Factsheet for VIT_12s0057g00690.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 4
nucleus 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0207g00090.t01
VIT_00s0333g00020.t01
VIT_01s0010g00600.t01
VIT_01s0010g03780.t01
VIT_01s0146g00110.t01
VIT_02s0025g01170.t01
VIT_02s0033g01360.t01
VIT_03s0180g00150.t01
VIT_04s0008g03460.t01
VIT_04s0044g01210.t01
VIT_05s0020g02210.t01
VIT_05s0020g03390.t01
VIT_07s0005g05160.t01
VIT_07s0031g02610.t01
VIT_07s0104g00880.t01
VIT_08s0007g03770.t01
VIT_08s0007g04000.t01
VIT_08s0058g00200.t01
VIT_09s0002g00390.t01
VIT_09s0002g01620.t01
VIT_12s0028g03130.t01
VIT_12s0034g00930.t01
VIT_12s0057g00690.t01
VIT_13s0067g03800.t01
VIT_13s0067g03810.t01
VIT_13s0084g00240.t01
VIT_13s0084g00250.t01
VIT_16s0098g00730.t01
VIT_17s0000g03690.t01
VIT_17s0000g05680.t01
VIT_18s0001g11630.t01
VIT_19s0014g02200.t01
VIT_19s0140g00210.t01
VIT_19s0177g00100.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G35750.1	VIT_19s0140g00210.t01	AT1G17100.1	18642946
AT5G35750.1	VIT_13s0067g03800.t01	AT1G22450.1	18642946
AT5G35750.1	VIT_13s0067g03810.t01	AT1G22450.1	18642946
AT5G35750.1	VIT_01s0010g00600.t01	AT1G26270.1	18642946
AT5G35750.1	VIT_01s0010g03780.t01	AT1G27320.1	16965536
AT5G35750.1	VIT_04s0008g03460.t01	AT1G27320.1	16965536
AT5G35750.1	VIT_02s0033g01360.t01	AT1G31810.1	18642946
AT5G35750.1	VIT_09s0002g01620.t01	AT1G33120.1	18642946
AT5G35750.1	VIT_16s0098g00730.t01	AT1G33120.1	18642946
AT5G35750.1	VIT_09s0002g01620.t01	AT1G33140.1	18642946
AT5G35750.1	VIT_16s0098g00730.t01	AT1G33140.1	18642946
AT5G35750.1	VIT_09s0002g00390.t01	AT1G53880.1	18642946
AT5G35750.1	VIT_02s0025g01170.t01	AT1G64330.1	18642946
AT5G35750.1	VIT_00s0207g00090.t01	AT1G65430.1	18642946
AT5G35750.1	VIT_17s0000g03690.t01	AT1G67090.1	18642946
AT5G35750.1	VIT_03s0180g00150.t01	AT2G15300.1	18642946
AT5G35750.1	VIT_12s0028g03130.t01	AT2G20580.1	18642946
AT5G35750.1	VIT_08s0007g04000.t01	AT3G10020.1	18642946
AT5G35750.1	VIT_08s0058g00200.t01	AT3G11100.1	18642946
AT5G35750.1	VIT_05s0020g02210.t01	AT3G21510.1	16965536
AT5G35750.1	VIT_07s0104g00880.t01	AT3G29350.1	16965536
AT5G35750.1	VIT_07s0104g00880.t01	AT3G29350.1	18642946
AT5G35750.1	VIT_08s0007g03770.t01	AT3G52920.1	18642946
AT5G35750.1	VIT_19s0177g00100.t01	AT4G27130.1	18642946
AT5G35750.1	VIT_07s0005g05160.t01	AT4G29040.1	18642946
AT5G35750.1	VIT_13s0084g00240.t01	AT5G07010.1	18642946
AT5G35750.1	VIT_13s0084g00250.t01	AT5G07010.1	18642946
AT5G35750.1	VIT_07s0031g02610.t01	AT5G08790.1	18642946
AT5G35750.1	VIT_01s0146g00110.t01	AT5G13120.1	18642946
AT5G35750.1	VIT_12s0057g00690.t01	AT5G35750.1	16965536
AT5G35750.1	VIT_18s0001g11630.t01	AT5G42650.1	18642946
AT5G35750.1	VIT_00s0333g00020.t01	AT5G48470.1	18642946
AT5G35750.1	VIT_19s0014g02200.t01	AT5G53950.1	18642946
AT5G35750.1	VIT_05s0020g03390.t01	AT5G62740.1	18642946
AT5G35750.1	VIT_12s0034g00930.t01	AT5G62740.1	18642946
AT5G35750.1	VIT_17s0000g05680.t01	AT5G62740.1	18642946
AT5G35750.1	VIT_04s0044g01210.t01	AT5G64070.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P17470_001	Banana	cytosol	42.14	69.16
PGSC0003DMT400015729	Potato	cytosol	19.89	68.75
Solyc07g047770.2.1	Tomato	golgi	66.51	68.5
KRH14106	Soybean	mitochondrion	64.94	67.43
KRH74010	Soybean	mitochondrion, plasma membrane	64.62	67.32
GSMUA_AchrUn_...	Banana	cytosol	49.14	65.65
Bra035381.1-P	Field mustard	cytosol, golgi, plasma membrane	58.33	64.58
CDX74635	Canola	cytosol, golgi, plasma membrane	58.33	64.58
CDY47297	Canola	plasma membrane	58.02	64.23
AT5G35750.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	58.88	63.69
Bra013186.1-P	Field mustard	plasma membrane	54.64	63.35
CDX93074	Canola	plasma membrane	54.56	63.26
CDY50037	Canola	endoplasmic reticulum, golgi, plasma membrane	54.4	62.97
Zm00001d014297_P006	Maize	cytosol	46.3	62.59
VIT_01s0010g03780.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	48.35	59.19
GSMUA_Achr1P22740_001	Banana	cytosol	36.87	57.62
Os10t0362300-03	Rice	extracellular	51.1	54.76
VIT_01s0011g06190.t01	Wine grape	mitochondrion	44.97	54.53
VIT_04s0008g03460.t01	Wine grape	plastid	12.66	47.92
VIT_19s0093g00580.t01	Wine grape	cytosol	13.13	22.54
VIT_07s0005g00850.t01	Wine grape	cytosol	11.08	22.17
VIT_04s0069g00750.t01	Wine grape	nucleus	14.23	21.39
VIT_14s0081g00630.t01	Wine grape	plasma membrane	12.58	21.05
VIT_05s0049g00090.t01	Wine grape	plasma membrane	11.87	19.76
VIT_04s0023g03680.t01	Wine grape	mitochondrion	16.9	17.41
VIT_07s0005g01380.t01	Wine grape	plasma membrane	13.6	15.81
VIT_06s0004g05240.t01	Wine grape	endoplasmic reticulum, plasma membrane	5.74	13.25

Protein Annotations

Gene3D:1.10.287.130	EntrezGene:100263145	wikigene:100263145	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300
ProteinID:ACO88936	ProteinID:ACO88936.1	ProteinID:CCB51723	ProteinID:CCB51723.1	InterPro:CHASE_dom	EntrezGene:CYT1
wikigene:CYT1	InterPro:CheY-like_superfamily	UniProt:F6HHM7	EMBL:FJ822975	EMBL:FN595759	GO:GO:0000155
GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016772	GO:GO:0018106	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467
InterPro:IPR006189	InterPro:IPR036890	PFAM:PF00072	PFAM:PF00512	PFAM:PF02518	PFAM:PF03924
PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PFscan:PS50839	PANTHER:PTHR43719	PANTHER:PTHR43719:SF16
SMART:SM00387	SMART:SM00388	SMART:SM00448	SMART:SM01079	SUPFAM:SSF47384	SUPFAM:SSF52172
SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	SignalP:SignalP-noTM	TIGR:TC71089	TMHMM:TMhelix
UniParc:UPI0002108D9E	ArrayExpress:VIT_12s0057g00690	EnsemblPlantsGene:VIT_12s0057g00690	EnsemblPlants:VIT_12s0057g00690.t01	unigene:Vvi.18921	unigene:Vvi.25973
RefSeq:XP_002269977	RefSeq:XP_002269977.2	RefSeq:XP_003633329	RefSeq:XP_003633329.1	RefSeq:XP_010657450.1	RefSeq:XP_010657451.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr12:+:9317445..9326297

Molecular Weight (calculated)

141685.0 Da

IEP (calculated)

7.583

GRAVY (calculated)

-0.181

Length

1272 amino acids

Sequence
(BLAST)

0001: MSFSAVAGVF LKLSRLILKI CRWVLLKMSL NCKLSGFSGR LPANLKLKKS KEPLHGSNCV RKWRRKFLLL WLLGVIIGLI CFLSVLNAGA LSRKEKTPDL
0101: CEEKARILLE HFNVSKNQLH SLASLFAESD QIASLECTKE AGFEMPPGNA IACALKVPCS QNQEFEKQHD QAAESLEPND QCPVRDENIP GKLDLSLLGD
0201: QSASFSSQST SSSVSLDGQS GEKIRALANC TKEHCENFSL CLVKVGWWVL VGMVVSCKLS GSHVKLWGNR KQKLVEQQKL VEQQSQVQQQ RQLRPKQQQP
0301: AQSSSKVAGK WRKKLLIIFV LLGVIISIWL FWHLNKDINL RRRETLTNMC DERARMLQDQ FNVSMNHVHA LAILVSTFHH GKHPSAIDQK TFGEYTERTA
0401: FERPLTSGVA YALKVLHSER EHFEKEHGWT IKKMETEDQT LVQDCILENL DPSPIQDEYA PVIFSQETVS HIVSIDMMSG KEDRENILRA RASGKGVLTS
0501: PFKLLKSNHL GVVLTFAVYN ADLPPDATPE QRIEATVGYL GASYDVPSLV KKLLHQLASK QTIVVNVYDT TNASAPINMY GTNVTDTGLL RISNLDFGDP
0601: ARKHEMHCRF KQKPPPPWTA ITASVGVLVI TLLVGHIFHA AINRIAKVEG DYRQMMELKV RAEAADVAKS QFLATVSHEI RTPMNGVLGM LKMLMDSGLD
0701: ANQQDYAETA HASGKDLISL INEVLDQAKI ESGRLELEAV PFDLRAALDN VLSLFSGKSH EKGIELAVYI SDQVPEFVIG DPGRFRQIIT NLVGNSIKFT
0801: HDKGHIFVSV HLADEVVGPP DLRDEVLRQS LNIVHDSSNN SYNTLSGFPV VNRWKSWEKF KKLSCTDSME ETSIIKLLVT VEDTGVGIPS EAQSRIFMPF
0901: MQADSSTSRT YGGTGIGLSI SKRLVDLMGG EIGFESEPGT GSTFSFTVAF TKGETSLLDT KQQPHDPAGS EFQELRALVV DCRSIRAEVT RYHLQRLGIS
1001: VDKTFSLISA CSYLSNNSDP SASTSVAMVL VDKEVWDKEA GLVFHHMLKE LRPNGTVEVQ EKRPKIFLLD TSLSSAERNE LKSAGFVDNV LMKPLRLSVL
1101: ISCFQEVFGI GKRKQANRGK PLTLGNLLRE KRILVVDDNA VNRRVAEFAL KKYGAIVTCV DSGKAALLML KPPHNFDACF MDLQMPEMDG FRATQEIRRM
1201: ESKVNERIKS GEVSIEMFAN VAYWHTPILA MTADVIQANN EECMKCGMDG YVAKPFEEDQ LYSAVAHFFE SG

Best Arabidopsis Sequence Match ( AT5G35750.1 )
(BLAST)

0001: MSITCELLNL TSKKAKKSSS SDKKWLKKPL FFLILCGSLV IVLVMFLRLG RSQKEETDSC NGEEKVLYRH QNVTRSEIHD LVSLFSDSDQ VTSFECHKES
0101: SPGMWTNYGI TCSLSVRSDK QETRGLPWNL GLGHSISSTS CMCGNLEPIL QQPENLEEEN HEEGLEQGLS SYLRNAWWCL ILGVLVCHKI YVSHSKARGE
0201: RKEKVHLQEA LAPKKQQQRA QTSSRGAGRW RKNILLLGIL GGVSFSVWWF WDTNEEIIMK RRETLANMCD ERARVLQDQF NVSLNHVHAL SILVSTFHHG
0301: KIPSAIDQRT FEEYTERTNF ERPLTSGVAY ALKVPHSERE KFEKEHGWAI KKMETEDQTV VQDCVPENFD PAPIQDEYAP VIFAQETVSH IVSVDMMSGE
0401: EDRENILRAR ASGKGVLTSP FKLLKSNHLG VVLTFAVYDT SLPPDATEEQ RVEATIGYLG ASYDMPSLVE KLLHQLASKQ TIAVDVYDTT NTSGLIKMYG
0501: SEIGDISEQH ISSLDFGDPS RNHEMHCRFK HKLPIPWTAI TPSILVLVIT FLVGYILYEA INRIATVEED CQKMRELKAR AEAADIAKSQ FLATVSHEIR
0601: TPMNGVLGML KMLMDTDLDA KQMDYAQTAH GSGKDLTSLI NEVLDQAKIE SGRLELENVP FDMRFILDNV SSLLSGKANE KGIELAVYVS SQVPDVVVGD
0701: PSRFRQIITN LVGNSIKFTQ ERGHIFISVH LADEVKEPLT IEDAVLKQRL ALGCSESGET VSGFPAVNAW GSWKNFKTCY STESQNSDQI KLLVTVEDTG
0801: VGIPVDAQGR IFTPFMQADS STSRTYGGTG IGLSISKRLV ELMQGEMGFV SEPGIGSTFS FTGVFGKAET NTSITKLERF DLAIQEFTGL RALVIDNRNI
0901: RAEVTRYELR RLGISADIVS SLRMACTCCI SKLENLAMIL IDKDAWNKEE FSVLDELFTR SKVTFTRVPK IFLLATSATL TERSEMKSTG LIDEVVIKPL
1001: RMSVLICCLQ ETLVNGKKRQ PNRQRRNLGH LLREKQILVV DDNLVNRRVA EGALKKYGAI VTCVESGKAA LAMLKPPHNF DACFMDLQMP EMDGFEATRR
1101: VRELEREINK KIASGEVSAE MFCKFSSWHV PILAMTADVI QATHEECMKC GMDGYVSKPF EEEVLYTAVA RFFEPC

Arabidopsis Description

AHK2Histidine kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U2]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.