Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G094400.1 | Wheat | nucleus | 98.51 | 98.51 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 97.01 | 97.31 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 95.52 | 96.39 |
| Os11t0184900-02 | Rice | nucleus | 77.01 | 78.42 |
| Zm00001d000112_P001 | Maize | nucleus | 77.91 | 72.7 |
| OQU83033 | Sorghum | nucleus | 75.22 | 65.62 |
| GSMUA_Achr10P... | Banana | nucleus | 47.46 | 62.35 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 50.75 | 62.04 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 48.06 | 60.07 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 44.48 | 58.89 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 45.07 | 58.53 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 51.04 | 58.36 |
| KRH17977 | Soybean | nucleus | 46.27 | 57.84 |
| Bra038663.1-P | Field mustard | nucleus | 42.99 | 57.6 |
| CDY41537 | Canola | nucleus | 42.99 | 57.6 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 51.04 | 57.19 |
| CDY40894 | Canola | nucleus | 43.88 | 56.54 |
| VIT_18s0001g02300.t01 | Wine grape | nucleus | 50.45 | 56.52 |
| CDX84443 | Canola | nucleus | 42.39 | 56.35 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 43.88 | 56.11 |
| KRH63977 | Soybean | nucleus | 48.66 | 56.01 |
| Bra008309.1-P | Field mustard | cytosol, nucleus, plastid | 43.28 | 55.77 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 43.28 | 55.77 |
| Bra029201.1-P | Field mustard | cytosol | 43.88 | 55.47 |
| CDY31350 | Canola | nucleus | 43.88 | 55.47 |
| Bra028645.1-P | Field mustard | nucleus | 45.97 | 55.4 |
| CDY21567 | Canola | nucleus | 45.97 | 55.4 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 43.28 | 55.34 |
| KRH53959 | Soybean | nucleus | 48.66 | 55.25 |
| CDX90054 | Canola | nucleus | 46.87 | 55.09 |
| Bra033239.1-P | Field mustard | nucleus | 46.87 | 55.09 |
| AT1G01720.1 | Thale cress | nucleus | 47.46 | 55.02 |
| KRH16387 | Soybean | nucleus | 45.97 | 55.0 |
| CDY15158 | Canola | nucleus | 46.87 | 54.9 |
| AT5G08790.1 | Thale cress | nucleus | 46.27 | 54.77 |
| Solyc06g060230.2.1 | Tomato | nucleus | 48.36 | 54.73 |
| CDX69919 | Canola | nucleus | 45.07 | 54.32 |
| Bra009370.1-P | Field mustard | nucleus | 45.07 | 54.32 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 47.46 | 54.08 |
| PGSC0003DMT400023917 | Potato | nucleus | 46.87 | 53.95 |
| KRH53247 | Soybean | nucleus | 48.06 | 53.85 |
| PGSC0003DMT400045294 | Potato | nucleus | 47.46 | 53.72 |
| KRH64668 | Soybean | nucleus | 48.06 | 53.67 |
| Solyc11g017470.1.1 | Tomato | nucleus | 46.57 | 53.61 |
| Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 44.78 | 53.57 |
| KRH59618 | Soybean | nucleus | 47.46 | 53.36 |
| CDX81120 | Canola | nucleus | 38.21 | 53.11 |
| PGSC0003DMT400082472 | Potato | nucleus | 47.46 | 52.48 |
| Solyc04g009440.2.1 | Tomato | nucleus | 46.87 | 52.16 |
| CDX84050 | Canola | nucleus | 28.96 | 50.26 |
| CDY39846 | Canola | mitochondrion | 42.99 | 48.98 |
| AT5G63790.2 | Thale cress | cytosol | 44.18 | 45.96 |
| TraesCS6A01G057400.1 | Wheat | nucleus | 34.93 | 40.34 |
| TraesCS3A01G339600.1 | Wheat | nucleus | 36.12 | 38.53 |
| TraesCS5A01G468300.1 | Wheat | nucleus | 37.01 | 37.92 |
| TraesCS3A01G078400.1 | Wheat | nucleus | 35.52 | 33.71 |
| TraesCS3A01G162900.1 | Wheat | cytosol | 29.25 | 31.82 |
| TraesCS2A01G101900.1 | Wheat | nucleus | 32.84 | 31.61 |
| TraesCS2A01G102000.1 | Wheat | nucleus | 33.43 | 31.37 |
| TraesCS5A01G143200.1 | Wheat | nucleus | 32.54 | 30.36 |
| TraesCS4A01G131000.1 | Wheat | nucleus | 31.94 | 30.23 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 35.22 | 28.99 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 34.63 | 27.88 |
| TraesCS7A01G549000.1 | Wheat | cytosol, nucleus, plastid | 22.99 | 25.93 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 24.48 | 23.91 |
| TraesCS2A01G063400.1 | Wheat | nucleus | 19.4 | 23.13 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 24.18 | 23.01 |
| TraesCS5A01G500400.1 | Wheat | nucleus | 23.88 | 22.99 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 26.57 | 22.88 |
| TraesCS2A01G063300.1 | Wheat | nucleus | 25.97 | 22.83 |
| TraesCS5A01G500500.1 | Wheat | nucleus | 22.69 | 22.49 |
| TraesCS1A01G261800.1 | Wheat | nucleus | 26.27 | 22.45 |
| TraesCS7A01G318500.1 | Wheat | nucleus | 25.97 | 22.42 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 25.07 | 22.28 |
| TraesCS2A01G063200.1 | Wheat | nucleus | 25.67 | 22.22 |
| TraesCS5A01G228000.1 | Wheat | nucleus | 25.67 | 21.83 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 24.78 | 21.78 |
| TraesCS5A01G500700.1 | Wheat | nucleus | 22.99 | 21.63 |
| TraesCS3A01G403300.1 | Wheat | nucleus | 25.97 | 21.12 |
| TraesCS5A01G500600.1 | Wheat | nucleus | 22.99 | 20.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0045893 | GO:GO:1901002 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF81 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS4A01G219700 |
| EnsemblPlants:TraesCS4A01G219700.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:521918428..521919907
Molecular Weight (calculated)
36695.9 Da
IEP (calculated)
6.405
GRAVY (calculated)
-0.578
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHGFDGALQ LPPGFRFHPT DEELVMYYLC RKCGGLPIAA PVIAEVDLYK FEPWRLPEKA AGGGPDAKEW YFFSPRDRKY PNGSRPNRAA GTGYWKATGA
101: DKPVGSPRPV AIKKALVFYA GKPPKGVKTN WIMHEYRLAD VDRSAAARKK SNNALRLDDW VLCRIYNKKG VIERYDTADS DVADVKPAPA PAARNPRPGQ
201: YHAAGPAMKV ELSDYGFYQQ PSPPATEMLC FDRSGSADRD SNSNHSMPRL HTDSSSSERA LSSPSPDFPS DMDYAESQHA AGLAAGWPGD DWGGVIEDDG
301: FVIDGSLIFD PPSPGAFARD AAAFGDMLTY LQKPF
101: DKPVGSPRPV AIKKALVFYA GKPPKGVKTN WIMHEYRLAD VDRSAAARKK SNNALRLDDW VLCRIYNKKG VIERYDTADS DVADVKPAPA PAARNPRPGQ
201: YHAAGPAMKV ELSDYGFYQQ PSPPATEMLC FDRSGSADRD SNSNHSMPRL HTDSSSSERA LSSPSPDFPS DMDYAESQHA AGLAAGWPGD DWGGVIEDDG
301: FVIDGSLIFD PPSPGAFARD AAAFGDMLTY LQKPF
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.