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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018997.1-P Field mustard nucleus 96.79 92.35
CDY53806 Canola nucleus 93.91 92.14
CDX82430 Canola nucleus 50.0 78.39
CDY22671 Canola nucleus 49.04 76.88
CDY26031 Canola cytosol 31.09 64.24
AT1G52880.1 Thale cress nucleus 65.06 63.44
CDY56427 Canola nucleus 65.06 62.08
CDX97675 Canola nucleus 66.67 60.64
CDY26032 Canola cytosol 30.77 59.63
CDY20131 Canola nucleus 66.03 58.86
CDX98562 Canola nucleus 65.71 57.1
VIT_19s0014g03300.t01 Wine grape nucleus 61.86 54.67
CDY12886 Canola nucleus 51.6 50.16
CDY40970 Canola nucleus 51.6 50.0
KRH22138 Soybean nucleus 58.97 49.07
PGSC0003DMT400064428 Potato nucleus 54.81 48.72
KRH27199 Soybean nucleus 58.01 48.27
Solyc10g006880.2.1 Tomato nucleus 54.81 48.17
CDX82432 Canola nucleus 36.22 45.75
GSMUA_Achr9P19520_001 Banana nucleus 47.44 45.4
CDY40732 Canola cytosol, nucleus, plastid 37.5 45.35
CDY41537 Canola nucleus 36.22 45.2
CDY44788 Canola cytosol, nucleus, plastid 37.5 44.66
CDY40894 Canola nucleus 37.18 44.62
CDX84443 Canola nucleus 35.9 44.44
CDX78352 Canola cytosol, nucleus, plastid 36.86 43.89
CDX90054 Canola nucleus 40.06 43.86
CDY38346 Canola cytosol, nucleus, plastid 36.54 43.85
CDY40930 Canola cytosol 37.82 43.7
CDX95931 Canola cytosol 37.82 43.7
CDY15158 Canola nucleus 39.74 43.36
CDY07348 Canola nucleus 37.5 43.17
CDY31350 Canola nucleus 36.54 43.02
CDY51500 Canola nucleus 37.5 43.01
CDY21567 Canola nucleus 37.82 42.45
GSMUA_Achr1P08860_001 Banana nucleus 48.72 42.34
CDX69919 Canola nucleus 37.5 42.09
CDY42902 Canola nucleus 37.5 41.79
CDX81120 Canola nucleus 31.73 41.08
CDX89253 Canola nucleus 38.78 40.33
CDY29836 Canola nucleus 38.14 39.67
CDY29303 Canola nucleus 38.14 39.67
CDX92828 Canola nucleus 38.14 39.67
TraesCS2D01G214100.1 Wheat nucleus 49.68 38.85
OQU90111 Sorghum nucleus 51.92 38.76
CDX75833 Canola nucleus 36.54 38.38
HORVU2Hr1G039640.2 Barley nucleus 49.68 38.27
TraesCS2A01G201800.2 Wheat nucleus 49.68 38.08
Zm00001d021818_P002 Maize nucleus 50.96 37.95
TraesCS2B01G228900.1 Wheat nucleus 49.36 37.93
CDX84050 Canola nucleus 23.4 37.82
CDX98560 Canola nucleus 38.78 37.81
CDY39846 Canola mitochondrion 35.58 37.76
CDY50880 Canola nucleus 39.1 37.54
Os07t0566500-01 Rice nucleus 50.96 37.41
TraesCS6D01G096300.1 Wheat nucleus 49.04 37.23
CDX97674 Canola nucleus 38.14 37.07
CDY21844 Canola nucleus 37.18 36.59
TraesCS6A01G108300.2 Wheat nucleus 48.72 36.54
CDY20109 Canola nucleus 36.86 36.28
HORVU6Hr1G019380.2 Barley plastid 47.44 36.1
CDY29983 Canola nucleus 41.03 36.06
CDY55499 Canola nucleus 28.53 31.9
CDY53654 Canola nucleus 28.53 31.9
CDX82429 Canola plastid 10.9 31.78
CDY14865 Canola nucleus 27.56 31.05
CDY30373 Canola nucleus 27.56 31.05
CDY43391 Canola nucleus 27.56 29.15
CDY11662 Canola nucleus 31.09 28.96
CDY64562 Canola nucleus 27.24 28.91
CDY24238 Canola nucleus 28.21 28.66
CDY47485 Canola nucleus 25.32 28.32
CDY47486 Canola nucleus 25.32 28.32
CDY26794 Canola nucleus 25.32 28.32
CDX82569 Canola nucleus 27.24 28.15
CDX67438 Canola nucleus 30.13 28.06
CDY39487 Canola nucleus 24.68 27.4
CDY02222 Canola nucleus 24.68 27.4
CDY60122 Canola nucleus 27.56 26.3
CDX71329 Canola endoplasmic reticulum, extracellular 25.0 25.41
CDY31385 Canola cytosol 25.0 24.45
CDY65270 Canola nucleus 30.77 24.3
CDY46433 Canola nucleus 30.45 23.06
CDY01755 Canola nucleus 29.17 22.92
CDY23551 Canola nucleus 26.92 22.4
CDX95910 Canola nucleus 28.53 21.76
CDY17437 Canola nucleus 27.88 21.43
CDY09368 Canola nucleus 27.88 21.43
CDY15835 Canola nucleus 27.88 21.38
CDY04129 Canola nucleus 27.56 21.08
CDY03050 Canola nucleus 27.56 20.77
CDY17595 Canola nucleus 27.56 20.62
CDY42810 Canola nucleus 28.53 17.45
CDX83510 Canola nucleus 27.88 17.06
CDY54324 Canola extracellular 5.45 6.14
CDY16201 Canola plastid 4.49 5.32
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150GO:A0A078JSZ8UniProt:A0A078JSZ8EnsemblPlants:CDY69545ProteinID:CDY69545
ProteinID:CDY69545.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00088528001InterPro:IPR003441
InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005PANTHER:PTHR45430
SUPFAM:SSF101941UniParc:UPI0004EE03BBSEG:seg:::
Description
BnaCnng64100DBnaCnng64100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSZ8]
Coordinates
chrLK039670:+:2064..3554
Molecular Weight (calculated)
34674.4 Da
IEP (calculated)
8.232
GRAVY (calculated)
-0.794
Length
312 amino acids
Sequence
(BLAST)
001: MESTDSSGGP PPQPNLPPGF RFHPTDEELV IHYLKRKADS SPLPVAIIAD VDLYKHDPWE LPEKALFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT
101: GTDKPVISTG DGNKKVGVKK ALVFYTGKPP KGIKSDWIMH EYRLADNKPS LRCDFGHKKN SLRLDDWVLC RIYKKNNSTS SRHHHHHHLD NDKDDDLYRL
201: PMSVPGQNVS RTNLFSAVFS DNNNPAAIYD GGGGGTGYSM NHDFASSSGL NQKPNIPMPF WDQDPAKRFN GGVGDGSDMV SSVAAPSLMQ QQGGVLGDGL
301: DRTSYQLTGL NW
Best Arabidopsis Sequence Match ( AT3G15510.1 )
(BLAST)
001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VVHYLKRKAA SAPLPVAIIA EVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS
Arabidopsis Description
NAC056NAC transcription factor 56 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD44]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.