Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018997.1-P | Field mustard | nucleus | 100.0 | 97.25 |
| CDY69545 | Canola | nucleus | 92.14 | 93.91 |
| CDX82430 | Canola | nucleus | 49.06 | 78.39 |
| CDY22671 | Canola | nucleus | 48.11 | 76.88 |
| CDY26031 | Canola | cytosol | 30.82 | 64.9 |
| AT1G52880.1 | Thale cress | nucleus | 63.84 | 63.44 |
| CDY56427 | Canola | nucleus | 63.21 | 61.47 |
| CDY26032 | Canola | cytosol | 30.5 | 60.25 |
| CDX97675 | Canola | nucleus | 64.15 | 59.48 |
| CDY20131 | Canola | nucleus | 63.84 | 58.0 |
| CDX98562 | Canola | nucleus | 63.21 | 55.99 |
| VIT_19s0014g03300.t01 | Wine grape | nucleus | 60.06 | 54.11 |
| CDY12886 | Canola | nucleus | 50.0 | 49.53 |
| CDY40970 | Canola | nucleus | 50.0 | 49.38 |
| KRH22138 | Soybean | nucleus | 57.55 | 48.8 |
| KRH27199 | Soybean | nucleus | 56.29 | 47.73 |
| PGSC0003DMT400064428 | Potato | nucleus | 52.52 | 47.58 |
| Solyc10g006880.2.1 | Tomato | nucleus | 52.83 | 47.32 |
| CDX82432 | Canola | nucleus | 35.53 | 45.75 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 46.23 | 45.09 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 36.48 | 44.96 |
| CDY41537 | Canola | nucleus | 35.22 | 44.8 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 36.48 | 44.27 |
| CDY40894 | Canola | nucleus | 36.16 | 44.23 |
| CDX90054 | Canola | nucleus | 39.62 | 44.21 |
| CDY40930 | Canola | cytosol | 37.42 | 44.07 |
| CDX95931 | Canola | cytosol | 37.42 | 44.07 |
| CDX84443 | Canola | nucleus | 34.91 | 44.05 |
| CDY15158 | Canola | nucleus | 39.31 | 43.71 |
| CDY07348 | Canola | nucleus | 37.11 | 43.54 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 35.85 | 43.51 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 35.53 | 43.46 |
| CDY51500 | Canola | nucleus | 37.11 | 43.38 |
| CDY21567 | Canola | nucleus | 37.11 | 42.45 |
| CDY31350 | Canola | nucleus | 35.22 | 42.26 |
| CDX69919 | Canola | nucleus | 36.79 | 42.09 |
| CDY42902 | Canola | nucleus | 36.79 | 41.79 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 47.17 | 41.78 |
| CDX81120 | Canola | nucleus | 30.82 | 40.66 |
| CDX89253 | Canola | nucleus | 38.05 | 40.33 |
| CDY29836 | Canola | nucleus | 37.42 | 39.67 |
| CDY29303 | Canola | nucleus | 37.42 | 39.67 |
| CDX92828 | Canola | nucleus | 37.42 | 39.67 |
| TraesCS2D01G214100.1 | Wheat | nucleus | 48.74 | 38.85 |
| OQU90111 | Sorghum | nucleus | 50.94 | 38.76 |
| CDX75833 | Canola | nucleus | 35.85 | 38.38 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 48.74 | 38.27 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 48.74 | 38.18 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 48.74 | 38.08 |
| Zm00001d021818_P002 | Maize | nucleus | 49.69 | 37.71 |
| CDY50880 | Canola | nucleus | 38.36 | 37.54 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 48.43 | 37.47 |
| CDX84050 | Canola | nucleus | 22.64 | 37.31 |
| CDX98560 | Canola | nucleus | 37.42 | 37.19 |
| CDY39846 | Canola | mitochondrion | 34.28 | 37.07 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 48.11 | 36.78 |
| Os07t0566500-01 | Rice | nucleus | 49.06 | 36.71 |
| CDY21844 | Canola | nucleus | 36.48 | 36.59 |
| CDX97674 | Canola | nucleus | 36.79 | 36.45 |
| CDY29983 | Canola | nucleus | 40.57 | 36.34 |
| CDY20109 | Canola | nucleus | 36.16 | 36.28 |
| HORVU6Hr1G019380.2 | Barley | plastid | 46.54 | 36.1 |
| CDY55499 | Canola | nucleus | 28.3 | 32.26 |
| CDY53654 | Canola | nucleus | 28.3 | 32.26 |
| CDY30373 | Canola | nucleus | 27.36 | 31.41 |
| CDY14865 | Canola | nucleus | 27.36 | 31.41 |
| CDX82429 | Canola | plastid | 10.38 | 30.84 |
| CDY64562 | Canola | nucleus | 27.04 | 29.25 |
| CDY43391 | Canola | nucleus | 27.04 | 29.15 |
| CDY11662 | Canola | nucleus | 30.5 | 28.96 |
| CDY24238 | Canola | nucleus | 27.67 | 28.66 |
| CDX82569 | Canola | nucleus | 27.04 | 28.48 |
| CDY47486 | Canola | nucleus | 24.84 | 28.32 |
| CDY26794 | Canola | nucleus | 24.84 | 28.32 |
| CDY47485 | Canola | nucleus | 24.84 | 28.32 |
| CDX67438 | Canola | nucleus | 29.56 | 28.06 |
| CDY02222 | Canola | nucleus | 24.21 | 27.4 |
| CDY39487 | Canola | nucleus | 24.21 | 27.4 |
| CDY60122 | Canola | nucleus | 27.36 | 26.61 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 24.53 | 25.41 |
| CDY31385 | Canola | cytosol | 24.53 | 24.45 |
| CDY65270 | Canola | nucleus | 30.19 | 24.3 |
| CDY01755 | Canola | nucleus | 28.93 | 23.17 |
| CDY46433 | Canola | nucleus | 29.87 | 23.06 |
| CDY23551 | Canola | nucleus | 26.73 | 22.67 |
| CDX95910 | Canola | nucleus | 28.3 | 22.0 |
| CDY09368 | Canola | nucleus | 27.99 | 21.92 |
| CDY15835 | Canola | nucleus | 27.99 | 21.87 |
| CDY17437 | Canola | nucleus | 27.67 | 21.67 |
| CDY04129 | Canola | nucleus | 27.67 | 21.57 |
| CDY03050 | Canola | nucleus | 27.67 | 21.26 |
| CDY17595 | Canola | nucleus | 27.67 | 21.1 |
| CDY42810 | Canola | nucleus | 27.99 | 17.45 |
| CDX83510 | Canola | nucleus | 27.67 | 17.25 |
| CDY54324 | Canola | extracellular | 5.03 | 5.78 |
| CDY16201 | Canola | plastid | 4.09 | 4.94 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078IV55 | UniProt:A0A078IV55 | EnsemblPlants:CDY53806 | ProteinID:CDY53806 |
| ProteinID:CDY53806.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00011481001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45430 |
| SUPFAM:SSF101941 | UniParc:UPI0004EEBA02 | SEG:seg | : | : | : |
Description
BnaA06g01770DBnaA06g01770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IV55]
Coordinates
chrLK033239:-:32939..34427
Molecular Weight (calculated)
35762.8 Da
IEP (calculated)
7.366
GRAVY (calculated)
-0.808
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVMETTDSS GGPPPQPNLP PGFRFHPTDE ELVIHYLKRK ADSSPLPVAI IADVDLYKHD PWELPEKALF GEQEWYFFSP RDRKYPNGAR PNRAATSGYW
101: KATGTDKPVI STGDGNKKVG VKKALVFYTG KPPKGIKSDW IMHEYRLADN KPSLRCDFGH KKNSLRLDDW VLCRIYKKNN STSSRHHHHH HLDNDKDHHH
201: HFHHDMMRDD DLYRLPLMNI FPAVFSDNND PAAIYDGGGG GAGYSMNHDF ASSSGLNQKP NIPMPFWDQD PAKRFNGGVG DCSDMVSSVA APSSMQQQGG
301: VLGDGLDRTS YHLTGLNW
101: KATGTDKPVI STGDGNKKVG VKKALVFYTG KPPKGIKSDW IMHEYRLADN KPSLRCDFGH KKNSLRLDDW VLCRIYKKNN STSSRHHHHH HLDNDKDHHH
201: HFHHDMMRDD DLYRLPLMNI FPAVFSDNND PAAIYDGGGG GAGYSMNHDF ASSSGLNQKP NIPMPFWDQD PAKRFNGGVG DCSDMVSSVA APSSMQQQGG
301: VLGDGLDRTS YHLTGLNW
001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VIHYLKRKAD SVPLPVAIIA DVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVIST GGGGSKKVGV KKALVFYSGK PPKGVKSDWI MHEYRLTDNK PTHICDFGNK KNSLRLDDWV LCRIYKKNNS TASRHHHHLH HIHLDNDHHR
201: HDMMIDDDRF RHVPPGLHFP AIFSDNNDPT AIYDGGGGGY GGGSYSMNHC FASGSKQEQL FPPVMMMTSL NQDSGIGSSS SPSKRFNGGG VGDCSTSMAA
301: TPLMQNQGGI YQLPGLNWYS
101: TGTDKPVIST GGGGSKKVGV KKALVFYSGK PPKGVKSDWI MHEYRLTDNK PTHICDFGNK KNSLRLDDWV LCRIYKKNNS TASRHHHHLH HIHLDNDHHR
201: HDMMIDDDRF RHVPPGLHFP AIFSDNNDPT AIYDGGGGGY GGGSYSMNHC FASGSKQEQL FPPVMMMTSL NQDSGIGSSS SPSKRFNGGG VGDCSTSMAA
301: TPLMQNQGGI YQLPGLNWYS
Arabidopsis Description
NAC018NARS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W6K4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.