Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97675 | Canola | nucleus | 86.81 | 92.13 |
| Bra027237.1-P | Field mustard | nucleus | 88.46 | 91.74 |
| CDX82430 | Canola | nucleus | 48.9 | 89.45 |
| CDY22671 | Canola | nucleus | 48.35 | 88.44 |
| CDX98562 | Canola | nucleus | 86.26 | 87.47 |
| CDY56427 | Canola | nucleus | 78.57 | 87.46 |
| Bra001597.1-P | Field mustard | nucleus | 82.14 | 85.43 |
| CDY20131 | Canola | nucleus | 81.04 | 84.29 |
| Bra021114.1-P | Field mustard | nucleus | 82.42 | 83.8 |
| AT1G52880.1 | Thale cress | nucleus | 57.14 | 65.0 |
| VIT_19s0014g03300.t01 | Wine grape | nucleus | 59.62 | 61.47 |
| KRH22138 | Soybean | nucleus | 58.24 | 56.53 |
| PGSC0003DMT400064428 | Potato | nucleus | 53.3 | 55.27 |
| KRH27199 | Soybean | nucleus | 56.87 | 55.2 |
| Solyc10g006880.2.1 | Tomato | nucleus | 52.2 | 53.52 |
| AT1G61110.1 | Thale cress | nucleus | 46.15 | 52.01 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 44.23 | 49.39 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 31.87 | 45.85 |
| AT1G69490.1 | Thale cress | nucleus | 32.97 | 44.78 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 43.68 | 44.29 |
| AT1G01720.1 | Thale cress | nucleus | 34.89 | 43.94 |
| TraesCS2D01G214100.1 | Wheat | nucleus | 47.25 | 43.11 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 47.53 | 42.72 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 47.53 | 42.51 |
| AT5G08790.1 | Thale cress | nucleus | 32.69 | 42.05 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 46.7 | 41.87 |
| OQU90111 | Sorghum | nucleus | 47.53 | 41.39 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 46.7 | 41.36 |
| HORVU6Hr1G019380.2 | Barley | plastid | 46.15 | 40.98 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 46.7 | 40.87 |
| Zm00001d021818_P002 | Maize | nucleus | 46.98 | 40.81 |
| Os07t0566500-01 | Rice | nucleus | 47.25 | 40.47 |
| AT3G15500.1 | Thale cress | nucleus | 33.52 | 38.49 |
| AT1G52890.1 | Thale cress | nucleus | 33.52 | 38.49 |
| AT4G27410.3 | Thale cress | nucleus | 32.42 | 37.58 |
| AT3G04070.1 | Thale cress | nucleus | 36.81 | 37.33 |
| AT5G63790.2 | Thale cress | cytosol | 32.14 | 36.34 |
| AT2G43000.1 | Thale cress | nucleus | 23.35 | 30.91 |
| AT2G17040.1 | Thale cress | nucleus | 22.25 | 29.35 |
| AT5G39820.1 | Thale cress | nucleus | 26.1 | 28.19 |
| AT3G12910.1 | Thale cress | nucleus | 23.08 | 27.72 |
| AT1G26870.1 | Thale cress | nucleus | 26.37 | 22.97 |
| AT2G02450.2 | Thale cress | nucleus | 23.9 | 21.01 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:820790 | ProteinID:AAF35417.1 | EMBL:AB049071 | ProteinID:AEE75684.1 |
| ArrayExpress:AT3G15510 | EnsemblPlantsGene:AT3G15510 | RefSeq:AT3G15510 | TAIR:AT3G15510 | RefSeq:AT3G15510-TAIR-G | EnsemblPlants:AT3G15510.1 |
| TAIR:AT3G15510.1 | Symbol:ATNAC2 | ProteinID:BAB02380.1 | EMBL:BT004079 | EMBL:BT005044 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009719 |
| GO:GO:0009753 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0044212 |
| GO:GO:0045995 | GO:GO:0048317 | GO:GO:0080060 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | RefSeq:NP_188170.1 | PFAM:PF02365 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51005 | PANTHER:PTHR45430 | UniProt:Q9LD44 |
| SUPFAM:SSF101941 | UniParc:UPI000000C26B | SEG:seg | : | : | : |
Description
NAC056NAC transcription factor 56 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD44]
Coordinates
chr3:+:5243432..5245510
Molecular Weight (calculated)
40029.0 Da
IEP (calculated)
7.745
GRAVY (calculated)
-0.668
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VVHYLKRKAA SAPLPVAIIA EVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.