Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G411800.1 | Wheat | nucleus | 89.5 | 87.22 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 87.76 | 85.75 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 89.5 | 81.43 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 89.8 | 80.21 |
| Os03t0777000-01 | Rice | nucleus | 68.51 | 64.92 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 52.48 | 62.28 |
| Zm00001d007850_P001 | Maize | nucleus | 43.73 | 59.76 |
| EER95852 | Sorghum | nucleus | 56.56 | 56.56 |
| Zm00001d018773_P001 | Maize | nucleus | 55.1 | 52.79 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 32.65 | 52.34 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 39.36 | 51.53 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 44.61 | 51.34 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 41.4 | 51.26 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 37.03 | 50.8 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 45.19 | 50.49 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 40.23 | 50.0 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 39.94 | 48.24 |
| KRH73618 | Soybean | cytosol | 44.61 | 47.81 |
| Bra000282.1-P | Field mustard | nucleus | 37.32 | 47.06 |
| PGSC0003DMT400090327 | Potato | cytosol | 38.78 | 46.83 |
| KRH14512 | Soybean | nucleus | 44.31 | 46.63 |
| Solyc05g021090.2.1 | Tomato | nucleus | 37.9 | 46.59 |
| AT2G43000.1 | Thale cress | nucleus | 37.32 | 46.55 |
| PGSC0003DMT400003082 | Potato | nucleus | 37.9 | 46.1 |
| CDY53654 | Canola | nucleus | 37.32 | 45.88 |
| PGSC0003DMT400054407 | Potato | nucleus | 41.98 | 45.86 |
| Solyc02g069960.2.1 | Tomato | nucleus | 41.4 | 45.81 |
| Bra004736.1-P | Field mustard | nucleus | 37.32 | 45.71 |
| CDY55499 | Canola | nucleus | 37.03 | 45.52 |
| KRG98971 | Soybean | nucleus | 40.23 | 45.39 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 38.78 | 45.08 |
| KRH46012 | Soybean | nucleus | 39.94 | 45.07 |
| CDY64562 | Canola | nucleus | 38.48 | 44.9 |
| CDY30373 | Canola | nucleus | 36.15 | 44.77 |
| Bra037743.1-P | Field mustard | nucleus | 36.15 | 44.77 |
| CDX82569 | Canola | nucleus | 39.36 | 44.7 |
| AT3G12910.1 | Thale cress | nucleus | 39.36 | 44.55 |
| KRH13702 | Soybean | nucleus | 41.11 | 44.34 |
| CDY14865 | Canola | nucleus | 35.57 | 44.04 |
| CDY43391 | Canola | nucleus | 37.61 | 43.73 |
| CDY24238 | Canola | nucleus | 38.78 | 43.32 |
| Bra039353.1-P | Field mustard | nucleus | 38.78 | 43.32 |
| Solyc07g045030.2.1 | Tomato | nucleus | 40.82 | 42.3 |
| CDY60122 | Canola | nucleus | 39.65 | 41.59 |
| Bra034719.1-P | Field mustard | nucleus | 39.36 | 41.28 |
| PGSC0003DMT400049124 | Potato | nucleus | 30.03 | 41.2 |
| CDY23551 | Canola | nucleus | 39.07 | 35.73 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 35.28 | 31.11 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 33.82 | 30.45 |
| TraesCS5A01G228000.1 | Wheat | nucleus | 34.11 | 29.7 |
| TraesCS2A01G063300.1 | Wheat | nucleus | 32.94 | 29.66 |
| TraesCS2A01G063400.1 | Wheat | nucleus | 24.2 | 29.54 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 25.66 | 29.43 |
| TraesCS2A01G063200.1 | Wheat | nucleus | 32.94 | 29.2 |
| TraesCS6A01G057400.1 | Wheat | nucleus | 24.2 | 28.62 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 23.91 | 27.99 |
| TraesCS7A01G549000.1 | Wheat | cytosol, nucleus, plastid | 23.91 | 27.61 |
| TraesCS3A01G339600.1 | Wheat | nucleus | 24.78 | 27.07 |
| TraesCS4A01G131000.1 | Wheat | nucleus | 27.11 | 26.27 |
| TraesCS5A01G500500.1 | Wheat | nucleus | 25.36 | 25.74 |
| TraesCS5A01G468300.1 | Wheat | nucleus | 24.49 | 25.69 |
| TraesCS2A01G101900.1 | Wheat | nucleus | 25.66 | 25.29 |
| TraesCS2A01G102000.1 | Wheat | nucleus | 26.24 | 25.21 |
| CDY42810 | Canola | nucleus | 37.32 | 25.1 |
| TraesCS5A01G500400.1 | Wheat | nucleus | 25.36 | 25.0 |
| TraesCS3A01G162900.1 | Wheat | cytosol | 22.45 | 25.0 |
| CDX83510 | Canola | nucleus | 37.03 | 24.9 |
| TraesCS5A01G500700.1 | Wheat | nucleus | 25.66 | 24.72 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 23.91 | 24.48 |
| TraesCS3A01G078400.1 | Wheat | nucleus | 25.07 | 24.36 |
| TraesCS5A01G500600.1 | Wheat | nucleus | 25.66 | 23.85 |
| TraesCS1A01G261800.1 | Wheat | nucleus | 27.11 | 23.72 |
| TraesCS5A01G143200.1 | Wheat | nucleus | 24.78 | 23.68 |
| TraesCS7A01G318500.1 | Wheat | nucleus | 25.95 | 22.94 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 26.24 | 22.11 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 26.53 | 21.88 |
| TraesCS3A01G403300.1 | Wheat | nucleus | 26.24 | 21.84 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR44543 | PANTHER:PTHR44543:SF3 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS5A01G411900 | EnsemblPlants:TraesCS5A01G411900.1 | SEG:seg |
Description
No Description!
Coordinates
chr5A:+:600438334..600439563
Molecular Weight (calculated)
38599.1 Da
IEP (calculated)
5.288
GRAVY (calculated)
-0.650
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAKAEMSAM ELEKVMSDGE VVLGGAGDEE EEDDDVVLPG YRFHPTDEEL VTFYLRRKVA RKPLRIEVIR EMDIYKHDPW DLPKASTVGG EKEWYFFCLR
101: GRKYRNSIRP NRVTGSGFWK ATGIDRPIYS AGSGGASSGV SIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PPAAVTNSSP SMQEAEVWTI CRIFRRTITY
201: RKQQQPWRPA PAPSAADSNS NTGSFESSEA GDEYMNCMQA PAAPCIPQQQ QQYISQTGTV DSSNFFYEDT MPNQQFQGQW NAAPVPEQKL QSPLSTAASF
301: HQNDHSHAVA ANDFYKVEGY LEEIARMMEV TDPTGFYDYR SYG
101: GRKYRNSIRP NRVTGSGFWK ATGIDRPIYS AGSGGASSGV SIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PPAAVTNSSP SMQEAEVWTI CRIFRRTITY
201: RKQQQPWRPA PAPSAADSNS NTGSFESSEA GDEYMNCMQA PAAPCIPQQQ QQYISQTGTV DSSNFFYEDT MPNQQFQGQW NAAPVPEQKL QSPLSTAASF
301: HQNDHSHAVA ANDFYKVEGY LEEIARMMEV TDPTGFYDYR SYG
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.