Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 9
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
VIT_12s0057g00690.t01 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT2G15300.1 | VIT_12s0057g00690.t01 | AT5G35750.1 | 18642946 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d008868_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 6.48 | 70.0 |
KRH33257 | Soybean | cytosol, golgi, plasma membrane | 25.0 | 61.97 |
Zm00001d045902_P001 | Maize | cytosol | 8.99 | 60.71 |
PGSC0003DMT400066225 | Potato | plasma membrane | 58.99 | 57.85 |
Solyc01g107650.2.1 | Tomato | plasma membrane | 58.86 | 57.72 |
GSMUA_Achr4P12930_001 | Banana | plasma membrane, vacuole | 43.12 | 56.6 |
KRG91028 | Soybean | plasma membrane | 57.8 | 56.39 |
VIT_07s0129g01070.t01 | Wine grape | plasma membrane | 57.41 | 55.57 |
KRH35733 | Soybean | plasma membrane | 57.14 | 55.38 |
GSMUA_Achr9P22590_001 | Banana | plasma membrane | 47.62 | 54.55 |
GSMUA_Achr8P25210_001 | Banana | plasma membrane | 49.21 | 54.39 |
GSMUA_Achr3P28250_001 | Banana | mitochondrion | 41.01 | 53.36 |
CDX69035 | Canola | plasma membrane | 51.19 | 51.81 |
AT2G15300.1 | Thale cress | plasma membrane | 50.93 | 51.75 |
CDX75411 | Canola | plasma membrane | 50.79 | 51.47 |
Bra011508.1-P | Field mustard | plasma membrane | 50.79 | 51.47 |
Bra039836.1-P | Field mustard | plasma membrane | 48.41 | 51.05 |
CDY52422 | Canola | plasma membrane | 48.28 | 50.69 |
CDY54466 | Canola | plasma membrane | 47.88 | 50.42 |
AT4G34220.1 | Thale cress | plasma membrane | 50.26 | 50.2 |
GSMUA_Achr4P09420_001 | Banana | plasma membrane | 42.99 | 47.58 |
CDY69287 | Canola | mitochondrion | 20.24 | 43.97 |
Os09t0110100-01 | Rice | plasma membrane | 45.9 | 43.7 |
TraesCS5D01G165400.1 | Wheat | plasma membrane | 45.63 | 42.49 |
TraesCS5A01G160500.1 | Wheat | plasma membrane | 45.5 | 42.26 |
TraesCS5B01G158000.1 | Wheat | plasma membrane | 45.37 | 42.24 |
Zm00001d005298_P001 | Maize | mitochondrion, plasma membrane | 45.9 | 41.86 |
EER98554 | Sorghum | plasma membrane | 46.56 | 41.71 |
Zm00001d019701_P001 | Maize | plasma membrane | 45.5 | 41.65 |
EER90087 | Sorghum | plasma membrane | 47.49 | 41.41 |
Zm00001d046626_P001 | Maize | plasma membrane | 44.97 | 40.33 |
Os06t0638500-00 | Rice | plasma membrane | 46.43 | 40.07 |
TraesCS7A01G523900.1 | Wheat | plasma membrane | 45.37 | 39.38 |
TraesCS7D01G512900.1 | Wheat | plasma membrane | 44.97 | 39.08 |
HORVU7Hr1G116470.2 | Barley | plasma membrane | 45.11 | 38.97 |
TraesCS7B01G441200.1 | Wheat | plasma membrane | 44.84 | 38.61 |
VIT_01s0011g04060.t01 | Wine grape | plasma membrane | 35.58 | 37.73 |
VIT_01s0010g02910.t01 | Wine grape | plasma membrane | 34.13 | 36.39 |
VIT_08s0007g07820.t01 | Wine grape | plasma membrane | 28.57 | 33.75 |
Protein Annotations
Gene3D:1.10.510.10 | EntrezGene:100260676 | wikigene:100260676 | EntrezGene:104877300 | MapMan:18.4.1.3 | Gene3D:3.30.200.20 |
Gene3D:3.80.10.10 | ProteinID:CCB62351 | ProteinID:CCB62351.1 | UniProt:F6I5Y3 | EMBL:FN596754 | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | EntrezGene:LOC100260676 | wikigene:LOC100260676 | InterPro:LRR_N_plant-typ |
InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PFAM:PF00069 | PFAM:PF08263 | PFAM:PF13855 | PFscan:PS50011 |
PANTHER:PTHR27008 | PANTHER:PTHR27008:SF35 | InterPro:Prot_kinase_dom | SUPFAM:SSF52058 | SUPFAM:SSF56112 | TMHMM:TMhelix |
UniParc:UPI00015C90BA | ArrayExpress:VIT_03s0180g00150 | EnsemblPlantsGene:VIT_03s0180g00150 | EnsemblPlants:VIT_03s0180g00150.t01 | unigene:Vvi.25858 | RefSeq:XP_002282529 |
RefSeq:XP_002282529.1 | RefSeq:XP_010647897.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3:-:6078670..6081676
Molecular Weight (calculated)
82471.2 Da
IEP (calculated)
5.933
GRAVY (calculated)
-0.220
Length
756 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFNGDYLCS WWRITAFAFA FAFLLLVRCS ALNSDGGLLL SLKYSILSDP LFVLDNWNYN DQTPCSWTGV TCTEIGAPGT PDMFRVTGLV LSNCQLLGSI
101: PEDLCTIEHL QRLDLSNNFF NGSLPTSLFK ASELRVLSLA NNVISGELPE FIGGMKSLQL LNLSDNALAG TVSKSLTALE NLTVVSLRSN YFSGAVPGGF
201: NLVQVLDLSS NLFNGSLPID FGGESLSYFN LSYNKISGTI PSQFAEKIPG NATIDLSSND LTGQIPETAA LIYQKPASFE GNLDLCGNPL KKLCTVPSTQ
301: ATPPNVTTTT SPPAIAAIPR TTDSSPVTSS PQTQQESGMN PGTVAGIAVG DLAGIAILAM IFIYVYQLKK RKKLNDNEKT DSLNKPIPEK KETTQAWSCL
401: TKPKNGEEEE TETETETGSE GHRDDGNKKE MMKNGEGSVV TVDGETQLEL ETLLKASAYI LGTTGASIVY KAVLEDGTAL AVRRIGESRV EKFKDFENQV
501: RLIAKLRHPN LVRVRGFYWG SDEKLIIYDY VSNGSLASTG HRKMGSSPIH MPLELRFRIA KGVARGLAYI HEKKHVHGNL KPSNILLTPE MEPIIADFGL
601: DRFLSGDYTH KDDASGGHFS RQRSTTFHDH PQDYPTAGTS AGILSPYHPP EWLGTLKPNP RWDVYSFGIV LLELLTGRVF LDRELGQLKA GGSGMEERDR
701: VLRMADVGIR GDVEGREDAT LACFKLGFNC ASSVPQKRPT MKEALQILEK NSPTSH
101: PEDLCTIEHL QRLDLSNNFF NGSLPTSLFK ASELRVLSLA NNVISGELPE FIGGMKSLQL LNLSDNALAG TVSKSLTALE NLTVVSLRSN YFSGAVPGGF
201: NLVQVLDLSS NLFNGSLPID FGGESLSYFN LSYNKISGTI PSQFAEKIPG NATIDLSSND LTGQIPETAA LIYQKPASFE GNLDLCGNPL KKLCTVPSTQ
301: ATPPNVTTTT SPPAIAAIPR TTDSSPVTSS PQTQQESGMN PGTVAGIAVG DLAGIAILAM IFIYVYQLKK RKKLNDNEKT DSLNKPIPEK KETTQAWSCL
401: TKPKNGEEEE TETETETGSE GHRDDGNKKE MMKNGEGSVV TVDGETQLEL ETLLKASAYI LGTTGASIVY KAVLEDGTAL AVRRIGESRV EKFKDFENQV
501: RLIAKLRHPN LVRVRGFYWG SDEKLIIYDY VSNGSLASTG HRKMGSSPIH MPLELRFRIA KGVARGLAYI HEKKHVHGNL KPSNILLTPE MEPIIADFGL
601: DRFLSGDYTH KDDASGGHFS RQRSTTFHDH PQDYPTAGTS AGILSPYHPP EWLGTLKPNP RWDVYSFGIV LLELLTGRVF LDRELGQLKA GGSGMEERDR
701: VLRMADVGIR GDVEGREDAT LACFKLGFNC ASSVPQKRPT MKEALQILEK NSPTSH
001: MTSNRSNLLF SLVLFHFLFV PTQLQALNTD GVLLLTFKYS ILTDPLSVLR NWNYDDATPC LWTGVTCTEL GKPNTPDMFR VTSLVLPNKH LLGSITPDLF
101: SIPYLRILDL SSNFFNGSLP DSVFNATELQ SISLGSNNLS GDLPKSVNSV TNLQLLNLSA NAFTGEIPLN ISLLKNLTVV SLSKNTFSGD IPSGFEAAQI
201: LDLSSNLLNG SLPKDLGGKS LHYLNLSHNK VLGEISPNFA EKFPANATVD LSFNNLTGPI PSSLSLLNQK AESFSGNQEL CGKPLKILCS IPSTLSNPPN
301: ISETTSPAIA VKPRSTAPIN PLTEKPNQTG KSKLKPSTIA AITVADIVGL AFIGLLVLYV YQVRKRRRYP ESSKFSFFKF CLEKNEAKKS KPSTTEVTVP
401: ESPEAKTTCG SCIILTGGRY DETSTSESDV ENQQTVQAFT RTDGGQLKQS SQTQLVTVDG ETRLDLDTLL KASAYILGTT GTGIVYKAVL ENGTAFAVRR
501: IETESCAAAK PKEFEREVRA IAKLRHPNLV RIRGFCWGDD EKLLISDYVP NGSLLCFFTA TKASSSSSSS SSLQNPLTFE ARLKIARGMA RGLSYINEKK
601: QVHGNIKPNN ILLNAENEPI ITDLGLDRLM TPARESHTTG PTSSSPYQPP EWSTSLKPNP KWDVYSFGVI LLELLTSKVF SVDHDIDQFS NLSDSAAEEN
701: GRFLRLIDGA IRSDVARHED AAMACFRLGI ECVSSLPQKR PSMKELVQVL EKICVLV
101: SIPYLRILDL SSNFFNGSLP DSVFNATELQ SISLGSNNLS GDLPKSVNSV TNLQLLNLSA NAFTGEIPLN ISLLKNLTVV SLSKNTFSGD IPSGFEAAQI
201: LDLSSNLLNG SLPKDLGGKS LHYLNLSHNK VLGEISPNFA EKFPANATVD LSFNNLTGPI PSSLSLLNQK AESFSGNQEL CGKPLKILCS IPSTLSNPPN
301: ISETTSPAIA VKPRSTAPIN PLTEKPNQTG KSKLKPSTIA AITVADIVGL AFIGLLVLYV YQVRKRRRYP ESSKFSFFKF CLEKNEAKKS KPSTTEVTVP
401: ESPEAKTTCG SCIILTGGRY DETSTSESDV ENQQTVQAFT RTDGGQLKQS SQTQLVTVDG ETRLDLDTLL KASAYILGTT GTGIVYKAVL ENGTAFAVRR
501: IETESCAAAK PKEFEREVRA IAKLRHPNLV RIRGFCWGDD EKLLISDYVP NGSLLCFFTA TKASSSSSSS SSLQNPLTFE ARLKIARGMA RGLSYINEKK
601: QVHGNIKPNN ILLNAENEPI ITDLGLDRLM TPARESHTTG PTSSSPYQPP EWSTSLKPNP KWDVYSFGVI LLELLTSKVF SVDHDIDQFS NLSDSAAEEN
701: GRFLRLIDGA IRSDVARHED AAMACFRLGI ECVSSLPQKR PSMKELVQVL EKICVLV
Arabidopsis Description
Receptor protein kinase-like protein At4g34220 [Source:UniProtKB/Swiss-Prot;Acc:Q94C77]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.