Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95852 | Sorghum | nucleus | 83.8 | 87.46 |
| Zm00001d007850_P001 | Maize | nucleus | 56.15 | 80.08 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 53.63 | 56.97 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 53.35 | 56.01 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 52.79 | 55.1 |
| Zm00001d013151_P001 | Maize | cytosol | 51.4 | 54.76 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 52.23 | 53.43 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 52.23 | 53.28 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 50.56 | 53.24 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 52.23 | 53.12 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 53.63 | 52.75 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 50.28 | 52.02 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 54.47 | 51.72 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 37.71 | 51.53 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 53.91 | 51.19 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 30.17 | 50.47 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 51.12 | 49.73 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 34.36 | 49.2 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 40.78 | 48.99 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 37.71 | 48.74 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 39.11 | 48.44 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 51.68 | 48.18 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 41.06 | 47.88 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 36.59 | 47.46 |
| Bra000282.1-P | Field mustard | nucleus | 35.75 | 47.06 |
| AT2G43000.1 | Thale cress | nucleus | 36.03 | 46.91 |
| KRH73618 | Soybean | cytosol | 41.62 | 46.56 |
| CDY53654 | Canola | nucleus | 35.75 | 45.88 |
| KRH14512 | Soybean | nucleus | 41.62 | 45.71 |
| CDY55499 | Canola | nucleus | 35.47 | 45.52 |
| Bra037743.1-P | Field mustard | nucleus | 35.2 | 45.49 |
| CDY30373 | Canola | nucleus | 35.2 | 45.49 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 37.43 | 45.42 |
| PGSC0003DMT400003082 | Potato | nucleus | 35.75 | 45.39 |
| Bra004736.1-P | Field mustard | nucleus | 35.47 | 45.36 |
| PGSC0003DMT400090327 | Potato | cytosol | 35.75 | 45.07 |
| KRH46012 | Soybean | nucleus | 38.27 | 45.07 |
| Solyc02g069960.2.1 | Tomato | nucleus | 38.83 | 44.84 |
| KRG98971 | Soybean | nucleus | 37.99 | 44.74 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 35.47 | 44.72 |
| CDY14865 | Canola | nucleus | 34.36 | 44.4 |
| Solyc05g021090.2.1 | Tomato | nucleus | 34.36 | 44.09 |
| CDY64562 | Canola | nucleus | 35.47 | 43.2 |
| CDX82569 | Canola | nucleus | 36.03 | 42.72 |
| CDY43391 | Canola | nucleus | 35.2 | 42.71 |
| PGSC0003DMT400054407 | Potato | nucleus | 37.43 | 42.68 |
| CDY24238 | Canola | nucleus | 36.59 | 42.67 |
| Bra039353.1-P | Field mustard | nucleus | 36.31 | 42.35 |
| AT3G12910.1 | Thale cress | nucleus | 35.75 | 42.24 |
| KRH13702 | Soybean | nucleus | 37.43 | 42.14 |
| CDY60122 | Canola | nucleus | 38.27 | 41.9 |
| Bra034719.1-P | Field mustard | nucleus | 37.99 | 41.59 |
| Zm00001d031164_P001 | Maize | nucleus | 35.47 | 41.5 |
| Solyc07g045030.2.1 | Tomato | nucleus | 37.99 | 41.09 |
| PGSC0003DMT400049124 | Potato | nucleus | 27.65 | 39.6 |
| CDY23551 | Canola | nucleus | 37.71 | 36.0 |
| Zm00001d048347_P001 | Maize | nucleus | 27.09 | 30.6 |
| Zm00001d027530_P001 | Maize | nucleus | 26.82 | 29.54 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 24.02 | 29.15 |
| Zm00001d050410_P001 | Maize | nucleus | 30.73 | 28.87 |
| Zm00001d014843_P001 | Maize | nucleus | 21.51 | 28.73 |
| Zm00001d005208_P001 | Maize | nucleus | 24.3 | 28.71 |
| Zm00001d019207_P001 | Maize | nucleus | 24.02 | 28.67 |
| Zm00001d032182_P001 | Maize | nucleus | 31.28 | 28.57 |
| Zm00001d012527_P001 | Maize | cytosol, mitochondrion, nucleus | 24.02 | 27.92 |
| Zm00001d020446_P001 | Maize | nucleus | 30.17 | 27.41 |
| Zm00001d034601_P001 | Maize | nucleus | 23.46 | 26.92 |
| Zm00001d049687_P001 | Maize | nucleus | 26.54 | 25.82 |
| Zm00001d018038_P001 | Maize | nucleus | 34.92 | 25.36 |
| Zm00001d036364_P001 | Maize | nucleus | 22.91 | 25.15 |
| Zm00001d035076_P001 | Maize | mitochondrion, nucleus | 25.14 | 25.14 |
| CDY42810 | Canola | nucleus | 35.75 | 25.1 |
| Zm00001d038221_P001 | Maize | plastid | 23.74 | 25.07 |
| CDX83510 | Canola | nucleus | 35.47 | 24.9 |
| Zm00001d028999_P001 | Maize | nucleus | 25.42 | 24.4 |
| Zm00001d010239_P001 | Maize | nucleus | 28.21 | 24.28 |
| Zm00001d038207_P001 | Maize | nucleus | 27.65 | 23.57 |
| Zm00001d000112_P001 | Maize | nucleus | 23.46 | 23.4 |
| Zm00001d013003_P001 | Maize | nucleus, plastid | 23.74 | 23.16 |
| Zm00001d042580_P001 | Maize | nucleus | 28.21 | 22.6 |
| Zm00001d008399_P001 | Maize | nucleus | 24.86 | 22.36 |
| Zm00001d021818_P002 | Maize | nucleus | 25.98 | 22.2 |
| Zm00001d022424_P001 | Maize | nucleus | 17.32 | 18.79 |
| Zm00001d023294_P001 | Maize | nucleus | 23.18 | 17.47 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A1D6HS16 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | ProteinID:ONM51263.1 | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR44543 | PANTHER:PTHR44543:SF3 | SUPFAM:SSF101941 | UniParc:UPI000220CDF7 | EnsemblPlantsGene:Zm00001d018773 |
| EnsemblPlants:Zm00001d018773_P001 | EnsemblPlants:Zm00001d018773_T001 | SEG:seg | : | : | : |
Description
NAC-transcription factor 73Transcription factor JUNGBRUNNEN 1
Coordinates
chr7:+:4825498..4826987
Molecular Weight (calculated)
39967.6 Da
IEP (calculated)
6.194
GRAVY (calculated)
-0.605
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRKEIMAG DHGGGEGEEV VVLVGDYDYE LEEEDEDMLP GFRFHPTDEE LVTFYLRRKV AGKRLTIEII KDFDIYKHDP WDLPKSSSIS GEKEWYFFCL
101: RGRKYRNSIR PNRVTGSGFW KATGIDRPIH SAASGRAGDP IGLKKSLVFY RGSAGKGTKT EWMMHEFRLP PRADTAHASP SEQEAEVWTI CRIFRRNFTY
201: KKQGVHCSSK VSSAAAVVAQ PGESSSVTAG SMESDTGDEY TNGLLPQTPL LQDPVNMIDG YSYSYGYDHH HHQQQQLQHG QWNSHALHAA ATAPLPSPTT
301: MAAFHHGVLS SPPAAASGPL DDMYYKDGSS WDDIGRMVME LTDPSPSVFS FYDTRSYA
101: RGRKYRNSIR PNRVTGSGFW KATGIDRPIH SAASGRAGDP IGLKKSLVFY RGSAGKGTKT EWMMHEFRLP PRADTAHASP SEQEAEVWTI CRIFRRNFTY
201: KKQGVHCSSK VSSAAAVVAQ PGESSSVTAG SMESDTGDEY TNGLLPQTPL LQDPVNMIDG YSYSYGYDHH HHQQQQLQHG QWNSHALHAA ATAPLPSPTT
301: MAAFHHGVLS SPPAAASGPL DDMYYKDGSS WDDIGRMVME LTDPSPSVFS FYDTRSYA
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.