Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra018997.1-P | Field mustard | nucleus | 96.79 | 92.35 |
CDY53806 | Canola | nucleus | 93.91 | 92.14 |
CDX82430 | Canola | nucleus | 50.0 | 78.39 |
CDY22671 | Canola | nucleus | 49.04 | 76.88 |
CDY26031 | Canola | cytosol | 31.09 | 64.24 |
AT1G52880.1 | Thale cress | nucleus | 65.06 | 63.44 |
CDY56427 | Canola | nucleus | 65.06 | 62.08 |
CDX97675 | Canola | nucleus | 66.67 | 60.64 |
CDY26032 | Canola | cytosol | 30.77 | 59.63 |
CDY20131 | Canola | nucleus | 66.03 | 58.86 |
CDX98562 | Canola | nucleus | 65.71 | 57.1 |
VIT_19s0014g03300.t01 | Wine grape | nucleus | 61.86 | 54.67 |
CDY12886 | Canola | nucleus | 51.6 | 50.16 |
CDY40970 | Canola | nucleus | 51.6 | 50.0 |
KRH22138 | Soybean | nucleus | 58.97 | 49.07 |
PGSC0003DMT400064428 | Potato | nucleus | 54.81 | 48.72 |
KRH27199 | Soybean | nucleus | 58.01 | 48.27 |
Solyc10g006880.2.1 | Tomato | nucleus | 54.81 | 48.17 |
CDX82432 | Canola | nucleus | 36.22 | 45.75 |
GSMUA_Achr9P19520_001 | Banana | nucleus | 47.44 | 45.4 |
CDY40732 | Canola | cytosol, nucleus, plastid | 37.5 | 45.35 |
CDY41537 | Canola | nucleus | 36.22 | 45.2 |
CDY44788 | Canola | cytosol, nucleus, plastid | 37.5 | 44.66 |
CDY40894 | Canola | nucleus | 37.18 | 44.62 |
CDX84443 | Canola | nucleus | 35.9 | 44.44 |
CDX78352 | Canola | cytosol, nucleus, plastid | 36.86 | 43.89 |
CDX90054 | Canola | nucleus | 40.06 | 43.86 |
CDY38346 | Canola | cytosol, nucleus, plastid | 36.54 | 43.85 |
CDY40930 | Canola | cytosol | 37.82 | 43.7 |
CDX95931 | Canola | cytosol | 37.82 | 43.7 |
CDY15158 | Canola | nucleus | 39.74 | 43.36 |
CDY07348 | Canola | nucleus | 37.5 | 43.17 |
CDY31350 | Canola | nucleus | 36.54 | 43.02 |
CDY51500 | Canola | nucleus | 37.5 | 43.01 |
CDY21567 | Canola | nucleus | 37.82 | 42.45 |
GSMUA_Achr1P08860_001 | Banana | nucleus | 48.72 | 42.34 |
CDX69919 | Canola | nucleus | 37.5 | 42.09 |
CDY42902 | Canola | nucleus | 37.5 | 41.79 |
CDX81120 | Canola | nucleus | 31.73 | 41.08 |
CDX89253 | Canola | nucleus | 38.78 | 40.33 |
CDY29836 | Canola | nucleus | 38.14 | 39.67 |
CDY29303 | Canola | nucleus | 38.14 | 39.67 |
CDX92828 | Canola | nucleus | 38.14 | 39.67 |
TraesCS2D01G214100.1 | Wheat | nucleus | 49.68 | 38.85 |
OQU90111 | Sorghum | nucleus | 51.92 | 38.76 |
CDX75833 | Canola | nucleus | 36.54 | 38.38 |
HORVU2Hr1G039640.2 | Barley | nucleus | 49.68 | 38.27 |
TraesCS2A01G201800.2 | Wheat | nucleus | 49.68 | 38.08 |
Zm00001d021818_P002 | Maize | nucleus | 50.96 | 37.95 |
TraesCS2B01G228900.1 | Wheat | nucleus | 49.36 | 37.93 |
CDX84050 | Canola | nucleus | 23.4 | 37.82 |
CDX98560 | Canola | nucleus | 38.78 | 37.81 |
CDY39846 | Canola | mitochondrion | 35.58 | 37.76 |
CDY50880 | Canola | nucleus | 39.1 | 37.54 |
Os07t0566500-01 | Rice | nucleus | 50.96 | 37.41 |
TraesCS6D01G096300.1 | Wheat | nucleus | 49.04 | 37.23 |
CDX97674 | Canola | nucleus | 38.14 | 37.07 |
CDY21844 | Canola | nucleus | 37.18 | 36.59 |
TraesCS6A01G108300.2 | Wheat | nucleus | 48.72 | 36.54 |
CDY20109 | Canola | nucleus | 36.86 | 36.28 |
HORVU6Hr1G019380.2 | Barley | plastid | 47.44 | 36.1 |
CDY29983 | Canola | nucleus | 41.03 | 36.06 |
CDY55499 | Canola | nucleus | 28.53 | 31.9 |
CDY53654 | Canola | nucleus | 28.53 | 31.9 |
CDX82429 | Canola | plastid | 10.9 | 31.78 |
CDY14865 | Canola | nucleus | 27.56 | 31.05 |
CDY30373 | Canola | nucleus | 27.56 | 31.05 |
CDY43391 | Canola | nucleus | 27.56 | 29.15 |
CDY11662 | Canola | nucleus | 31.09 | 28.96 |
CDY64562 | Canola | nucleus | 27.24 | 28.91 |
CDY24238 | Canola | nucleus | 28.21 | 28.66 |
CDY47485 | Canola | nucleus | 25.32 | 28.32 |
CDY47486 | Canola | nucleus | 25.32 | 28.32 |
CDY26794 | Canola | nucleus | 25.32 | 28.32 |
CDX82569 | Canola | nucleus | 27.24 | 28.15 |
CDX67438 | Canola | nucleus | 30.13 | 28.06 |
CDY39487 | Canola | nucleus | 24.68 | 27.4 |
CDY02222 | Canola | nucleus | 24.68 | 27.4 |
CDY60122 | Canola | nucleus | 27.56 | 26.3 |
CDX71329 | Canola | endoplasmic reticulum, extracellular | 25.0 | 25.41 |
CDY31385 | Canola | cytosol | 25.0 | 24.45 |
CDY65270 | Canola | nucleus | 30.77 | 24.3 |
CDY46433 | Canola | nucleus | 30.45 | 23.06 |
CDY01755 | Canola | nucleus | 29.17 | 22.92 |
CDY23551 | Canola | nucleus | 26.92 | 22.4 |
CDX95910 | Canola | nucleus | 28.53 | 21.76 |
CDY17437 | Canola | nucleus | 27.88 | 21.43 |
CDY09368 | Canola | nucleus | 27.88 | 21.43 |
CDY15835 | Canola | nucleus | 27.88 | 21.38 |
CDY04129 | Canola | nucleus | 27.56 | 21.08 |
CDY03050 | Canola | nucleus | 27.56 | 20.77 |
CDY17595 | Canola | nucleus | 27.56 | 20.62 |
CDY42810 | Canola | nucleus | 28.53 | 17.45 |
CDX83510 | Canola | nucleus | 27.88 | 17.06 |
CDY54324 | Canola | extracellular | 5.45 | 6.14 |
CDY16201 | Canola | plastid | 4.49 | 5.32 |
Protein Annotations
MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078JSZ8 | UniProt:A0A078JSZ8 | EnsemblPlants:CDY69545 | ProteinID:CDY69545 |
ProteinID:CDY69545.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00088528001 | InterPro:IPR003441 |
InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45430 |
SUPFAM:SSF101941 | UniParc:UPI0004EE03BB | SEG:seg | : | : | : |
Description
BnaCnng64100DBnaCnng64100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSZ8]
Coordinates
chrLK039670:+:2064..3554
Molecular Weight (calculated)
34674.4 Da
IEP (calculated)
8.232
GRAVY (calculated)
-0.794
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTDSSGGP PPQPNLPPGF RFHPTDEELV IHYLKRKADS SPLPVAIIAD VDLYKHDPWE LPEKALFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT
101: GTDKPVISTG DGNKKVGVKK ALVFYTGKPP KGIKSDWIMH EYRLADNKPS LRCDFGHKKN SLRLDDWVLC RIYKKNNSTS SRHHHHHHLD NDKDDDLYRL
201: PMSVPGQNVS RTNLFSAVFS DNNNPAAIYD GGGGGTGYSM NHDFASSSGL NQKPNIPMPF WDQDPAKRFN GGVGDGSDMV SSVAAPSLMQ QQGGVLGDGL
301: DRTSYQLTGL NW
101: GTDKPVISTG DGNKKVGVKK ALVFYTGKPP KGIKSDWIMH EYRLADNKPS LRCDFGHKKN SLRLDDWVLC RIYKKNNSTS SRHHHHHHLD NDKDDDLYRL
201: PMSVPGQNVS RTNLFSAVFS DNNNPAAIYD GGGGGTGYSM NHDFASSSGL NQKPNIPMPF WDQDPAKRFN GGVGDGSDMV SSVAAPSLMQ QQGGVLGDGL
301: DRTSYQLTGL NW
001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VVHYLKRKAA SAPLPVAIIA EVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS
Arabidopsis Description
NAC056NAC transcription factor 56 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.