Field mustard	plasma membrane	49.27	45.6
CDX75634	Canola	plasma membrane	50.58	45.59
TraesCS7A01G523900.1	Wheat	plasma membrane	57.89	45.47
Bra011747.1-P	Field mustard	plasma membrane	50.44	45.34
AT2G15300.1	Thale cress	plasma membrane	49.27	45.3
TraesCS7D01G512900.1	Wheat	plasma membrane	57.46	45.17
HORVU7Hr1G116470.2	Barley	plasma membrane	57.75	45.14
AT5G67280.1	Thale cress	plasma membrane	49.42	45.01
TraesCS7B01G441200.1	Wheat	plasma membrane	57.75	44.99
TraesCS5D01G165400.1	Wheat	plasma membrane	53.36	44.95
CDX69035	Canola	plasma membrane	48.83	44.71
TraesCS5B01G158000.1	Wheat	plasma membrane	53.07	44.7
TraesCS5A01G160500.1	Wheat	plasma membrane	52.92	44.47
CDX75411	Canola	plasma membrane	48.39	44.37
CDY52422	Canola	plasma membrane	46.64	44.31
Bra011508.1-P	Field mustard	plasma membrane	48.1	44.1
Bra039836.1-P	Field mustard	plasma membrane	46.2	44.07
KRH33257	Soybean	cytosol, golgi, plasma membrane	19.59	43.93
CDY54466	Canola	plasma membrane	45.91	43.73
AT4G34220.1	Thale cress	plasma membrane	48.1	43.46
EER98554	Sorghum	plasma membrane	53.51	43.36
Zm00001d019701_P001	Maize	plasma membrane	51.75	42.86
Zm00001d005298_P001	Maize	mitochondrion, plasma membrane	51.46	42.46
GSMUA_Achr3P21080_001	Banana	plasma membrane	32.75	41.33
GSMUA_Achr8P18330_001	Banana	plasma membrane	32.31	41.23
GSMUA_Achr4P06720_001	Banana	plasma membrane	35.53	40.3
GSMUA_Achr3P29400_001	Banana	plasma membrane	34.36	39.63
GSMUA_Achr9P21500_001	Banana	plasma membrane	35.53	39.38
CDY69287	Canola	mitochondrion	20.03	39.37
GSMUA_Achr1P13440_001	Banana	plasma membrane	30.12	36.14
GSMUA_Achr3P11100_001	Banana	plasma membrane	29.82	35.11
GSMUA_Achr6P03450_001	Banana	plastid	30.41	33.82
CDY01423	Canola	plasma membrane	50.0	32.17
CDY12827	Canola	plasma membrane	49.27	31.7
GSMUA_Achr6P28540_001	Banana	vacuole	24.56	25.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G25210_001
EnsemblPlants:GSMUA_Achr8P25210_001	EnsemblPlants:GSMUA_Achr8T25210_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0TTH4	PFAM:PF00069	PFAM:PF00560
PFAM:PF08263	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF42	InterPro:Prot_kinase_dom	SUPFAM:SSF52058
SUPFAM:SSF56112	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0002960CEF	SEG:seg	:

Description

Putative Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:GMGC_GENE;Acc:GSMUA_Achr8G25210_001]

Coordinates

chr8:+:29105226..29108451

Molecular Weight (calculated)

74069.2 Da

IEP (calculated)

7.045

GRAVY (calculated)

-0.036

Length

684 amino acids

Sequence
(BLAST)

001: MSSQSRRLQT KWQITSYLPL LLSFLLLISP ALGLNQDGVL LLKFKYSILS DPLAALGDWN YYDATPCSWN GVVPTSSRVI SLVLPNSQLL GSVPPELGLV
101: EHLRHLDLSG NILNGTLPAS LFNASEVRVL SLADNAISGE LPELDWRMSS SLQVLNLSDN ALIGRLPGNL SRLPNLTVVS LANNFLYGEL PGGGFERLQY
201: LDLSSNLING SLPSDLGGPR VRYLNLSYNR LTGAIPPQLG ASISASATVD LSFNNLTGEI PQGGAFAAEK PMAFMGNPSL CGRPLRNPCA IPSIPSAGRG
301: SLRPAAVIGI TVGDLAVIGI LFIVFLYVYH VKKKRSQEQQ KEETSETSES SETEAEEEEA TKGTKEGEDG KSHPQQKEQG ATLVMVDGET ELEMETLLKA
401: SAYILGASAS SIVYKAVLAD GTALAVRRIG ESGVIDKLKD FGAQVRVIAK FRHPNLLRLR GFYWGTEEKL LIHDYAPSGS LANISFSKKL GSSPLHLSWE
501: ARLRIARGVA RGLAYIHEKK SLHGNLKPSN ILLDSDMEPK IGDFGLDRVM FGVGTPSVGS SALTFAPRPY QAPESLRNLK PNTKWDVYSF GMVLLELIAG
601: RVFSEVELCH WNAGFVVEER NRLLRMADAG IRGEVEGKEA ALLSCFKLGF ACCAMAPQRR PSMKDAVQVL ENISSSSSSS LPYP

Best Arabidopsis Sequence Match ( AT4G37250.1 )
(BLAST)

001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN
101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP
201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI
301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR
401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG
501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER
601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH
701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.