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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • golgi 1
  • mitochondrion 3
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:mitochondrion
 extracellular: 25047395
msms PMID: 25047395 doi
JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0210500-01
Os01t0311600-01
Os01t0681100-01
Os01t0794500-00
Os01t0884300-01
Os01t0923700-04
Os02t0146700-02
Os02t0218700-01
Os02t0218800-01
Os02t0528100-01
Os02t0684100-00
Os03t0298400-01
Os03t0390400-01
Os03t0767000-01
Os04t0359300-00
Os04t0408600-01
Os04t0526300-00
Os04t0668700-01
Os05t0103200-01
Os05t0498400-02
Os05t0556100-01
Os05t0591900-05
Os06t0344900-00
Os06t0626600-01
Os06t0638500-00
Os06t0699900-01
Os07t0148600-00
Os07t0605800-01
Os07t0606400-00
Os07t0691800-01
Os08t0240000-02
Os08t0277300-00
Os08t0297800-01
Os08t0515000-00
Os09t0110100-01
Os09t0256100-00
Os09t0326800-01
Os09t0485900-01
Os09t0555150-01
Os10t0119300-01
Os10t0190100-01
Os10t0362300-03
Os11t0141100-00
Os11t0141333-00
Os11t0149200-00
Os11t0184900-02
Os11t0209700-02
Os11t0425300-01
Os11t0450400-01
Os11t0503900-01
Os11t0505300-01
Os12t0137600-00
Os12t0137700-01
Os12t0147200-01
Os12t0270900-02
Os12t0274700-01
Os12t0291100-01
Os12t0291200-00
Os12t0291400-01
Os12t0292400-01
Os12t0497400-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G35750.1 Os01t0210500-01 AT1G17100.1 18642946
AT5G35750.1 Os03t0390400-01 AT1G22450.1 18642946
AT5G35750.1 Os04t0668700-01 AT1G26270.1 18642946
AT5G35750.1 Os01t0923700-04 AT1G27320.1 16965536
AT5G35750.1 Os10t0119300-01 AT1G31810.1 18642946
AT5G35750.1 Os09t0485900-01 AT1G33120.1 18642946
AT5G35750.1 Os09t0485900-01 AT1G33140.1 18642946
AT5G35750.1 Os12t0497400-01 AT1G53880.1 18642946
AT5G35750.1 Os12t0274700-01 AT1G67090.1 18642946
AT5G35750.1 Os12t0291100-01 AT1G67090.1 18642946
AT5G35750.1 Os12t0291200-00 AT1G67090.1 18642946
AT5G35750.1 Os12t0291400-01 AT1G67090.1 18642946
AT5G35750.1 Os12t0292400-01 AT1G67090.1 18642946
AT5G35750.1 Os06t0638500-00 AT2G15300.1 18642946
AT5G35750.1 Os09t0110100-01 AT2G15300.1 18642946
AT5G35750.1 Os02t0146700-02 AT2G20580.1 18642946
AT5G35750.1 Os06t0699900-01 AT2G20580.1 18642946
AT5G35750.1 Os09t0326800-01 AT2G20580.1 18642946
AT5G35750.1 Os11t0149200-00 AT3G10020.1 18642946
AT5G35750.1 Os12t0147200-01 AT3G10020.1 18642946
AT5G35750.1 Os02t0528100-01 AT3G52920.1 18642946
AT5G35750.1 Os04t0408600-01 AT3G52920.1 18642946
AT5G35750.1 Os01t0794500-00 AT4G27130.1 18642946
AT5G35750.1 Os05t0498400-02 AT4G27130.1 18642946
AT5G35750.1 Os03t0298400-01 AT4G29040.1 18642946
AT5G35750.1 Os07t0691800-01 AT4G29040.1 18642946
AT5G35750.1 Os01t0311600-01 AT5G07010.1 18642946
AT5G35750.1 Os02t0684100-00 AT5G07010.1 18642946
AT5G35750.1 Os04t0359300-00 AT5G07010.1 18642946
AT5G35750.1 Os04t0526300-00 AT5G07010.1 18642946
AT5G35750.1 Os06t0626600-01 AT5G07010.1 18642946
AT5G35750.1 Os07t0148600-00 AT5G07010.1 18642946
AT5G35750.1 Os07t0605800-01 AT5G07010.1 18642946
AT5G35750.1 Os07t0606400-00 AT5G07010.1 18642946
AT5G35750.1 Os08t0240000-02 AT5G07010.1 18642946
AT5G35750.1 Os08t0277300-00 AT5G07010.1 18642946
AT5G35750.1 Os08t0297800-01 AT5G07010.1 18642946
AT5G35750.1 Os08t0515000-00 AT5G07010.1 18642946
AT5G35750.1 Os09t0256100-00 AT5G07010.1 18642946
AT5G35750.1 Os09t0555150-01 AT5G07010.1 18642946
AT5G35750.1 Os10t0190100-01 AT5G07010.1 18642946
AT5G35750.1 Os11t0141100-00 AT5G07010.1 18642946
AT5G35750.1 Os11t0141333-00 AT5G07010.1 18642946
AT5G35750.1 Os11t0450400-01 AT5G07010.1 18642946
AT5G35750.1 Os11t0503900-01 AT5G07010.1 18642946
AT5G35750.1 Os11t0505300-01 AT5G07010.1 18642946
AT5G35750.1 Os12t0137600-00 AT5G07010.1 18642946
AT5G35750.1 Os12t0137700-01 AT5G07010.1 18642946
AT5G35750.1 Os12t0270900-02 AT5G07010.1 18642946
AT5G35750.1 Os01t0884300-01 AT5G08790.1 18642946
AT5G35750.1 Os11t0184900-02 AT5G08790.1 18642946
AT5G35750.1 Os05t0103200-01 AT5G13120.1 18642946
AT5G35750.1 Os10t0362300-03 AT5G35750.1 16965536
AT5G35750.1 Os01t0681100-01 AT5G42080.1 18642946
AT5G35750.1 Os05t0556100-01 AT5G42080.1 18642946
AT5G35750.1 Os02t0218700-01 AT5G42650.1 18642946
AT5G35750.1 Os02t0218800-01 AT5G42650.1 18642946
AT5G35750.1 Os03t0767000-01 AT5G42650.1 18642946
AT5G35750.1 Os11t0425300-01 AT5G48470.1 18642946
AT5G35750.1 Os06t0344900-00 AT5G53950.1 18642946
AT5G35750.1 Os05t0591900-05 AT5G62740.1 18642946
AT5G35750.1 Os11t0209700-02 AT5G64070.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014297_P006 Maize cytosol 63.18 79.7
GSMUA_Achr4P17470_001 Banana cytosol 43.64 66.84
GSMUA_AchrUn_... Banana cytosol 52.57 65.55
GSMUA_Achr1P22740_001 Banana cytosol 38.16 55.65
PGSC0003DMT400015729 Potato cytosol 16.68 53.8
Os03t0717700-01 Rice cytosol, mitochondrion, plasma membrane 44.73 52.84
Bra013186.1-P Field mustard plasma membrane 48.44 52.42
CDX93074 Canola plasma membrane 48.36 52.32
CDY50037 Canola endoplasmic reticulum, golgi, plasma membrane 47.94 51.77
VIT_12s0057g00690.t01 Wine grape endoplasmic reticulum, golgi 54.76 51.1
CDY47297 Canola plasma membrane 49.37 51.0
Bra035381.1-P Field mustard cytosol, golgi, plasma membrane 49.37 51.0
CDX74635 Canola cytosol, golgi, plasma membrane 49.37 51.0
AT5G35750.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 50.46 50.94
Os01t0923700-04 Rice endoplasmic reticulum, golgi, peroxisome 43.81 50.83
Solyc07g047770.2.1 Tomato golgi 51.47 49.47
KRH74010 Soybean mitochondrion, plasma membrane 50.38 48.98
Os02t0738400-01 Rice mitochondrion 41.45 48.62
KRH14106 Soybean mitochondrion 50.04 48.49
Os06t0654300-00 Rice cytosol, mitochondrion, plastid 4.3 40.16
Os03t0701700-02 Rice cytosol, plasma membrane, vacuole 11.12 20.75
Os06t0183200-01 Rice endoplasmic reticulum, golgi, plasma membrane 18.11 20.52
Os05t0155200-01 Rice plasma membrane 8.42 19.3
Os04t0169100-02 Rice plasma membrane 10.78 16.78
Os02t0820900-03 Rice mitochondrion 10.95 15.55
Os07t0259100-01 Rice mitochondrion, plasma membrane 9.94 15.19
Protein Annotations
Gene3D:1.10.287.130MapMan:11.4.2.1Gene3D:3.30.450.350Gene3D:3.40.50.2300EntrezGene:4348447UniProt:A1A697
ProteinID:AAM18726.1ProteinID:AAP53311.2EMBL:AB246778EMBL:AP014966ProteinID:BAF26350.2InterPro:CHASE_dom
InterPro:CheY-like_superfamilyncoils:CoilProteinID:EEE50822.1ProteinID:FAA00249.1GO:GO:0000003GO:GO:0000155
GO:GO:0000160GO:GO:0003674GO:GO:0003824GO:GO:0004673GO:GO:0004871GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005886GO:GO:0006464
GO:GO:0006810GO:GO:0006950GO:GO:0006970GO:GO:0007154GO:GO:0007165GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009414GO:GO:0009628GO:GO:0009636
GO:GO:0009651GO:GO:0009719GO:GO:0009736GO:GO:0009737GO:GO:0009791GO:GO:0009908
GO:GO:0009909GO:GO:0009987GO:GO:0010029GO:GO:0010087GO:GO:0010271GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0016772GO:GO:0018106
GO:GO:0019538GO:GO:0019900GO:GO:0023014GO:GO:0034757GO:GO:0038023GO:GO:0040007
GO:GO:0042802GO:GO:0043424GO:GO:0048509GO:GO:0048831GO:GO:0070417GO:GO:0071215
GO:GO:0080117InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:HisK_dim/PInterPro:HisK_dim/P_sfInterPro:His_kinase_dom
InterPro:IPR001789InterPro:IPR005467InterPro:IPR006189InterPro:IPR036890EnsemblPlantsGene:Os10g0362300EnsemblPlants:Os10t0362300-03
PFAM:PF00072PFAM:PF00512PFAM:PF02518PFAM:PF03924PRINTS:PR00344PFscan:PS50109
PFscan:PS50110PFscan:PS50839PFscan:PS51257PANTHER:PTHR43719PANTHER:PTHR43719:SF16SMART:SM00387
SMART:SM00388SMART:SM00448SMART:SM01079SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55874
InterPro:Sig_transdc_His_kin-like_CInterPro:Sig_transdc_resp-reg_receiverTMHMM:TMhelixUniParc:UPI0000DD995BRefSeq:XP_015614148.1SEG:seg
Description
HISTIDINE KINASE 5Similar to Histidine kinase 3. (Os10t0362300-01);Similar to Histidine kinase. (Os10t0362300-02);Histidine kinase, Cytokinin signaling (Os10t0362300-03);Histidine kinase, Cytokinin signaling (Os10t0362300-04)
Coordinates
chr10:-:11193340..11203063
Molecular Weight (calculated)
130517.0 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.134
Length
1187 amino acids
Sequence
(BLAST)
0001: MSRVGECGGG GGCGARRGKA AHAGAGAVAG FLGCLLLVWA MGGCGRGCGG GGGEGVRDRV EEVAAQFNLS MSKLQALASL LSSPERECIC KSGTINDDNP
0101: AHSMPDMSNC RLKNKPSGGN QNRLDNVIIQ DCCANEDNYD KNNHENNLLQ NAMQQDIGSP TTLWNQNNAL SFNHGMIFSL SASLGIVVIL VVITIFKRGK
0201: QANELCQHEK LLQTPSVKIS RKWSKRALLL GVLVGLCSSV WIFSSMHADV VARRIENLEN MCDERARMLQ DQFNVSMNHV HALAILVSTF HHGKNPSAID
0301: QKTFEDFTAR TTFERPLMSG VAYALKVLHS ERELFEQKLG WKIKKMETED QSLVHDYNPE KLQPSPVQDE YAPVIFSQET VKHIISVDMM SGKEDRDNIL
0401: RSRATGKGAL TAPFPLLKSN HLGVVLTFTV YKYDLPPDAT PEERIEATLG YLGASFDVPS LVERLLEQLA SKQKIVVRLY DITNHTYPTK MYDSDVIASD
0501: DLHISNIDFG DPTRKHVMHC RFKHAPSLPW SAIMISSAVA IIVLLVGYII YATLNSLEEA EDNYTTMRDL KGRAEAADVA KSQFLATVSH EIRTPMNGVL
0601: GMLQMLMDTE LDTTQRDFVV TAQESGKSLI NLINEVLDLA KIESGKIELE AVRFDVRDIL DNVVSLFSEK SWAKGIELAV LVSDQVPDVL IGDPWRFRQI
0701: ITNLVGNSMK FTEQGHIFIR VHLIEEVKRK MEALDDTSPE NIEVTANSKN TMPYNTLSGL EVANNRKTLE SFRMFKDSSD AIDSVNLLVT VEDTGIGITK
0801: DAQTRIFTPF MQADGSTSRT YGGTGIGLSI TKRLVELMGG EIGFVSKPGV SSTFSFTAIF KENRKDPGDI KRYCPEPTPP DFQGMRALVV DGRCARAEVT
0901: MYHLRRLGIQ CDLAATSESA LSALLESCNS SVKSSLNMVL VDKEAWGEDS GLAFFRCLID LRLKGTLKSW QTMPKFFLLA GSITPADSDC LRLAGYSNSI
1001: RKPLRLSTVA ACLSKALGVG LTGRRSRDNS LVLRSVLTGK NILVVDDNAV NRIVAAGALK KYGAIVTCVD SGKEAISRLQ PPHKFDACFM DVQMPEMDGF
1101: EATRLVRSVE SKINDTIQAG EVSSEIYGNK AHWHVPILAM TADVIQATFE GCMECGMDGY VAKPFEEQQL YSAVAHFLEA DATDPLT
Best Arabidopsis Sequence Match ( AT5G35750.1 )
(BLAST)
0001: MSITCELLNL TSKKAKKSSS SDKKWLKKPL FFLILCGSLV IVLVMFLRLG RSQKEETDSC NGEEKVLYRH QNVTRSEIHD LVSLFSDSDQ VTSFECHKES
0101: SPGMWTNYGI TCSLSVRSDK QETRGLPWNL GLGHSISSTS CMCGNLEPIL QQPENLEEEN HEEGLEQGLS SYLRNAWWCL ILGVLVCHKI YVSHSKARGE
0201: RKEKVHLQEA LAPKKQQQRA QTSSRGAGRW RKNILLLGIL GGVSFSVWWF WDTNEEIIMK RRETLANMCD ERARVLQDQF NVSLNHVHAL SILVSTFHHG
0301: KIPSAIDQRT FEEYTERTNF ERPLTSGVAY ALKVPHSERE KFEKEHGWAI KKMETEDQTV VQDCVPENFD PAPIQDEYAP VIFAQETVSH IVSVDMMSGE
0401: EDRENILRAR ASGKGVLTSP FKLLKSNHLG VVLTFAVYDT SLPPDATEEQ RVEATIGYLG ASYDMPSLVE KLLHQLASKQ TIAVDVYDTT NTSGLIKMYG
0501: SEIGDISEQH ISSLDFGDPS RNHEMHCRFK HKLPIPWTAI TPSILVLVIT FLVGYILYEA INRIATVEED CQKMRELKAR AEAADIAKSQ FLATVSHEIR
0601: TPMNGVLGML KMLMDTDLDA KQMDYAQTAH GSGKDLTSLI NEVLDQAKIE SGRLELENVP FDMRFILDNV SSLLSGKANE KGIELAVYVS SQVPDVVVGD
0701: PSRFRQIITN LVGNSIKFTQ ERGHIFISVH LADEVKEPLT IEDAVLKQRL ALGCSESGET VSGFPAVNAW GSWKNFKTCY STESQNSDQI KLLVTVEDTG
0801: VGIPVDAQGR IFTPFMQADS STSRTYGGTG IGLSISKRLV ELMQGEMGFV SEPGIGSTFS FTGVFGKAET NTSITKLERF DLAIQEFTGL RALVIDNRNI
0901: RAEVTRYELR RLGISADIVS SLRMACTCCI SKLENLAMIL IDKDAWNKEE FSVLDELFTR SKVTFTRVPK IFLLATSATL TERSEMKSTG LIDEVVIKPL
1001: RMSVLICCLQ ETLVNGKKRQ PNRQRRNLGH LLREKQILVV DDNLVNRRVA EGALKKYGAI VTCVESGKAA LAMLKPPHNF DACFMDLQMP EMDGFEATRR
1101: VRELEREINK KIASGEVSAE MFCKFSSWHV PILAMTADVI QATHEECMKC GMDGYVSKPF EEEVLYTAVA RFFEPC
Arabidopsis Description
AHK2Histidine kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U2]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.