Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037743.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY14865 | Canola | nucleus | 97.83 | 97.83 |
| CDY55499 | Canola | nucleus | 85.2 | 84.59 |
| AT2G43000.1 | Thale cress | nucleus | 83.75 | 84.36 |
| CDY53654 | Canola | nucleus | 84.84 | 84.23 |
| CDY26031 | Canola | cytosol | 27.8 | 50.99 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 45.85 | 48.47 |
| CDY26032 | Canola | cytosol | 27.8 | 47.83 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 42.96 | 47.6 |
| CDX83510 | Canola | nucleus | 87.36 | 47.45 |
| CDY42810 | Canola | nucleus | 86.64 | 47.06 |
| KRH73618 | Soybean | cytosol | 54.15 | 46.88 |
| GSMUA_Achr10P... | Banana | cytosol | 45.13 | 46.82 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 48.01 | 46.34 |
| KRH14512 | Soybean | nucleus | 54.51 | 46.32 |
| CDY43391 | Canola | nucleus | 48.74 | 45.76 |
| Zm00001d007850_P001 | Maize | nucleus | 40.79 | 45.02 |
| CDY24238 | Canola | nucleus | 49.82 | 44.95 |
| CDY64562 | Canola | nucleus | 47.29 | 44.56 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 48.01 | 43.75 |
| CDX82569 | Canola | nucleus | 46.93 | 43.05 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 47.65 | 43.0 |
| CDX82430 | Canola | nucleus | 29.6 | 41.21 |
| Solyc07g045030.2.1 | Tomato | nucleus | 48.74 | 40.79 |
| CDY60122 | Canola | nucleus | 48.01 | 40.67 |
| CDY22671 | Canola | nucleus | 28.88 | 40.2 |
| EES17466 | Sorghum | nucleus | 42.96 | 39.14 |
| PGSC0003DMT400049124 | Potato | nucleus | 34.66 | 38.4 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 45.85 | 37.69 |
| Zm00001d031164_P001 | Maize | nucleus | 41.52 | 37.58 |
| Zm00001d013151_P001 | Maize | cytosol | 45.49 | 37.5 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 38.63 | 37.02 |
| EER95852 | Sorghum | nucleus | 45.49 | 36.73 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 44.77 | 36.15 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 44.4 | 36.07 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 45.49 | 36.0 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 45.13 | 35.61 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 45.13 | 35.51 |
| EER93360 | Sorghum | nucleus | 47.29 | 35.41 |
| Os03t0777000-01 | Rice | nucleus | 46.21 | 35.36 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 43.32 | 35.29 |
| CDY23551 | Canola | nucleus | 47.65 | 35.2 |
| Zm00001d018773_P001 | Maize | nucleus | 45.49 | 35.2 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 45.13 | 34.34 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 42.6 | 34.1 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 45.13 | 33.97 |
| CDX82432 | Canola | nucleus | 29.96 | 33.6 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 45.49 | 33.42 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 45.13 | 33.16 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 45.13 | 32.55 |
| CDY41537 | Canola | nucleus | 29.24 | 32.4 |
| CDX84443 | Canola | nucleus | 29.24 | 32.14 |
| CDY40894 | Canola | nucleus | 29.96 | 31.92 |
| CDX95931 | Canola | cytosol | 31.05 | 31.85 |
| CDY40930 | Canola | cytosol | 31.05 | 31.85 |
| CDY07348 | Canola | nucleus | 31.05 | 31.73 |
| CDX89253 | Canola | nucleus | 34.3 | 31.67 |
| CDX92828 | Canola | nucleus | 34.3 | 31.67 |
| CDY29303 | Canola | nucleus | 34.3 | 31.67 |
| CDY29836 | Canola | nucleus | 34.3 | 31.67 |
| CDY51500 | Canola | nucleus | 31.05 | 31.62 |
| CDY42902 | Canola | nucleus | 31.77 | 31.43 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 29.24 | 31.4 |
| CDX67438 | Canola | nucleus | 37.91 | 31.34 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 29.24 | 31.15 |
| CDY11662 | Canola | nucleus | 37.55 | 31.04 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 29.24 | 30.92 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 28.88 | 30.53 |
| CDY26794 | Canola | nucleus | 30.69 | 30.47 |
| CDY47486 | Canola | nucleus | 30.69 | 30.47 |
| CDX90054 | Canola | nucleus | 31.05 | 30.18 |
| CDY47485 | Canola | nucleus | 30.32 | 30.11 |
| CDY39487 | Canola | nucleus | 30.32 | 29.89 |
| CDY31350 | Canola | nucleus | 28.52 | 29.81 |
| CDY15158 | Canola | nucleus | 30.69 | 29.72 |
| CDY02222 | Canola | nucleus | 29.96 | 29.54 |
| CDX75833 | Canola | nucleus | 31.41 | 29.29 |
| CDX69919 | Canola | nucleus | 29.24 | 29.14 |
| CDY21567 | Canola | nucleus | 29.24 | 29.14 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 31.41 | 28.34 |
| CDX81120 | Canola | nucleus | 24.55 | 28.22 |
| CDX98560 | Canola | nucleus | 32.49 | 28.12 |
| CDY20109 | Canola | nucleus | 32.13 | 28.08 |
| CDY21844 | Canola | nucleus | 32.13 | 28.08 |
| CDX97674 | Canola | nucleus | 32.49 | 28.04 |
| CDY69545 | Canola | nucleus | 31.05 | 27.56 |
| CDY50880 | Canola | nucleus | 32.13 | 27.38 |
| CDY53806 | Canola | nucleus | 31.41 | 27.36 |
| CDY65270 | Canola | nucleus | 38.99 | 27.34 |
| CDY31385 | Canola | cytosol | 31.41 | 27.27 |
| CDY12886 | Canola | nucleus | 31.41 | 27.1 |
| CDY40970 | Canola | nucleus | 31.41 | 27.02 |
| CDY39846 | Canola | mitochondrion | 28.16 | 26.53 |
| CDY01755 | Canola | nucleus | 37.91 | 26.45 |
| CDY56427 | Canola | nucleus | 30.69 | 25.99 |
| CDY46433 | Canola | nucleus | 38.63 | 25.97 |
| CDX95910 | Canola | nucleus | 37.91 | 25.67 |
| CDY20131 | Canola | nucleus | 31.77 | 25.14 |
| CDX97675 | Canola | nucleus | 31.05 | 25.07 |
| CDY29983 | Canola | nucleus | 32.13 | 25.07 |
| CDX84050 | Canola | nucleus | 16.61 | 23.83 |
| CDX98562 | Canola | nucleus | 30.69 | 23.68 |
| CDY17437 | Canola | nucleus | 31.41 | 21.43 |
| CDY04129 | Canola | nucleus | 31.41 | 21.32 |
| CDY03050 | Canola | nucleus | 31.77 | 21.26 |
| CDY17595 | Canola | nucleus | 31.77 | 21.1 |
| CDY09368 | Canola | nucleus | 30.69 | 20.94 |
| CDY15835 | Canola | nucleus | 30.69 | 20.88 |
| CDY54324 | Canola | extracellular | 9.75 | 9.75 |
| CDY16201 | Canola | plastid | 7.94 | 8.37 |
| CDX82429 | Canola | plastid | 1.44 | 3.74 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078H0L4 | UniProt:A0A078H0L4 | EnsemblPlants:CDY30373 | ProteinID:CDY30373 |
| ProteinID:CDY30373.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00045062001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 |
| PANTHER:PTHR44543:SF2 | SUPFAM:SSF101941 | UniParc:UPI000189CF8D | SEG:seg | : | : |
Description
BnaA04g24740DBnaA04g24740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0L4]
Coordinates
chrLK032253:-:6365..7979
Molecular Weight (calculated)
32047.7 Da
IEP (calculated)
8.232
GRAVY (calculated)
-0.793
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGEGKDHEE EDEAKLPGFR FHPTDEELLG YYLRRKVENK PIKLELIKQI DIYKFDPWDL PRVSSVGENE WYFFCMRGRK YKNSVRPNRV TGSGFWKATG
101: IDKPVYSNLD CIGLKKSLVY YLGSAGKGSK TNWMMHEFRL PSTAKSESPT QQAEVWTLCR IFKRVTHHRN PTILQPNRRP VITLTDSCSK TSSLDSDHTS
201: HHVVESLSHK LHEPQRQPQT HNPYWNQLTT VGFNQPTYTC HDNNLVNLWN INGEDFIGNA ASWDELRSVI DGNTNHL
101: IDKPVYSNLD CIGLKKSLVY YLGSAGKGSK TNWMMHEFRL PSTAKSESPT QQAEVWTLCR IFKRVTHHRN PTILQPNRRP VITLTDSCSK TSSLDSDHTS
201: HHVVESLSHK LHEPQRQPQT HNPYWNQLTT VGFNQPTYTC HDNNLVNLWN INGEDFIGNA ASWDELRSVI DGNTNHL
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.