Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20131 | Canola | nucleus | 95.11 | 88.86 |
| CDX82430 | Canola | nucleus | 53.52 | 87.94 |
| CDY22671 | Canola | nucleus | 52.91 | 86.93 |
| Bra021114.1-P | Field mustard | nucleus | 95.11 | 86.87 |
| CDX97675 | Canola | nucleus | 85.63 | 81.63 |
| AT3G15510.1 | Thale cress | nucleus | 87.46 | 78.57 |
| CDX98562 | Canola | nucleus | 85.32 | 77.72 |
| CDY26031 | Canola | cytosol | 30.28 | 65.56 |
| CDY69545 | Canola | nucleus | 62.08 | 65.06 |
| CDY53806 | Canola | nucleus | 61.47 | 63.21 |
| CDY26032 | Canola | cytosol | 29.97 | 60.87 |
| CDX82429 | Canola | plastid | 19.57 | 59.81 |
| VIT_19s0014g03300.t01 | Wine grape | nucleus | 60.55 | 56.09 |
| KRH22138 | Soybean | nucleus | 61.16 | 53.33 |
| PGSC0003DMT400064428 | Potato | nucleus | 57.19 | 53.28 |
| KRH27199 | Soybean | nucleus | 59.63 | 52.0 |
| Solyc10g006880.2.1 | Tomato | nucleus | 56.27 | 51.83 |
| CDY12886 | Canola | nucleus | 50.46 | 51.4 |
| CDY40970 | Canola | nucleus | 50.46 | 51.24 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 49.85 | 50.0 |
| CDX82432 | Canola | nucleus | 35.78 | 47.37 |
| CDY41537 | Canola | nucleus | 34.86 | 45.6 |
| CDY40930 | Canola | cytosol | 36.7 | 44.44 |
| CDX84443 | Canola | nucleus | 34.25 | 44.44 |
| CDX95931 | Canola | cytosol | 36.7 | 44.44 |
| CDY07348 | Canola | nucleus | 36.39 | 43.91 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 34.56 | 43.8 |
| CDY51500 | Canola | nucleus | 36.39 | 43.75 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 48.01 | 43.73 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 34.56 | 43.13 |
| CDY40894 | Canola | nucleus | 34.25 | 43.08 |
| CDY31350 | Canola | nucleus | 34.86 | 43.02 |
| CDY42902 | Canola | nucleus | 36.7 | 42.86 |
| CDX90054 | Canola | nucleus | 37.0 | 42.46 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 33.95 | 42.37 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 33.64 | 42.31 |
| CDY15158 | Canola | nucleus | 36.7 | 41.96 |
| CDY21567 | Canola | nucleus | 35.47 | 41.73 |
| CDX69919 | Canola | nucleus | 35.47 | 41.73 |
| TraesCS2D01G214100.1 | Wheat | nucleus | 49.85 | 40.85 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 50.15 | 40.49 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 50.15 | 40.29 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 49.85 | 40.15 |
| CDX75833 | Canola | nucleus | 36.09 | 39.73 |
| OQU90111 | Sorghum | nucleus | 50.46 | 39.47 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 49.54 | 39.42 |
| Zm00001d021818_P002 | Maize | nucleus | 50.15 | 39.14 |
| CDX81120 | Canola | nucleus | 28.75 | 39.0 |
| CDY29836 | Canola | nucleus | 35.78 | 39.0 |
| CDX92828 | Canola | nucleus | 35.78 | 39.0 |
| CDX89253 | Canola | nucleus | 35.78 | 39.0 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 49.54 | 38.94 |
| HORVU6Hr1G019380.2 | Barley | plastid | 48.62 | 38.78 |
| CDY29303 | Canola | nucleus | 35.47 | 38.67 |
| CDY50880 | Canola | nucleus | 37.92 | 38.15 |
| Os07t0566500-01 | Rice | nucleus | 49.24 | 37.88 |
| CDY39846 | Canola | mitochondrion | 33.95 | 37.76 |
| CDX98560 | Canola | nucleus | 36.39 | 37.19 |
| CDY29983 | Canola | nucleus | 40.37 | 37.18 |
| CDY21844 | Canola | nucleus | 35.78 | 36.91 |
| CDX97674 | Canola | nucleus | 36.09 | 36.76 |
| CDY20109 | Canola | nucleus | 35.47 | 36.59 |
| CDX84050 | Canola | nucleus | 20.8 | 35.23 |
| CDY55499 | Canola | nucleus | 26.61 | 31.18 |
| CDY53654 | Canola | nucleus | 26.3 | 30.82 |
| CDY30373 | Canola | nucleus | 25.99 | 30.69 |
| CDY14865 | Canola | nucleus | 25.99 | 30.69 |
| CDY43391 | Canola | nucleus | 25.69 | 28.47 |
| CDY24238 | Canola | nucleus | 26.61 | 28.34 |
| CDY64562 | Canola | nucleus | 25.38 | 28.23 |
| CDY11662 | Canola | nucleus | 28.44 | 27.76 |
| CDX67438 | Canola | nucleus | 27.83 | 27.16 |
| CDX82569 | Canola | nucleus | 25.08 | 27.15 |
| CDY47485 | Canola | nucleus | 22.94 | 26.88 |
| CDY47486 | Canola | nucleus | 22.94 | 26.88 |
| CDY26794 | Canola | nucleus | 22.94 | 26.88 |
| CDY02222 | Canola | nucleus | 22.63 | 26.33 |
| CDY39487 | Canola | nucleus | 22.63 | 26.33 |
| CDY60122 | Canola | nucleus | 26.3 | 26.3 |
| CDY65270 | Canola | nucleus | 29.36 | 24.3 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 22.63 | 24.1 |
| CDY31385 | Canola | cytosol | 22.63 | 23.2 |
| CDY46433 | Canola | nucleus | 29.05 | 23.06 |
| CDY01755 | Canola | nucleus | 27.52 | 22.67 |
| CDY23551 | Canola | nucleus | 25.99 | 22.67 |
| CDY09368 | Canola | nucleus | 27.22 | 21.92 |
| CDY15835 | Canola | nucleus | 27.22 | 21.87 |
| CDY17437 | Canola | nucleus | 26.91 | 21.67 |
| CDY04129 | Canola | nucleus | 26.91 | 21.57 |
| CDX95910 | Canola | nucleus | 26.91 | 21.52 |
| CDY17595 | Canola | nucleus | 27.22 | 21.34 |
| CDY03050 | Canola | nucleus | 26.91 | 21.26 |
| CDY42810 | Canola | nucleus | 26.3 | 16.86 |
| CDX83510 | Canola | nucleus | 26.3 | 16.86 |
| CDY54324 | Canola | extracellular | 4.89 | 5.78 |
| CDY16201 | Canola | plastid | 4.28 | 5.32 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078J2L8 | UniProt:A0A078J2L8 | EnsemblPlants:CDY56427 | ProteinID:CDY56427 |
| ProteinID:CDY56427.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00019578001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45430 |
| SUPFAM:SSF101941 | UniParc:UPI0004EE5541 | SEG:seg | : | : | : |
Description
BnaCnng30350DBnaCnng30350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2L8]
Coordinates
chrLK033488:-:42620..44526
Molecular Weight (calculated)
36123.3 Da
IEP (calculated)
7.162
GRAVY (calculated)
-0.671
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VVHYLKRKAA SAPLPVSIIA DVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIDNKPN NRPPGCDYGN KKNSLRLDDW VLCRIYKKNN AGRHVDNDKD HDMIDYIFRK
201: IPSGLNHSVS RSMNFFPGRF SGGYGMFSDG DPGFYDGSGM MCSNGADAVN LNVCNGNLIA DVVADEEQEV SPSKRFHGVG GGGDCSNMSS SMVEEPPPFM
301: QQQGGVLGDG LFRTTSYQLP GLNWYSS
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIDNKPN NRPPGCDYGN KKNSLRLDDW VLCRIYKKNN AGRHVDNDKD HDMIDYIFRK
201: IPSGLNHSVS RSMNFFPGRF SGGYGMFSDG DPGFYDGSGM MCSNGADAVN LNVCNGNLIA DVVADEEQEV SPSKRFHGVG GGGDCSNMSS SMVEEPPPFM
301: QQQGGVLGDG LFRTTSYQLP GLNWYSS
001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VVHYLKRKAA SAPLPVAIIA EVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS
Arabidopsis Description
NAC056NAC transcription factor 56 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.