Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G096300.1 | Wheat | nucleus | 95.91 | 97.08 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 87.26 | 89.19 |
| HORVU6Hr1G019380.2 | Barley | plastid | 84.86 | 86.1 |
| CDX82430 | Canola | nucleus | 34.13 | 71.36 |
| CDY22671 | Canola | nucleus | 33.65 | 70.35 |
| Os07t0566500-01 | Rice | nucleus | 69.23 | 67.76 |
| OQU90111 | Sorghum | nucleus | 66.83 | 66.51 |
| Zm00001d021818_P002 | Maize | nucleus | 64.9 | 64.44 |
| VIT_00s0375g00040.t01 | Wine grape | nucleus | 42.55 | 53.47 |
| Bra027101.1-P | Field mustard | nucleus | 38.7 | 50.47 |
| CDY12886 | Canola | nucleus | 38.94 | 50.47 |
| Solyc07g063420.2.1 | Tomato | nucleus | 39.66 | 50.15 |
| CDY40970 | Canola | nucleus | 38.7 | 50.0 |
| AT1G61110.1 | Thale cress | nucleus | 38.7 | 49.85 |
| PGSC0003DMT400049664 | Potato | nucleus | 40.38 | 49.56 |
| CDY56427 | Canola | nucleus | 38.94 | 49.54 |
| AT1G52880.1 | Thale cress | nucleus | 37.74 | 49.06 |
| CDX97675 | Canola | nucleus | 40.38 | 48.98 |
| CDY69545 | Canola | nucleus | 36.54 | 48.72 |
| Bra027237.1-P | Field mustard | nucleus | 40.87 | 48.43 |
| CDY53806 | Canola | nucleus | 36.78 | 48.11 |
| KRH22138 | Soybean | nucleus | 43.27 | 48.0 |
| KRH27199 | Soybean | nucleus | 43.03 | 47.73 |
| CDY20131 | Canola | nucleus | 39.9 | 47.43 |
| CDX98562 | Canola | nucleus | 40.38 | 46.8 |
| Bra018997.1-P | Field mustard | nucleus | 36.78 | 46.79 |
| AT3G15510.1 | Thale cress | nucleus | 40.87 | 46.7 |
| Bra021114.1-P | Field mustard | nucleus | 40.14 | 46.65 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 36.54 | 46.63 |
| PGSC0003DMT400064428 | Potato | nucleus | 39.18 | 46.44 |
| Bra001597.1-P | Field mustard | nucleus | 38.22 | 45.43 |
| Solyc10g006880.2.1 | Tomato | nucleus | 38.22 | 44.79 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 37.74 | 43.73 |
| TraesCS6A01G057400.1 | Wheat | nucleus | 28.61 | 41.03 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 29.33 | 40.8 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 28.61 | 40.61 |
| TraesCS3A01G162900.1 | Wheat | cytosol | 29.09 | 39.29 |
| TraesCS5A01G143200.1 | Wheat | nucleus | 33.41 | 38.72 |
| TraesCS4A01G131000.1 | Wheat | nucleus | 32.69 | 38.42 |
| TraesCS5A01G468300.1 | Wheat | nucleus | 29.33 | 37.31 |
| TraesCS3A01G339600.1 | Wheat | nucleus | 27.88 | 36.94 |
| TraesCS3A01G078400.1 | Wheat | nucleus | 31.25 | 36.83 |
| TraesCS2A01G101900.1 | Wheat | nucleus | 30.77 | 36.78 |
| TraesCS2A01G102000.1 | Wheat | nucleus | 31.25 | 36.41 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 27.88 | 34.63 |
| TraesCS7A01G549000.1 | Wheat | cytosol, nucleus, plastid | 19.95 | 27.95 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 21.88 | 26.53 |
| TraesCS5A01G500500.1 | Wheat | nucleus | 20.67 | 25.44 |
| TraesCS2A01G063400.1 | Wheat | nucleus | 17.07 | 25.27 |
| TraesCS2A01G063300.1 | Wheat | nucleus | 23.08 | 25.2 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 23.56 | 25.19 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 21.15 | 25.0 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 22.84 | 24.93 |
| TraesCS5A01G228000.1 | Wheat | nucleus | 23.32 | 24.62 |
| TraesCS5A01G500400.1 | Wheat | nucleus | 20.43 | 24.43 |
| TraesCS2A01G063200.1 | Wheat | nucleus | 22.6 | 24.29 |
| TraesCS5A01G500700.1 | Wheat | nucleus | 20.67 | 24.16 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 21.88 | 24.14 |
| TraesCS1A01G261800.1 | Wheat | nucleus | 22.6 | 23.98 |
| TraesCS7A01G318500.1 | Wheat | nucleus | 22.12 | 23.71 |
| TraesCS5A01G500600.1 | Wheat | nucleus | 20.67 | 23.31 |
| TraesCS3A01G403300.1 | Wheat | nucleus | 22.12 | 22.33 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR45430 | PANTHER:PTHR45430:SF1 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS6A01G108300 | EnsemblPlants:TraesCS6A01G108300.2 | SEG:seg |
Description
No Description!
Coordinates
chr6A:-:77098570..77100127
Molecular Weight (calculated)
44529.3 Da
IEP (calculated)
9.735
GRAVY (calculated)
-0.469
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSMGSSDSS SGSAQKAARH QHEPPPPRQR GSAPELPPGF RFHPTDEELV VHYLKKKAAK VPLPVTIIAE VDLYKFDPWE LPEKATFGEQ EWYFFSPRDR
101: KYPNGARPNR AATSGYWKAT GTDKPILASG TGCGLVREKL GVKKALVFYR GKPPKGLKTN WIMHEYRLTD ASGSTTTSRP PPPVTGGSRA AASLRVRTRV
201: DRTLDDWVLC RIYKKINKAA AGDQQRSTEC EDSVEDAVTA YPLYATAGMA GAGAHGSNYA SPSLLHHQDS HFLEGLFTAD DAGLSAGATS LSHLAAAARA
301: SPAPTKQFLA PSSSTPFNWL DASPAGILPQ ARNFPGFNRS RNVGNMSLSS TADMAGAAGN AVNAMSAFMN PLPVQDGTYH QHHVILGAPL APEATTGGAT
401: SGFQHPVQVS GVNWNP
101: KYPNGARPNR AATSGYWKAT GTDKPILASG TGCGLVREKL GVKKALVFYR GKPPKGLKTN WIMHEYRLTD ASGSTTTSRP PPPVTGGSRA AASLRVRTRV
201: DRTLDDWVLC RIYKKINKAA AGDQQRSTEC EDSVEDAVTA YPLYATAGMA GAGAHGSNYA SPSLLHHQDS HFLEGLFTAD DAGLSAGATS LSHLAAAARA
301: SPAPTKQFLA PSSSTPFNWL DASPAGILPQ ARNFPGFNRS RNVGNMSLSS TADMAGAAGN AVNAMSAFMN PLPVQDGTYH QHHVILGAPL APEATTGGAT
401: SGFQHPVQVS GVNWNP
001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VIHYLKRKAD SVPLPVAIIA DVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVIST GGGGSKKVGV KKALVFYSGK PPKGVKSDWI MHEYRLTDNK PTHICDFGNK KNSLRLDDWV LCRIYKKNNS TASRHHHHLH HIHLDNDHHR
201: HDMMIDDDRF RHVPPGLHFP AIFSDNNDPT AIYDGGGGGY GGGSYSMNHC FASGSKQEQL FPPVMMMTSL NQDSGIGSSS SPSKRFNGGG VGDCSTSMAA
301: TPLMQNQGGI YQLPGLNWYS
101: TGTDKPVIST GGGGSKKVGV KKALVFYSGK PPKGVKSDWI MHEYRLTDNK PTHICDFGNK KNSLRLDDWV LCRIYKKNNS TASRHHHHLH HIHLDNDHHR
201: HDMMIDDDRF RHVPPGLHFP AIFSDNNDPT AIYDGGGGGY GGGSYSMNHC FASGSKQEQL FPPVMMMTSL NQDSGIGSSS SPSKRFNGGG VGDCSTSMAA
301: TPLMQNQGGI YQLPGLNWYS
Arabidopsis Description
NAC018NARS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W6K4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.