Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97675 | Canola | nucleus | 89.97 | 94.17 |
| Bra027237.1-P | Field mustard | nucleus | 91.92 | 94.02 |
| CDX82430 | Canola | nucleus | 49.03 | 88.44 |
| CDY22671 | Canola | nucleus | 48.75 | 87.94 |
| AT3G15510.1 | Thale cress | nucleus | 87.47 | 86.26 |
| CDY56427 | Canola | nucleus | 77.72 | 85.32 |
| CDY20131 | Canola | nucleus | 81.06 | 83.14 |
| CDX82429 | Canola | plastid | 23.4 | 78.5 |
| CDY69545 | Canola | nucleus | 57.1 | 65.71 |
| CDY26031 | Canola | cytosol | 27.3 | 64.9 |
| CDY53806 | Canola | nucleus | 55.99 | 63.21 |
| CDY26032 | Canola | cytosol | 27.02 | 60.25 |
| VIT_19s0014g03300.t01 | Wine grape | nucleus | 58.22 | 59.21 |
| KRH22138 | Soybean | nucleus | 58.5 | 56.0 |
| KRH27199 | Soybean | nucleus | 57.38 | 54.93 |
| PGSC0003DMT400064428 | Potato | nucleus | 50.7 | 51.85 |
| CDY12886 | Canola | nucleus | 45.68 | 51.09 |
| CDY40970 | Canola | nucleus | 45.68 | 50.93 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 45.4 | 50.0 |
| Solyc10g006880.2.1 | Tomato | nucleus | 49.3 | 49.86 |
| CDX82432 | Canola | nucleus | 32.59 | 47.37 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 32.31 | 44.96 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 32.59 | 44.66 |
| CDY41537 | Canola | nucleus | 30.92 | 44.4 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 32.31 | 44.27 |
| CDY40930 | Canola | cytosol | 33.15 | 44.07 |
| CDX95931 | Canola | cytosol | 33.15 | 44.07 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 44.01 | 44.01 |
| CDX90054 | Canola | nucleus | 34.82 | 43.86 |
| CDX84443 | Canola | nucleus | 30.64 | 43.65 |
| CDY07348 | Canola | nucleus | 32.87 | 43.54 |
| CDY51500 | Canola | nucleus | 32.87 | 43.38 |
| CDY15158 | Canola | nucleus | 34.54 | 43.36 |
| CDY40894 | Canola | nucleus | 31.2 | 43.08 |
| TraesCS2D01G214100.1 | Wheat | nucleus | 47.08 | 42.36 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 30.64 | 42.31 |
| CDY31350 | Canola | nucleus | 31.2 | 42.26 |
| CDY42902 | Canola | nucleus | 32.87 | 42.14 |
| CDY21567 | Canola | nucleus | 32.59 | 42.09 |
| CDX69919 | Canola | nucleus | 32.59 | 42.09 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 47.35 | 41.98 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 47.35 | 41.77 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 47.08 | 41.63 |
| CDX81120 | Canola | nucleus | 27.58 | 41.08 |
| OQU90111 | Sorghum | nucleus | 47.35 | 40.67 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 46.52 | 40.63 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 46.8 | 40.38 |
| Zm00001d021818_P002 | Maize | nucleus | 46.8 | 40.1 |
| HORVU6Hr1G019380.2 | Barley | plastid | 45.68 | 40.0 |
| Os07t0566500-01 | Rice | nucleus | 47.08 | 39.76 |
| CDX75833 | Canola | nucleus | 32.87 | 39.73 |
| CDY50880 | Canola | nucleus | 35.1 | 38.77 |
| CDY29836 | Canola | nucleus | 32.03 | 38.33 |
| CDX89253 | Canola | nucleus | 32.03 | 38.33 |
| CDY29303 | Canola | nucleus | 31.75 | 38.0 |
| CDX92828 | Canola | nucleus | 31.75 | 38.0 |
| CDY29983 | Canola | nucleus | 37.33 | 37.75 |
| CDX98560 | Canola | nucleus | 33.15 | 37.19 |
| CDY39846 | Canola | mitochondrion | 30.36 | 37.07 |
| CDY21844 | Canola | nucleus | 32.59 | 36.91 |
| CDX97674 | Canola | nucleus | 32.87 | 36.76 |
| CDY20109 | Canola | nucleus | 32.31 | 36.59 |
| CDX84050 | Canola | nucleus | 19.22 | 35.75 |
| CDY55499 | Canola | nucleus | 23.96 | 30.82 |
| CDY14865 | Canola | nucleus | 23.68 | 30.69 |
| CDY30373 | Canola | nucleus | 23.68 | 30.69 |
| CDY53654 | Canola | nucleus | 23.68 | 30.47 |
| CDY47486 | Canola | nucleus | 22.84 | 29.39 |
| CDY47485 | Canola | nucleus | 22.84 | 29.39 |
| CDY26794 | Canola | nucleus | 22.84 | 29.39 |
| CDY39487 | Canola | nucleus | 22.01 | 28.11 |
| CDY02222 | Canola | nucleus | 22.01 | 28.11 |
| CDY43391 | Canola | nucleus | 22.84 | 27.8 |
| CDY11662 | Canola | nucleus | 25.91 | 27.76 |
| CDY24238 | Canola | nucleus | 23.68 | 27.69 |
| CDY64562 | Canola | nucleus | 22.56 | 27.55 |
| CDX67438 | Canola | nucleus | 25.07 | 26.87 |
| CDX82569 | Canola | nucleus | 22.28 | 26.49 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 22.28 | 26.06 |
| CDY60122 | Canola | nucleus | 23.4 | 25.69 |
| CDY31385 | Canola | cytosol | 22.28 | 25.08 |
| CDY65270 | Canola | nucleus | 25.63 | 23.29 |
| CDY46433 | Canola | nucleus | 25.91 | 22.57 |
| CDY01755 | Canola | nucleus | 24.79 | 22.42 |
| CDY23551 | Canola | nucleus | 23.12 | 22.13 |
| CDY09368 | Canola | nucleus | 24.51 | 21.67 |
| CDY17437 | Canola | nucleus | 24.51 | 21.67 |
| CDY15835 | Canola | nucleus | 24.51 | 21.62 |
| CDY04129 | Canola | nucleus | 24.23 | 21.32 |
| CDX95910 | Canola | nucleus | 23.96 | 21.03 |
| CDY03050 | Canola | nucleus | 24.23 | 21.01 |
| CDY17595 | Canola | nucleus | 24.23 | 20.86 |
| CDY42810 | Canola | nucleus | 23.68 | 16.67 |
| CDX83510 | Canola | nucleus | 23.68 | 16.67 |
| CDY54324 | Canola | extracellular | 4.46 | 5.78 |
| CDY16201 | Canola | plastid | 3.9 | 5.32 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078EC40 | EnsemblPlants:CDX98562 | ProteinID:CDX98562 | ProteinID:CDX98562.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00106219001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45430 |
| PANTHER:PTHR45430:SF1 | SUPFAM:SSF101941 | UniParc:UPI0004EE453E | SEG:seg | : | : |
Description
BnaC05g38130D
Coordinates
chrLK031905:+:1041648..1043515
Molecular Weight (calculated)
39294.3 Da
IEP (calculated)
7.613
GRAVY (calculated)
-0.591
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTDSPGGP PPPPQPNLPP GFRFHPTDEE LVVHYLKPKA ASAPLPVAII AEVNLYKFDP WELPAKASFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK
101: ATGTDKPVLA SDGNQKVGVK KALVFYRGKP PKGIKSDWIM HEYRLIDNKP NNRPPGCDFG NTKNSLRLDD WVLCRIYKKN NAGRHVDNDK DHDMIDYIFR
201: KIPPSLSMAA ATTGLHHNVS RSMNFFPGGY GIFSDGDHGL YNGSGMINNN IAVCSNVAGP VNSDPNAVGN CLNPASSSGP MMMANLKRAL PVPFWPAAEE
301: EHDVSPSKRF HGGAGGGDCS NMSSSMMEET PPLMQQQGGV LGDELTTSYQ LPGLNWYAS
101: ATGTDKPVLA SDGNQKVGVK KALVFYRGKP PKGIKSDWIM HEYRLIDNKP NNRPPGCDFG NTKNSLRLDD WVLCRIYKKN NAGRHVDNDK DHDMIDYIFR
201: KIPPSLSMAA ATTGLHHNVS RSMNFFPGGY GIFSDGDHGL YNGSGMINNN IAVCSNVAGP VNSDPNAVGN CLNPASSSGP MMMANLKRAL PVPFWPAAEE
301: EHDVSPSKRF HGGAGGGDCS NMSSSMMEET PPLMQQQGGV LGDELTTSYQ LPGLNWYAS
001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VVHYLKRKAA SAPLPVAIIA EVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS
Arabidopsis Description
NAC056NAC transcription factor 56 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.