Factsheet for GSMUA_Achr9P22590_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P22740_001
GSMUA_Achr4P17470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15300.1	GSMUA_Achr1P22740_001	AT5G35750.1	18642946
AT2G15300.1	GSMUA_Achr4P17470_001	AT5G35750.1	18642946
AT2G15300.1	GSMUA_AchrUn_...	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P12930_001	Banana	plasma membrane, vacuole	62.73	71.88
Zm00001d008868_P001	Maize	endoplasmic reticulum, extracellular, plastid	7.58	71.43
Zm00001d045902_P001	Maize	cytosol	11.06	65.18
GSMUA_Achr3P28250_001	Banana	mitochondrion	56.97	64.72
GSMUA_Achr8P25210_001	Banana	plasma membrane	66.67	64.33
GSMUA_Achr4P09420_001	Banana	plasma membrane	57.42	55.49
PGSC0003DMT400066550	Potato	endoplasmic reticulum, plasma membrane	23.03	50.16
KRH33257	Soybean	cytosol, golgi, plasma membrane	22.42	48.52
VIT_03s0180g00150.t01	Wine grape	plasma membrane	54.55	47.62
EER90087	Sorghum	plasma membrane	59.85	45.56
VIT_07s0129g01070.t01	Wine grape	plasma membrane	53.79	45.45
Os06t0638500-00	Rice	plasma membrane	59.7	44.98
KRG91028	Soybean	plasma membrane	52.42	44.65
Os09t0110100-01	Rice	plasma membrane	53.64	44.58
TraesCS7A01G523900.1	Wheat	plasma membrane	58.79	44.55
Zm00001d046626_P001	Maize	plasma membrane	56.82	44.48
CDX89556	Canola	plasma membrane	51.52	44.44
KRH04528	Soybean	plasma membrane	51.06	44.28
TraesCS7D01G512900.1	Wheat	plasma membrane	58.33	44.25
KRH35733	Soybean	plasma membrane	52.27	44.23
HORVU7Hr1G116470.2	Barley	plasma membrane	58.64	44.23
PGSC0003DMT400066225	Potato	plasma membrane	51.67	44.23
TraesCS7B01G441200.1	Wheat	plasma membrane	58.79	44.19
CDY38934	Canola	plasma membrane	51.06	43.99
Solyc01g107650.2.1	Tomato	plasma membrane	51.36	43.97
Solyc02g092940.2.1	Tomato	plasma membrane	51.06	43.88
KRH57974	Soybean	plasma membrane	51.06	43.77
Bra032175.1-P	Field mustard	plasma membrane	50.76	43.73
Bra012148.1-P	Field mustard	plasma membrane	48.79	43.57
PGSC0003DMT400064235	Potato	plasma membrane	50.61	43.49
AT4G37250.1	Thale cress	plasma membrane	50.3	43.23
AT2G23300.1	Thale cress	plasma membrane	50.3	42.95
TraesCS5D01G165400.1	Wheat	plasma membrane	52.73	42.86
TraesCS5B01G158000.1	Wheat	plasma membrane	52.73	42.86
CDX69286	Canola	plasma membrane	48.79	42.71
CDX69035	Canola	plasma membrane	48.18	42.57
CDX75634	Canola	plasma membrane	48.94	42.56
TraesCS5A01G160500.1	Wheat	plasma membrane	52.27	42.38
CDX75411	Canola	plasma membrane	47.88	42.36
Bra011747.1-P	Field mustard	plasma membrane	48.79	42.31
Bra011508.1-P	Field mustard	plasma membrane	47.73	42.23
AT5G67280.1	Thale cress	plasma membrane	48.03	42.21
AT4G34220.1	Thale cress	plasma membrane	48.33	42.14
AT2G15300.1	Thale cress	plasma membrane	46.97	41.67
EER98554	Sorghum	plasma membrane	52.88	41.35
GSMUA_Achr3P21080_001	Banana	plasma membrane	33.79	41.14
GSMUA_Achr8P18330_001	Banana	plasma membrane	33.33	41.04
Zm00001d019701_P001	Maize	plasma membrane	50.91	40.68
Zm00001d005298_P001	Maize	mitochondrion, plasma membrane	51.06	40.65
CDY52422	Canola	plasma membrane	43.79	40.14
GSMUA_Achr9P21500_001	Banana	plasma membrane	37.42	40.03
Bra039836.1-P	Field mustard	plasma membrane	43.48	40.03
GSMUA_Achr3P29400_001	Banana	plasma membrane	35.91	39.97
CDY54466	Canola	plasma membrane	43.18	39.69
GSMUA_Achr4P06720_001	Banana	plasma membrane	35.0	38.31
GSMUA_Achr1P13440_001	Banana	plasma membrane	31.82	36.84
GSMUA_Achr3P11100_001	Banana	plasma membrane	31.52	35.8
CDY69287	Canola	mitochondrion	18.33	34.77
GSMUA_Achr6P03450_001	Banana	plastid	31.67	33.98
CDY01423	Canola	plasma membrane	48.79	30.29
CDY12827	Canola	plasma membrane	47.88	29.73
GSMUA_Achr6P28540_001	Banana	vacuole	27.12	27.58

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G22590_001	EnsemblPlants:GSMUA_Achr9P22590_001
EnsemblPlants:GSMUA_Achr9T22590_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0U2L8	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFAM:PF13855	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27008	PANTHER:PTHR27008:SF42	InterPro:Prot_kinase_dom
SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002955388	SEG:seg

Description

Putative Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:GMGC_GENE;Acc:GSMUA_Achr9G22590_001]

Coordinates

chr9:+:27695894..27698401

Molecular Weight (calculated)

69911.1 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.051

Length

660 amino acids

Sequence
(BLAST)

001: MSPKCNGTAA LLLSSLLLLL ELVLGLNHDG VLLLHFKHSI VSDPIAALRD WNYDDATPCS WNGASTASRV IGLVLPNSQL LGRIPPELGL VEHLRHLDLT
101: GNALNGTLPS SIFDASELHV LSLANNEISG ELPQLDGRTS SLQLLNLSDN ALVGTVPAGL SLLPNLTVVA LANNYLSGEL PGGGLGGIEY LDLSSNLING
201: YLPPDFGGQS LRYLNLSYNR IDGVIPPELA SKIPDNAIVD LAFNNLTGGI PQTGAFASQE PAAFAGNPDL CGKPLKNLCT IPSTLSNPPE TPSAPNGQAQ
301: GGLRPAVIIA IAVGDVVGIG VLFAVLYYVY HKGEEEEDSE ETSDSSASET EAEWEGPHEK GAKGEAGGRT PPQLKQQEAT LVAVDGETDL EMDTLLTASA
401: YILGATGSGI VYKAVLADGT ALAVRRIGES SAIDKLKYFD ALVRSIAKFR HPNVLRLRGY YWGADEKLLI HDHASNGSLA NVSFTKKPGS SPFHLSWESR
501: LRIVRGVARG LAYLHERKGV HGNVKPSNIL LDADMEPKIG DFGLDRLTSG DGGHRLGTSA RHPCGSSSAA PYQAPESLQN LKPNAKWDVY SFGVVLLELL
601: AGRVLSEAEL GQWNGGFAGE ERSRVVRVAD PGLRGEVEGK EEALLSCFKL GFACSAVDVQ

Best Arabidopsis Sequence Match ( AT4G37250.1 )
(BLAST)

001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN
101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP
201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI
301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR
401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG
501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER
601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH
701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Source:UniProtKB/Swiss-Prot;Acc:C0LGS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.