Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98560 | Canola | nucleus | 98.44 | 98.75 |
| Bra027238.1-P | Field mustard | nucleus | 100.0 | 96.4 |
| CDY26031 | Canola | cytosol | 43.61 | 92.72 |
| CDX82432 | Canola | nucleus | 67.6 | 87.85 |
| CDY26032 | Canola | cytosol | 43.61 | 86.96 |
| AT3G15500.1 | Thale cress | nucleus | 84.11 | 85.17 |
| CDY20109 | Canola | nucleus | 82.55 | 83.6 |
| CDX75833 | Canola | nucleus | 76.95 | 83.17 |
| CDY21844 | Canola | nucleus | 81.93 | 82.97 |
| CDY29836 | Canola | nucleus | 54.83 | 58.67 |
| CDY29303 | Canola | nucleus | 54.83 | 58.67 |
| CDX92828 | Canola | nucleus | 54.83 | 58.67 |
| CDX89253 | Canola | nucleus | 54.21 | 58.0 |
| VIT_19s0014g03290.t01 | Wine grape | nucleus | 58.57 | 56.46 |
| KRH22137 | Soybean | nucleus | 59.81 | 55.98 |
| KRH27201 | Soybean | nucleus | 58.88 | 54.78 |
| CDX82430 | Canola | nucleus | 33.96 | 54.77 |
| CDY22671 | Canola | nucleus | 33.64 | 54.27 |
| Solyc12g013620.1.1 | Tomato | nucleus | 54.83 | 50.43 |
| PGSC0003DMT400039670 | Potato | nucleus | 54.52 | 49.86 |
| CDY41537 | Canola | nucleus | 34.89 | 44.8 |
| CDX84443 | Canola | nucleus | 34.58 | 44.05 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 35.2 | 43.8 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 35.51 | 43.51 |
| CDY40894 | Canola | nucleus | 34.89 | 43.08 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 34.58 | 42.69 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 34.58 | 42.37 |
| CDX90054 | Canola | nucleus | 37.38 | 42.11 |
| CDX81120 | Canola | nucleus | 31.46 | 41.91 |
| CDY31350 | Canola | nucleus | 34.58 | 41.89 |
| CDY15158 | Canola | nucleus | 37.07 | 41.61 |
| CDX69919 | Canola | nucleus | 35.2 | 40.65 |
| CDY42902 | Canola | nucleus | 35.2 | 40.36 |
| CDY21567 | Canola | nucleus | 34.89 | 40.29 |
| CDY40930 | Canola | cytosol | 33.02 | 39.26 |
| CDX95931 | Canola | cytosol | 33.02 | 39.26 |
| CDY07348 | Canola | nucleus | 32.4 | 38.38 |
| CDY51500 | Canola | nucleus | 32.4 | 38.24 |
| CDY69545 | Canola | nucleus | 37.07 | 38.14 |
| CDY12886 | Canola | nucleus | 38.01 | 38.01 |
| CDY40970 | Canola | nucleus | 38.01 | 37.89 |
| CDY39846 | Canola | mitochondrion | 34.58 | 37.76 |
| CDY53806 | Canola | nucleus | 36.45 | 36.79 |
| CDY50880 | Canola | nucleus | 37.07 | 36.62 |
| CDX84050 | Canola | nucleus | 21.81 | 36.27 |
| CDY56427 | Canola | nucleus | 36.76 | 36.09 |
| CDX97675 | Canola | nucleus | 37.07 | 34.69 |
| CDY20131 | Canola | nucleus | 37.38 | 34.29 |
| CDY29983 | Canola | nucleus | 36.76 | 33.24 |
| CDX98562 | Canola | nucleus | 36.76 | 32.87 |
| CDY14865 | Canola | nucleus | 28.35 | 32.85 |
| CDY30373 | Canola | nucleus | 28.04 | 32.49 |
| CDY55499 | Canola | nucleus | 27.1 | 31.18 |
| CDY53654 | Canola | nucleus | 27.1 | 31.18 |
| CDY64562 | Canola | nucleus | 26.17 | 28.57 |
| CDY47485 | Canola | nucleus | 24.61 | 28.32 |
| CDY47486 | Canola | nucleus | 24.61 | 28.32 |
| CDY26794 | Canola | nucleus | 24.61 | 28.32 |
| CDY43391 | Canola | nucleus | 25.86 | 28.14 |
| CDX67438 | Canola | nucleus | 28.97 | 27.76 |
| CDY24238 | Canola | nucleus | 26.48 | 27.69 |
| CDX82569 | Canola | nucleus | 25.86 | 27.48 |
| CDY11662 | Canola | nucleus | 28.66 | 27.46 |
| CDY39487 | Canola | nucleus | 23.36 | 26.69 |
| CDY60122 | Canola | nucleus | 27.1 | 26.61 |
| CDY02222 | Canola | nucleus | 23.05 | 26.33 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 24.3 | 25.41 |
| CDY65270 | Canola | nucleus | 30.53 | 24.81 |
| CDY31385 | Canola | cytosol | 24.3 | 24.45 |
| CDY46433 | Canola | nucleus | 30.53 | 23.79 |
| CDY23551 | Canola | nucleus | 26.79 | 22.93 |
| CDY17437 | Canola | nucleus | 28.97 | 22.91 |
| CDY01755 | Canola | nucleus | 28.04 | 22.67 |
| CDY15835 | Canola | nucleus | 28.66 | 22.6 |
| CDY04129 | Canola | nucleus | 28.66 | 22.55 |
| CDX95910 | Canola | nucleus | 28.66 | 22.49 |
| CDY09368 | Canola | nucleus | 28.35 | 22.41 |
| CDY03050 | Canola | nucleus | 28.35 | 21.98 |
| CDY17595 | Canola | nucleus | 28.35 | 21.82 |
| CDY42810 | Canola | nucleus | 27.41 | 17.25 |
| CDX83510 | Canola | nucleus | 27.41 | 17.25 |
| CDX82429 | Canola | plastid | 2.18 | 6.54 |
| CDY54324 | Canola | extracellular | 5.61 | 6.5 |
| CDY16201 | Canola | plastid | 4.98 | 6.08 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078EAA9 | EnsemblPlants:CDX97674 | ProteinID:CDX97674 | ProteinID:CDX97674.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00104909001 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44908 | SUPFAM:SSF101941 |
| UniParc:UPI0004EDE23E | SEG:seg | : | : | : | : |
Description
BnaA05g24050D
Coordinates
chrLK031900:+:882770..884137
Molecular Weight (calculated)
36088.0 Da
IEP (calculated)
8.179
GRAVY (calculated)
-0.706
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIQELDPLA QLSLPPGFRF YPTDEELMVD YLCRKAAGHD FSLQLIAEID LYKFDAWVLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKVISTEGRR VGIKKALVFY VGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQSSAQKQA YGNLMTSASE YSNNGSSTST SSHQYDDVLE
201: SLHEIDNRSL GYAAGSSHTI PHYNRRPGLT EQKTGFLDLA REQSYNWTNF GGHNSVQELG RNLNVPSLRY GDGDDKTQQQ QAEGIPQFNN SGVLAHDQSF
301: SVDPVNGFGY SGQQPSGFGF M
101: DKVISTEGRR VGIKKALVFY VGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQSSAQKQA YGNLMTSASE YSNNGSSTST SSHQYDDVLE
201: SLHEIDNRSL GYAAGSSHTI PHYNRRPGLT EQKTGFLDLA REQSYNWTNF GGHNSVQELG RNLNVPSLRY GDGDDKTQQQ QAEGIPQFNN SGVLAHDQSF
301: SVDPVNGFGY SGQQPSGFGF M
001: MGLQELDPLA QLSLPPGFRF YPTDEELMVE YLCRKAAGHD FSLQLIAEID LYKFDPWVLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE
201: SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP
301: VNGFGYSGQQ SSGFGFI
101: DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE
201: SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP
301: VNGFGYSGQQ SSGFGFI
Arabidopsis Description
NAC055NAC3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.