Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G401200.1 | Wheat | nucleus | 98.33 | 98.33 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 96.99 | 97.32 |
| KXG33829 | Sorghum | nucleus | 81.61 | 83.85 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 80.6 | 81.69 |
| Os01t0884300-01 | Rice | nucleus | 81.94 | 80.86 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 74.92 | 76.45 |
| KRH17977 | Soybean | nucleus | 57.86 | 64.55 |
| CDX90054 | Canola | nucleus | 60.54 | 63.51 |
| Bra033239.1-P | Field mustard | nucleus | 60.54 | 63.51 |
| CDY15158 | Canola | nucleus | 60.2 | 62.94 |
| KRH16387 | Soybean | nucleus | 58.86 | 62.86 |
| AT1G01720.1 | Thale cress | nucleus | 60.54 | 62.63 |
| VIT_18s0001g02300.t01 | Wine grape | nucleus | 62.21 | 62.21 |
| PGSC0003DMT400023917 | Potato | nucleus | 60.2 | 61.86 |
| Solyc11g017470.1.1 | Tomato | nucleus | 59.87 | 61.51 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 56.19 | 61.31 |
| KRH59618 | Soybean | nucleus | 60.87 | 61.07 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 52.51 | 60.85 |
| Solyc06g060230.2.1 | Tomato | nucleus | 60.2 | 60.81 |
| PGSC0003DMT400045294 | Potato | nucleus | 59.87 | 60.47 |
| CDY41537 | Canola | nucleus | 50.5 | 60.4 |
| Bra038663.1-P | Field mustard | nucleus | 50.5 | 60.4 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 50.84 | 60.08 |
| CDX84443 | Canola | nucleus | 50.5 | 59.92 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 58.86 | 59.86 |
| KRH63977 | Soybean | nucleus | 58.19 | 59.79 |
| KRH64668 | Soybean | nucleus | 59.87 | 59.67 |
| CDY40894 | Canola | nucleus | 51.84 | 59.62 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 52.17 | 59.54 |
| KRH53247 | Soybean | nucleus | 59.53 | 59.53 |
| KRH53959 | Soybean | nucleus | 58.53 | 59.32 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 51.84 | 59.16 |
| Bra028645.1-P | Field mustard | nucleus | 54.52 | 58.63 |
| Bra029201.1-P | Field mustard | cytosol | 51.84 | 58.49 |
| CDY31350 | Canola | nucleus | 51.84 | 58.49 |
| Bra008309.1-P | Field mustard | cytosol, nucleus, plastid | 50.84 | 58.46 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 50.84 | 58.46 |
| CDY21567 | Canola | nucleus | 54.18 | 58.27 |
| CDX69919 | Canola | nucleus | 53.85 | 57.91 |
| Bra009370.1-P | Field mustard | nucleus | 53.85 | 57.91 |
| AT5G08790.1 | Thale cress | nucleus | 54.52 | 57.6 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 55.85 | 57.59 |
| Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 53.85 | 57.5 |
| CDX81120 | Canola | nucleus | 46.15 | 57.26 |
| Solyc04g009440.2.1 | Tomato | nucleus | 57.53 | 57.14 |
| PGSC0003DMT400082472 | Potato | nucleus | 57.53 | 56.77 |
| CDX84050 | Canola | nucleus | 34.11 | 52.85 |
| CDY39846 | Canola | mitochondrion | 51.51 | 52.38 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 57.19 | 51.04 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 55.85 | 50.15 |
| AT5G63790.2 | Thale cress | cytosol | 52.84 | 49.07 |
| TraesCS6A01G057400.1 | Wheat | nucleus | 40.47 | 41.72 |
| TraesCS5A01G468300.1 | Wheat | nucleus | 42.81 | 39.14 |
| TraesCS3A01G339600.1 | Wheat | nucleus | 40.8 | 38.85 |
| TraesCS3A01G078400.1 | Wheat | nucleus | 40.47 | 34.28 |
| TraesCS2A01G101900.1 | Wheat | nucleus | 39.46 | 33.91 |
| TraesCS3A01G162900.1 | Wheat | cytosol | 34.11 | 33.12 |
| TraesCS2A01G102000.1 | Wheat | nucleus | 39.13 | 32.77 |
| TraesCS4A01G131000.1 | Wheat | nucleus | 37.79 | 31.92 |
| TraesCS5A01G143200.1 | Wheat | nucleus | 37.46 | 31.2 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 41.14 | 30.22 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 40.8 | 29.33 |
| TraesCS7A01G549000.1 | Wheat | cytosol, nucleus, plastid | 27.09 | 27.27 |
| TraesCS5A01G500500.1 | Wheat | nucleus | 29.43 | 26.04 |
| TraesCS5A01G500400.1 | Wheat | nucleus | 30.1 | 25.86 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 29.43 | 25.66 |
| TraesCS5A01G500700.1 | Wheat | nucleus | 29.1 | 24.44 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 28.43 | 24.15 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 30.1 | 23.87 |
| TraesCS1A01G261800.1 | Wheat | nucleus | 31.1 | 23.72 |
| TraesCS2A01G063400.1 | Wheat | nucleus | 22.07 | 23.49 |
| TraesCS5A01G500600.1 | Wheat | nucleus | 28.76 | 23.31 |
| TraesCS2A01G063300.1 | Wheat | nucleus | 29.1 | 22.83 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 29.1 | 22.36 |
| TraesCS2A01G063200.1 | Wheat | nucleus | 28.76 | 22.22 |
| TraesCS7A01G318500.1 | Wheat | nucleus | 28.76 | 22.16 |
| TraesCS5A01G228000.1 | Wheat | nucleus | 29.1 | 22.08 |
| TraesCS5A01G339600.1 | Wheat | nucleus | 28.09 | 22.05 |
| TraesCS3A01G403300.1 | Wheat | nucleus | 30.1 | 21.84 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31719 | PANTHER:PTHR31719:SF43 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS3A01G406000 | EnsemblPlants:TraesCS3A01G406000.1 | SEG:seg |
Description
No Description!
Coordinates
chr3A:+:650056083..650058053
Molecular Weight (calculated)
32738.9 Da
IEP (calculated)
8.994
GRAVY (calculated)
-0.603
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGQELNLP PGFRFHPTDE ELVTHYLCRR CAGAPIAVPI ITEIDLYKFD PWQLPKMALY GEKEWYFFSP RDRKYPNGSR PNRAAGSGYW KATGADKPVG
101: TPKPLAIKKA LVFYAGKAPK GEKTNWIMHE YRLADVDRSA RKKNSLRLDD WVLCRIYNKK GGMEKPAAVD RKPAAMGGYG GGPGAMASSP PEQKPVMGMN
201: ANGGGGGAQP FRDFAAYYDR PSDSMPRLHA DSSCSEQVLS PEFPAGEVQS QPKISEWERS FASGGDPVNP AAGSMLEPNG GFGGDPLLQD ILMYWGKPF
101: TPKPLAIKKA LVFYAGKAPK GEKTNWIMHE YRLADVDRSA RKKNSLRLDD WVLCRIYNKK GGMEKPAAVD RKPAAMGGYG GGPGAMASSP PEQKPVMGMN
201: ANGGGGGAQP FRDFAAYYDR PSDSMPRLHA DSSCSEQVLS PEFPAGEVQS QPKISEWERS FASGGDPVNP AAGSMLEPNG GFGGDPLLQD ILMYWGKPF
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.