Factsheet for Solyc02g092940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 9
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064235	Potato	plasma membrane	95.57	95.57
VIT_07s0129g01070.t01	Wine grape	plasma membrane	65.49	64.4
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	5.86	64.29
KRH04528	Soybean	plasma membrane	60.29	60.84
KRH57974	Soybean	plasma membrane	59.24	59.09
Zm00001d045902_P001	Maize	cytosol	8.59	58.93
CDX89556	Canola	plasma membrane	57.29	57.52
CDY38934	Canola	plasma membrane	57.16	57.31
AT2G23300.1	Thale cress	plasma membrane	57.55	57.18
Bra032175.1-P	Field mustard	plasma membrane	56.9	57.05
CDX75634	Canola	plasma membrane	55.6	56.26
CDX69286	Canola	plasma membrane	55.21	56.23
AT4G37250.1	Thale cress	plasma membrane	55.73	55.73
Bra011747.1-P	Field mustard	plasma membrane	55.21	55.72
Bra012148.1-P	Field mustard	plasma membrane	52.6	54.67
AT5G67280.1	Thale cress	plasma membrane	52.34	53.53
GSMUA_Achr4P12930_001	Banana	plasma membrane, vacuole	39.71	52.95
GSMUA_Achr8P25210_001	Banana	plasma membrane	46.61	52.34
Solyc01g107650.2.1	Tomato	plasma membrane	52.21	52.01
GSMUA_Achr9P22590_001	Banana	plasma membrane	43.88	51.06
GSMUA_Achr3P28250_001	Banana	mitochondrion	38.15	50.43
Os09t0110100-01	Rice	plasma membrane	47.53	45.97
GSMUA_Achr4P09420_001	Banana	plasma membrane	40.76	45.83
TraesCS5B01G158000.1	Wheat	plasma membrane	45.96	43.47
TraesCS5A01G160500.1	Wheat	plasma membrane	45.96	43.37
TraesCS5D01G165400.1	Wheat	plasma membrane	45.83	43.35
EER98554	Sorghum	plasma membrane	45.96	41.82
EER90087	Sorghum	plasma membrane	47.01	41.64
Zm00001d005298_P001	Maize	mitochondrion, plasma membrane	44.79	41.5
Os06t0638500-00	Rice	plasma membrane	46.88	41.1
Zm00001d019701_P001	Maize	plasma membrane	43.62	40.56
Zm00001d046626_P001	Maize	plasma membrane	44.4	40.45
TraesCS7D01G512900.1	Wheat	plasma membrane	44.66	39.43
TraesCS7A01G523900.1	Wheat	plasma membrane	44.27	39.04
TraesCS7B01G441200.1	Wheat	plasma membrane	44.27	38.72
HORVU7Hr1G116470.2	Barley	plasma membrane	43.88	38.51
CDY01423	Canola	plasma membrane	52.99	38.29
Solyc05g008860.2.1	Tomato	extracellular	35.55	38.18
CDY12827	Canola	plasma membrane	52.21	37.72
Solyc05g015150.2.1	Tomato	plasma membrane	33.33	35.7
Solyc03g064010.2.1	Tomato	plasma membrane	27.6	33.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	UniProt:K4BD90	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PFscan:PS50011	PANTHER:PTHR27008
PANTHER:PTHR27008:SF35	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g092940.2
EnsemblPlants:Solyc02g092940.2.1	TMHMM:TMhelix	UniParc:UPI00027682FF	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:+:53910737..53914166

Molecular Weight (calculated)

83556.4 Da

IEP (calculated)

7.023

GRAVY (calculated)

-0.225

Length

768 amino acids

Sequence
(BLAST)

001: MKFQMFDLLV LLFLLLEYQA CGLNNDGLLL LTFKYNILSD PLSVLQNWNS WDDTPCSWKG VGCGNPNASD PNLRVTNLSL PNSQLLGSIP SSLGMIQYLT
101: NLDLSNNSIN GSIPLTLFSA PDLQRLDFSN NRISGQLPEL VGHLNNLQFL NLSGNALTGR LPENLTRLSN LTVVSLKDNY FFGSVPFGFD SVQVLDLSSN
201: LINGSLPPNF GGSNLRYFNA SFNRLSGDIP PEFGSKIPPN ATIDLSYNNI SGAIPESVVF INQNRKAFSG NPELCGAPLK NLCPIPSTVT SLPNSAEPTS
301: SPAIAAIPKP IDSNPAAESP KEGKNGLRTG TIIGIIAGDI AAVGVLALIF MYVYRAKKKK RNIENNIKKE AETAKDFDWA SSASSEEYNW LRSWTCLNKP
401: RHGDEDELSE ASHSESETSQ LGHPQQNHVH TTGELVTVDG ERELELETLL KASAYILGAS GSSIMYKAVL EDGTTLAVRR IGESGVERFK DFENQVKLIA
501: KLVHTNLVKI RGFYWGAEEK LVIYDFVPNG SLANARYRKA GSSPCHVPWE FRLKIAKGVA RGLTYIHEKK HVHGNLKPSN ILLGADMEPK IGDFGIERLV
601: TGDSSHKTYG SARNFGSKRS TASRESFQDF TSGPTPSPSP SALGISPYHA PESLRSLKPN PKWDVFSFGV VLLELLTGKV IVSDEMGPAS VIGAATSAGE
701: EKSKVLRLAD VAIRADVEGK EDALLALMKV GYSCISPTPH KRPGMREVVQ ALEKFPTNST TSSYYYGP

Best Arabidopsis Sequence Match ( AT4G37250.1 )
(BLAST)

001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN
101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP
201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI
301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR
401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG
501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER
601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH
701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.