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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 9
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • golgi 4
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_12s0057g00690.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G15300.1 VIT_12s0057g00690.t01 AT5G35750.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d008868_P001 Maize endoplasmic reticulum, extracellular, plastid 6.48 70.0
KRH33257 Soybean cytosol, golgi, plasma membrane 25.0 61.97
Zm00001d045902_P001 Maize cytosol 8.99 60.71
PGSC0003DMT400066225 Potato plasma membrane 58.99 57.85
Solyc01g107650.2.1 Tomato plasma membrane 58.86 57.72
GSMUA_Achr4P12930_001 Banana plasma membrane, vacuole 43.12 56.6
KRG91028 Soybean plasma membrane 57.8 56.39
VIT_07s0129g01070.t01 Wine grape plasma membrane 57.41 55.57
KRH35733 Soybean plasma membrane 57.14 55.38
GSMUA_Achr9P22590_001 Banana plasma membrane 47.62 54.55
GSMUA_Achr8P25210_001 Banana plasma membrane 49.21 54.39
GSMUA_Achr3P28250_001 Banana mitochondrion 41.01 53.36
CDX69035 Canola plasma membrane 51.19 51.81
AT2G15300.1 Thale cress plasma membrane 50.93 51.75
CDX75411 Canola plasma membrane 50.79 51.47
Bra011508.1-P Field mustard plasma membrane 50.79 51.47
Bra039836.1-P Field mustard plasma membrane 48.41 51.05
CDY52422 Canola plasma membrane 48.28 50.69
CDY54466 Canola plasma membrane 47.88 50.42
AT4G34220.1 Thale cress plasma membrane 50.26 50.2
GSMUA_Achr4P09420_001 Banana plasma membrane 42.99 47.58
CDY69287 Canola mitochondrion 20.24 43.97
Os09t0110100-01 Rice plasma membrane 45.9 43.7
TraesCS5D01G165400.1 Wheat plasma membrane 45.63 42.49
TraesCS5A01G160500.1 Wheat plasma membrane 45.5 42.26
TraesCS5B01G158000.1 Wheat plasma membrane 45.37 42.24
Zm00001d005298_P001 Maize mitochondrion, plasma membrane 45.9 41.86
EER98554 Sorghum plasma membrane 46.56 41.71
Zm00001d019701_P001 Maize plasma membrane 45.5 41.65
EER90087 Sorghum plasma membrane 47.49 41.41
Zm00001d046626_P001 Maize plasma membrane 44.97 40.33
Os06t0638500-00 Rice plasma membrane 46.43 40.07
TraesCS7A01G523900.1 Wheat plasma membrane 45.37 39.38
TraesCS7D01G512900.1 Wheat plasma membrane 44.97 39.08
HORVU7Hr1G116470.2 Barley plasma membrane 45.11 38.97
TraesCS7B01G441200.1 Wheat plasma membrane 44.84 38.61
VIT_01s0011g04060.t01 Wine grape plasma membrane 35.58 37.73
VIT_01s0010g02910.t01 Wine grape plasma membrane 34.13 36.39
VIT_08s0007g07820.t01 Wine grape plasma membrane 28.57 33.75
Protein Annotations
Gene3D:1.10.510.10EntrezGene:100260676wikigene:100260676EntrezGene:104877300MapMan:18.4.1.3Gene3D:3.30.200.20
Gene3D:3.80.10.10ProteinID:CCB62351ProteinID:CCB62351.1UniProt:F6I5Y3EMBL:FN596754GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfEntrezGene:LOC100260676wikigene:LOC100260676InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069PFAM:PF08263PFAM:PF13855PFscan:PS50011
PANTHER:PTHR27008PANTHER:PTHR27008:SF35InterPro:Prot_kinase_domSUPFAM:SSF52058SUPFAM:SSF56112TMHMM:TMhelix
UniParc:UPI00015C90BAArrayExpress:VIT_03s0180g00150EnsemblPlantsGene:VIT_03s0180g00150EnsemblPlants:VIT_03s0180g00150.t01unigene:Vvi.25858RefSeq:XP_002282529
RefSeq:XP_002282529.1RefSeq:XP_010647897.1SEG:seg:::
Description
No Description!
Coordinates
chr3:-:6078670..6081676
Molecular Weight (calculated)
82471.2 Da
IEP (calculated)
5.933
GRAVY (calculated)
-0.220
Length
756 amino acids
Sequence
(BLAST)
001: MSFNGDYLCS WWRITAFAFA FAFLLLVRCS ALNSDGGLLL SLKYSILSDP LFVLDNWNYN DQTPCSWTGV TCTEIGAPGT PDMFRVTGLV LSNCQLLGSI
101: PEDLCTIEHL QRLDLSNNFF NGSLPTSLFK ASELRVLSLA NNVISGELPE FIGGMKSLQL LNLSDNALAG TVSKSLTALE NLTVVSLRSN YFSGAVPGGF
201: NLVQVLDLSS NLFNGSLPID FGGESLSYFN LSYNKISGTI PSQFAEKIPG NATIDLSSND LTGQIPETAA LIYQKPASFE GNLDLCGNPL KKLCTVPSTQ
301: ATPPNVTTTT SPPAIAAIPR TTDSSPVTSS PQTQQESGMN PGTVAGIAVG DLAGIAILAM IFIYVYQLKK RKKLNDNEKT DSLNKPIPEK KETTQAWSCL
401: TKPKNGEEEE TETETETGSE GHRDDGNKKE MMKNGEGSVV TVDGETQLEL ETLLKASAYI LGTTGASIVY KAVLEDGTAL AVRRIGESRV EKFKDFENQV
501: RLIAKLRHPN LVRVRGFYWG SDEKLIIYDY VSNGSLASTG HRKMGSSPIH MPLELRFRIA KGVARGLAYI HEKKHVHGNL KPSNILLTPE MEPIIADFGL
601: DRFLSGDYTH KDDASGGHFS RQRSTTFHDH PQDYPTAGTS AGILSPYHPP EWLGTLKPNP RWDVYSFGIV LLELLTGRVF LDRELGQLKA GGSGMEERDR
701: VLRMADVGIR GDVEGREDAT LACFKLGFNC ASSVPQKRPT MKEALQILEK NSPTSH
Best Arabidopsis Sequence Match ( AT4G34220.1 )
(BLAST)
001: MTSNRSNLLF SLVLFHFLFV PTQLQALNTD GVLLLTFKYS ILTDPLSVLR NWNYDDATPC LWTGVTCTEL GKPNTPDMFR VTSLVLPNKH LLGSITPDLF
101: SIPYLRILDL SSNFFNGSLP DSVFNATELQ SISLGSNNLS GDLPKSVNSV TNLQLLNLSA NAFTGEIPLN ISLLKNLTVV SLSKNTFSGD IPSGFEAAQI
201: LDLSSNLLNG SLPKDLGGKS LHYLNLSHNK VLGEISPNFA EKFPANATVD LSFNNLTGPI PSSLSLLNQK AESFSGNQEL CGKPLKILCS IPSTLSNPPN
301: ISETTSPAIA VKPRSTAPIN PLTEKPNQTG KSKLKPSTIA AITVADIVGL AFIGLLVLYV YQVRKRRRYP ESSKFSFFKF CLEKNEAKKS KPSTTEVTVP
401: ESPEAKTTCG SCIILTGGRY DETSTSESDV ENQQTVQAFT RTDGGQLKQS SQTQLVTVDG ETRLDLDTLL KASAYILGTT GTGIVYKAVL ENGTAFAVRR
501: IETESCAAAK PKEFEREVRA IAKLRHPNLV RIRGFCWGDD EKLLISDYVP NGSLLCFFTA TKASSSSSSS SSLQNPLTFE ARLKIARGMA RGLSYINEKK
601: QVHGNIKPNN ILLNAENEPI ITDLGLDRLM TPARESHTTG PTSSSPYQPP EWSTSLKPNP KWDVYSFGVI LLELLTSKVF SVDHDIDQFS NLSDSAAEEN
701: GRFLRLIDGA IRSDVARHED AAMACFRLGI ECVSSLPQKR PSMKELVQVL EKICVLV
Arabidopsis Description
Receptor protein kinase-like protein At4g34220 [Source:UniProtKB/Swiss-Prot;Acc:Q94C77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.