Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
20632034
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Os10t0362300-03 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G08790.1 | Os10t0362300-03 | AT5G35750.1 | 18642946 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU4Hr1G017430.7 | Barley | nucleus | 78.72 | 78.01 |
TraesCS4B01G098200.1 | Wheat | nucleus | 78.72 | 77.54 |
TraesCS4D01G094400.1 | Wheat | nucleus | 78.72 | 77.31 |
TraesCS4A01G219700.1 | Wheat | nucleus | 78.42 | 77.01 |
Zm00001d000112_P001 | Maize | nucleus | 75.38 | 69.08 |
OQU83033 | Sorghum | nucleus | 74.47 | 63.8 |
GSMUA_Achr10P... | Banana | nucleus | 49.24 | 63.53 |
GSMUA_Achr6P18720_001 | Banana | nucleus | 51.06 | 61.31 |
GSMUA_Achr7P23250_001 | Banana | nucleus | 48.33 | 59.33 |
CDY40732 | Canola | cytosol, nucleus, plastid | 45.9 | 58.53 |
Bra038663.1-P | Field mustard | nucleus | 44.07 | 58.0 |
CDY41537 | Canola | nucleus | 44.07 | 58.0 |
KRH17977 | Soybean | nucleus | 47.11 | 57.84 |
VIT_18s0001g02300.t01 | Wine grape | nucleus | 51.98 | 57.19 |
Os01t0884300-01 | Rice | nucleus | 52.58 | 57.1 |
AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 43.77 | 56.92 |
CDY44788 | Canola | cytosol, nucleus, plastid | 45.29 | 56.87 |
CDX84443 | Canola | nucleus | 43.47 | 56.75 |
CDX78352 | Canola | cytosol, nucleus, plastid | 44.98 | 56.49 |
AT1G01720.1 | Thale cress | nucleus | 49.54 | 56.4 |
KRH63977 | Soybean | nucleus | 49.85 | 56.36 |
CDY21567 | Canola | nucleus | 47.42 | 56.12 |
CDY15158 | Canola | nucleus | 48.33 | 55.59 |
KRH53959 | Soybean | nucleus | 49.85 | 55.59 |
CDY31350 | Canola | nucleus | 44.68 | 55.47 |
Bra029201.1-P | Field mustard | cytosol | 44.68 | 55.47 |
CDX90054 | Canola | nucleus | 48.02 | 55.44 |
Bra033239.1-P | Field mustard | nucleus | 48.02 | 55.44 |
Solyc06g060230.2.1 | Tomato | nucleus | 49.85 | 55.41 |
Bra028645.1-P | Field mustard | nucleus | 46.81 | 55.4 |
CDY40894 | Canola | nucleus | 43.77 | 55.38 |
KRH59618 | Soybean | nucleus | 50.15 | 55.37 |
KRH16387 | Soybean | nucleus | 47.11 | 55.36 |
KRH64668 | Soybean | nucleus | 50.15 | 55.0 |
PGSC0003DMT400023917 | Potato | nucleus | 48.63 | 54.98 |
CDX81120 | Canola | nucleus | 40.12 | 54.77 |
AT5G08790.1 | Thale cress | nucleus | 47.11 | 54.77 |
CDX69919 | Canola | nucleus | 46.2 | 54.68 |
Bra009370.1-P | Field mustard | nucleus | 46.2 | 54.68 |
CDY38346 | Canola | cytosol, nucleus, plastid | 43.16 | 54.62 |
Bra008309.1-P | Field mustard | cytosol, nucleus, plastid | 43.16 | 54.62 |
Solyc11g017470.1.1 | Tomato | nucleus | 48.02 | 54.3 |
Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 46.2 | 54.29 |
KRH53247 | Soybean | nucleus | 49.24 | 54.18 |
PGSC0003DMT400045294 | Potato | nucleus | 48.63 | 54.05 |
Os11t0126900-01 | Rice | nucleus | 27.96 | 53.8 |
VIT_07s0031g02610.t01 | Wine grape | nucleus | 48.02 | 53.74 |
Solyc04g009440.2.1 | Tomato | nucleus | 48.63 | 53.16 |
PGSC0003DMT400082472 | Potato | nucleus | 48.94 | 53.14 |
CDY39846 | Canola | mitochondrion | 44.07 | 49.32 |
CDX84050 | Canola | nucleus | 28.57 | 48.7 |
AT5G63790.2 | Thale cress | cytosol | 46.2 | 47.2 |
Os07t0225300-01 | Rice | nucleus | 37.39 | 44.57 |
Os03t0815100-01 | Rice | nucleus | 40.12 | 41.77 |
Os02t0745250-00 | Rice | nucleus | 22.49 | 39.57 |
Os01t0816100-01 | Rice | nucleus | 37.99 | 39.31 |
Os01t0104200-00 | Rice | nucleus | 35.56 | 34.51 |
Os07t0566500-01 | Rice | nucleus | 37.99 | 29.41 |
Os05t0415400-01 | Rice | extracellular, nucleus, plastid | 27.66 | 29.35 |
Os11t0127600-01 | Rice | nucleus | 31.31 | 28.69 |
Os03t0327800-01 | Rice | nucleus | 33.43 | 28.06 |
Os12t0123700-01 | Rice | nucleus | 33.43 | 27.99 |
Os03t0133000-01 | Rice | nucleus | 26.14 | 27.22 |
Os06t0726300-01 | Rice | nucleus | 23.4 | 26.37 |
Os03t0777000-01 | Rice | nucleus | 25.84 | 23.48 |
Os08t0436700-01 | Rice | nucleus | 26.14 | 22.34 |
Os01t0888300-01 | Rice | nucleus | 27.36 | 19.91 |
Os05t0418800-00 | Rice | plastid | 26.75 | 18.11 |
Os02t0745300-00 | Rice | plastid | 1.82 | 3.64 |
Protein Annotations
MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:4349963 | ProteinID:AAY23268.1 | EMBL:AB028184 | ProteinID:ABA91765.1 |
EMBL:AK063399 | EMBL:AK102475 | ProteinID:BAF27764.1 | ProteinID:BAT12976.1 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0045893 | GO:GO:1901002 |
InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | EnsemblPlantsGene:Os11g0184900 | EnsemblPlants:Os11t0184900-02 |
PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF16 | UniProt:Q53NF7 | SUPFAM:SSF101941 |
UniParc:UPI000009E585 | RefSeq:XP_015617286.1 | SEG:seg | : | : | : |
Description
NAC DOMAIN-CONTAINING PROTEIN 5Similar to OsNAC5 protein [imported]-rice. (Os11t0184900-01);NAC-type transcription factor, Regulation of stress-inducible genes, Stress tolerance (Os11t0184900-02)
Coordinates
chr11:-:4299277..4301783
Molecular Weight (calculated)
35524.6 Da
IEP (calculated)
5.449
GRAVY (calculated)
-0.470
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MECGGALQLP PGFRFHPTDD ELVMYYLCRK CGGLPLAAPV IAEVDLYKFN PWDLPERAMG GEKEWYFFSP RDRKYPNGQR PNRAAGTGYW KATGADKPVG
101: SPRAVAIKKA LVFYAGKPPK GVKTNWIMHE YRLADVDRSA AARKLSKSSH NALRLDDWVL CRIYNKKGVI ERYDTVDAGE DVKPAAAAAA AKGGRIGGGG
201: GAAAMKVELS DYGFYDQEPE SEMLCFDRSG SADRDSMPRL HTDSSGSEHV LSPSPSPDDF PGGGDHDYAE SQPSGGCGGW PGVDWAAVGD DGFVIDSSLF
301: ELPSPAAFSR AAGDGAAFGD MFTYLQKPF
101: SPRAVAIKKA LVFYAGKPPK GVKTNWIMHE YRLADVDRSA AARKLSKSSH NALRLDDWVL CRIYNKKGVI ERYDTVDAGE DVKPAAAAAA AKGGRIGGGG
201: GAAAMKVELS DYGFYDQEPE SEMLCFDRSG SADRDSMPRL HTDSSGSEHV LSPSPSPDDF PGGGDHDYAE SQPSGGCGGW PGVDWAAVGD DGFVIDSSLF
301: ELPSPAAFSR AAGDGAAFGD MFTYLQKPF
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.