Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013034.1-P | Field mustard | nucleus | 99.64 | 99.64 |
| CDY02222 | Canola | nucleus | 98.93 | 98.93 |
| CDY26794 | Canola | nucleus | 90.39 | 91.04 |
| CDY47485 | Canola | nucleus | 89.32 | 89.96 |
| CDY47486 | Canola | nucleus | 89.32 | 89.96 |
| AT2G17040.1 | Thale cress | nucleus | 83.99 | 85.51 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 85.05 | 77.85 |
| CDY31385 | Canola | cytosol | 83.63 | 73.67 |
| VIT_03s0038g03410.t01 | Wine grape | nucleus | 58.72 | 59.14 |
| KRH24118 | Soybean | cytosol | 60.85 | 57.58 |
| KRH29090 | Soybean | nucleus | 60.85 | 56.62 |
| Solyc10g055760.1.1 | Tomato | cytosol | 56.58 | 56.18 |
| PGSC0003DMT400028190 | Potato | nucleus | 56.58 | 55.02 |
| GSMUA_Achr11P... | Banana | nucleus | 47.69 | 51.15 |
| GSMUA_Achr5P19060_001 | Banana | nucleus | 43.42 | 50.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.48 | 47.89 |
| GSMUA_Achr1P02710_001 | Banana | nucleus | 46.26 | 47.79 |
| GSMUA_Achr7P04030_001 | Banana | nucleus | 46.26 | 45.61 |
| Os06t0726300-01 | Rice | nucleus | 47.33 | 45.55 |
| Os03t0133000-01 | Rice | nucleus | 50.89 | 45.25 |
| Zm00001d014843_P001 | Maize | nucleus | 43.06 | 45.15 |
| GSMUA_Achr3P00560_001 | Banana | nucleus | 44.13 | 44.44 |
| TraesCS7D01G535300.1 | Wheat | cytosol, nucleus, plastid | 46.62 | 43.96 |
| GSMUA_Achr3P14720_001 | Banana | nucleus | 45.2 | 43.94 |
| TraesCS7A01G549000.1 | Wheat | cytosol, nucleus, plastid | 46.26 | 43.77 |
| TraesCS7B01G472200.1 | Wheat | cytosol, nucleus, plastid | 45.91 | 43.43 |
| TraesCS7B01G472600.1 | Wheat | cytosol, nucleus, plastid | 46.26 | 43.33 |
| EER92917 | Sorghum | nucleus | 49.82 | 42.81 |
| Zm00001d048347_P001 | Maize | nucleus | 48.04 | 42.59 |
| TraesCS4D01G325700.1 | Wheat | nucleus | 52.31 | 42.36 |
| Zm00001d027530_P001 | Maize | nucleus | 48.75 | 42.15 |
| TraesCS5A01G500400.1 | Wheat | nucleus | 51.96 | 41.95 |
| TraesCS4B01G328800.1 | Wheat | nucleus | 51.6 | 41.79 |
| CDY26031 | Canola | cytosol | 22.42 | 41.72 |
| TraesCS5A01G500500.1 | Wheat | nucleus | 50.18 | 41.72 |
| TraesCS4B01G329100.1 | Wheat | nucleus | 51.96 | 41.48 |
| TraesCS4B01G328600.1 | Wheat | nucleus | 51.6 | 41.31 |
| HORVU4Hr1G081450.1 | Barley | nucleus | 52.31 | 41.29 |
| TraesCS4B01G328900.1 | Wheat | nucleus | 50.89 | 40.62 |
| Zm00001d036364_P001 | Maize | nucleus | 46.98 | 40.49 |
| TraesCS4D01G325800.1 | Wheat | nucleus | 50.89 | 40.4 |
| CDY26032 | Canola | cytosol | 23.13 | 40.37 |
| TraesCS5A01G500700.1 | Wheat | nucleus | 50.89 | 40.17 |
| TraesCS4B01G328700.1 | Wheat | nucleus | 50.18 | 39.94 |
| HORVU4Hr1G081430.1 | Barley | cytosol, nucleus | 51.6 | 39.19 |
| TraesCS5A01G500600.1 | Wheat | nucleus | 51.25 | 39.02 |
| CDY22671 | Canola | nucleus | 26.69 | 37.69 |
| HORVU4Hr1G081440.3 | Barley | nucleus | 50.89 | 37.63 |
| CDX82430 | Canola | nucleus | 26.33 | 37.19 |
| GSMUA_Achr1P18110_001 | Banana | cytosol, nucleus, plastid | 27.05 | 35.02 |
| KXG20943 | Sorghum | nucleus, plastid | 47.69 | 34.72 |
| CDY40894 | Canola | nucleus | 28.11 | 30.38 |
| CDY30373 | Canola | nucleus | 29.89 | 30.32 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 27.76 | 30.0 |
| CDY41537 | Canola | nucleus | 26.69 | 30.0 |
| CDX84443 | Canola | nucleus | 26.69 | 29.76 |
| CDY14865 | Canola | nucleus | 29.18 | 29.6 |
| CDX82432 | Canola | nucleus | 25.98 | 29.55 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 27.05 | 29.46 |
| CDY53654 | Canola | nucleus | 28.83 | 29.03 |
| CDY55499 | Canola | nucleus | 28.83 | 29.03 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 27.05 | 29.01 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 27.05 | 29.01 |
| CDY43391 | Canola | nucleus | 30.25 | 28.81 |
| CDY64562 | Canola | nucleus | 29.89 | 28.57 |
| CDX95931 | Canola | cytosol | 27.4 | 28.52 |
| CDY40930 | Canola | cytosol | 27.4 | 28.52 |
| CDX82569 | Canola | nucleus | 30.25 | 28.15 |
| CDY07348 | Canola | nucleus | 27.05 | 28.04 |
| CDY51500 | Canola | nucleus | 27.05 | 27.94 |
| CDY21567 | Canola | nucleus | 27.4 | 27.7 |
| CDY24238 | Canola | nucleus | 30.25 | 27.69 |
| CDX90054 | Canola | nucleus | 27.76 | 27.37 |
| CDX69919 | Canola | nucleus | 27.05 | 27.34 |
| CDX89253 | Canola | nucleus | 29.18 | 27.33 |
| CDY29303 | Canola | nucleus | 29.18 | 27.33 |
| CDY31350 | Canola | nucleus | 25.62 | 27.17 |
| CDY42902 | Canola | nucleus | 27.05 | 27.14 |
| CDX92828 | Canola | nucleus | 28.83 | 27.0 |
| CDY29836 | Canola | nucleus | 28.83 | 27.0 |
| CDX81120 | Canola | nucleus | 23.13 | 26.97 |
| CDY15158 | Canola | nucleus | 27.4 | 26.92 |
| CDY60122 | Canola | nucleus | 30.61 | 26.3 |
| CDX75833 | Canola | nucleus | 26.33 | 24.92 |
| CDX84050 | Canola | nucleus | 17.08 | 24.87 |
| CDY69545 | Canola | nucleus | 27.4 | 24.68 |
| CDY39846 | Canola | mitochondrion | 25.62 | 24.49 |
| CDX67438 | Canola | nucleus | 29.18 | 24.48 |
| CDY12886 | Canola | nucleus | 27.76 | 24.3 |
| CDY21844 | Canola | nucleus | 27.4 | 24.29 |
| CDY40970 | Canola | nucleus | 27.76 | 24.22 |
| CDY53806 | Canola | nucleus | 27.4 | 24.21 |
| CDY11662 | Canola | nucleus | 28.83 | 24.18 |
| CDY20109 | Canola | nucleus | 27.05 | 23.97 |
| CDY50880 | Canola | nucleus | 27.4 | 23.69 |
| CDY65270 | Canola | nucleus | 33.1 | 23.54 |
| CDX98560 | Canola | nucleus | 26.69 | 23.44 |
| CDX97674 | Canola | nucleus | 26.69 | 23.36 |
| CDX97675 | Canola | nucleus | 28.11 | 23.03 |
| CDY09368 | Canola | nucleus | 33.1 | 22.91 |
| CDY17437 | Canola | nucleus | 33.1 | 22.91 |
| CDY15835 | Canola | nucleus | 33.1 | 22.85 |
| CDY46433 | Canola | nucleus | 33.45 | 22.82 |
| CDY56427 | Canola | nucleus | 26.33 | 22.63 |
| CDY04129 | Canola | nucleus | 32.74 | 22.55 |
| CDY03050 | Canola | nucleus | 33.1 | 22.46 |
| CDY23551 | Canola | nucleus | 29.54 | 22.13 |
| CDY17595 | Canola | nucleus | 32.74 | 22.06 |
| CDX98562 | Canola | nucleus | 28.11 | 22.01 |
| CDY20131 | Canola | nucleus | 27.05 | 21.71 |
| CDY01755 | Canola | nucleus | 30.25 | 21.41 |
| CDY29983 | Canola | nucleus | 27.05 | 21.41 |
| CDX95910 | Canola | nucleus | 29.54 | 20.29 |
| CDY42810 | Canola | nucleus | 29.54 | 16.27 |
| CDX83510 | Canola | nucleus | 29.18 | 16.08 |
| CDY54324 | Canola | extracellular | 6.05 | 6.14 |
| CDY16201 | Canola | plastid | 5.69 | 6.08 |
| CDX82429 | Canola | plastid | 1.07 | 2.8 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078HNP9 | UniProt:A0A078HNP9 | EnsemblPlants:CDY39487 | ProteinID:CDY39487 |
| ProteinID:CDY39487.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00067987001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF2 | SUPFAM:SSF101941 | UniParc:UPI0004EB9767 | : | : | : |
Description
BnaC03g60970DBnaC03g60970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNP9]
Coordinates
chrLK032448:+:311371..312671
Molecular Weight (calculated)
32354.0 Da
IEP (calculated)
8.435
GRAVY (calculated)
-0.583
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKEIELPGF RFHPTEEELL NYYLKNMVYG NISKVEVIGF LNIYRHDPWD LPHLSTIGER EWYFFVPRER KHGNGGRPSR TTEKGYWKAT GSDRKIISLS
101: EPKRMIGLKK TLVFYSGRAP GGSKTDWVMN EFRMPDNFTL PKDVVLCKVY RKATSLKVLE QRAEMGAKMN QTCPNSPLSS SDTISFVGKE EDMMMTSFPF
201: PQEAAMKEAN NNNFMLQGHT EEKQRETEMK EPSSSLKLPC GVLPLPELQL PKQGFEWGQD QFLSISPWLQ NLTPIVNLLN F
101: EPKRMIGLKK TLVFYSGRAP GGSKTDWVMN EFRMPDNFTL PKDVVLCKVY RKATSLKVLE QRAEMGAKMN QTCPNSPLSS SDTISFVGKE EDMMMTSFPF
201: PQEAAMKEAN NNNFMLQGHT EEKQRETEMK EPSSSLKLPC GVLPLPELQL PKQGFEWGQD QFLSISPWLQ NLTPIVNLLN F
001: MGKDIELPGF RFHPTEEELL DFYLKNMVYG KRSSVEVIGF LNIYRHDPWD LPGLSRIGER EWYFFVPRER KHGNGGRPSR TTEKGYWKAT GSDRKIISLS
101: EPKRVIGLKK TLVFYRGRAP GGSKTDWVMN EFRMPDNCSL PKDVVLCKIY RKATSLKVLE QRAEMEAKMN QTCPNSPLSS SETISFVGKE ENMMTSFRAP
201: QVIAMEEANK IQMHQENAKT EEKQREAETK EPSSSLKLPF GSLPELQLPK PGVEWDQLLS ISPWLQNLTP IVNIYW
101: EPKRVIGLKK TLVFYRGRAP GGSKTDWVMN EFRMPDNCSL PKDVVLCKIY RKATSLKVLE QRAEMEAKMN QTCPNSPLSS SETISFVGKE ENMMTSFRAP
201: QVIAMEEANK IQMHQENAKT EEKQREAETK EPSSSLKLPF GSLPELQLPK PGVEWDQLLS ISPWLQNLTP IVNIYW
Arabidopsis Description
anac036NAC domain containing protein 36 [Source:UniProtKB/TrEMBL;Acc:F4IME8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.