Factsheet for Bra033239.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90054	Canola	nucleus	100.0	100.0
CDY15158	Canola	nucleus	98.25	97.9
AT1G01720.1	Thale cress	nucleus	89.82	88.58
GSMUA_Achr10P...	Banana	nucleus	58.25	65.1
Bra008309.1-P	Field mustard	cytosol, nucleus, plastid	57.89	63.46
GSMUA_Achr6P18720_001	Banana	nucleus	60.7	63.14
KXG33829	Sorghum	nucleus	63.16	61.86
TraesCS3A01G406000.1	Wheat	nucleus	63.51	60.54
TraesCS3D01G401200.1	Wheat	nucleus	63.51	60.54
TraesCS3B01G439600.1	Wheat	nucleus	63.16	60.4
Bra009370.1-P	Field mustard	nucleus	58.6	60.07
Os01t0884300-01	Rice	nucleus	63.86	60.07
Bra038663.1-P	Field mustard	nucleus	52.63	60.0
Zm00001d042609_P001	Maize	cytosol, mitochondrion, nucleus	62.11	60.0
Bra028645.1-P	Field mustard	nucleus	58.25	59.71
GSMUA_Achr7P23250_001	Banana	nucleus	56.14	59.7
Bra029201.1-P	Field mustard	cytosol	55.09	59.25
HORVU1Hr1G063740.1	Barley	nucleus	60.7	59.04
GSMUA_Achr6P25380_001	Banana	nucleus	56.49	58.76
Bra006015.1-P	Field mustard	cytosol, nucleus, plastid	57.54	58.57
TraesCS1A01G263700.1	Wheat	nucleus	60.0	58.36
TraesCS1D01G263800.1	Wheat	nucleus	60.35	57.33
GSMUA_Achr6P17720_001	Banana	nucleus	57.89	56.9
TraesCS1B01G274300.1	Wheat	nucleus	59.65	56.48
GSMUA_Achr3P18990_001	Banana	plastid	58.25	49.85
KXG22031	Sorghum	nucleus	59.3	49.56
Zm00001d038221_P001	Maize	plastid	58.95	49.56
Os11t0184900-02	Rice	nucleus	55.44	48.02
HORVU4Hr1G017430.7	Barley	nucleus	55.44	47.59
TraesCS4B01G098200.1	Wheat	nucleus	55.09	47.01
TraesCS4A01G219700.1	Wheat	nucleus	55.09	46.87
TraesCS4D01G094400.1	Wheat	nucleus	55.09	46.87
Zm00001d000112_P001	Maize	nucleus	56.14	44.57
OQU83033	Sorghum	nucleus	55.09	40.89
Bra004385.1-P	Field mustard	cytosol	37.89	40.0
Bra019052.1-P	Field mustard	nucleus	41.4	39.33
Bra001596.1-P	Field mustard	nucleus	40.7	39.32
Bra026353.1-P	Field mustard	nucleus	41.05	39.0
Bra018997.1-P	Field mustard	nucleus	44.21	38.53
Bra003998.1-P	Field mustard	nucleus	31.93	38.08
Bra021113.1-P	Field mustard	nucleus	42.11	37.85
Bra027101.1-P	Field mustard	nucleus	41.75	37.3
Bra027237.1-P	Field mustard	nucleus	44.91	36.47
Bra027238.1-P	Field mustard	nucleus	42.11	36.04
Bra021114.1-P	Field mustard	nucleus	43.86	34.92
Bra001597.1-P	Field mustard	nucleus	42.81	34.86
Bra031949.1-P	Field mustard	nucleus	38.6	33.85
Bra040152.1-P	Field mustard	nucleus	41.4	33.05
Bra000282.1-P	Field mustard	nucleus	30.53	31.99
Bra018998.1-P	Field mustard	nucleus	42.81	31.85
Bra004736.1-P	Field mustard	nucleus	30.88	31.43
Bra037743.1-P	Field mustard	nucleus	30.18	31.05
Bra037283.1-P	Field mustard	nucleus	28.42	29.03
Bra039353.1-P	Field mustard	nucleus	30.18	28.01
Bra013034.1-P	Field mustard	nucleus	27.37	27.76
Bra034719.1-P	Field mustard	nucleus	30.88	26.91
Bra028441.1-P	Field mustard	nucleus	29.82	25.37
Bra002018.1-P	Field mustard	cytosol	27.02	24.14
Bra026595.1-P	Field mustard	nucleus	31.93	23.1
Bra017416.1-P	Field mustard	nucleus	31.23	22.36
Bra024818.1-P	Field mustard	nucleus	31.23	21.87
Bra016294.1-P	Field mustard	nucleus	31.58	21.84
Bra004403.1-P	Field mustard	nucleus	30.88	21.73
Bra024677.1-P	Field mustard	nucleus	31.58	21.63

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra033239	EnsemblPlants:Bra033239.1	EnsemblPlants:Bra033239.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009611	GO:GO:0009719
GO:GO:0009788	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EWQ4	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31719	PANTHER:PTHR31719:SF16	SUPFAM:SSF101941
UniParc:UPI00001A351B	:	:	:	:	:

Description

AT1G01720 (E=1e-148) ATAF1, ANAC002 | ATAF1; transcription activator/ transcription factor

Coordinates

chrA10:+:4736102..4737149

Molecular Weight (calculated)

32256.3 Da

IEP (calculated)

7.439

GRAVY (calculated)

-0.617

Length

285 amino acids

Sequence
(BLAST)

001: MSELQLPPGF RFHPTDEELV MHYLCRKCAS QSIAVPIIAE IDLYKYDPWE LPGLALYGEK EWYFFSPRDR KYPNGSRPNR SAGSGYWKAT GADKPIGLPK
101: PVGIKKALVF YAGKAPKGEK TNWIMHEYRL ADVDRSSAAR KKKNSLRLDD WVLCRIYNKK GAIEKRGPPP TPVVYGDEVV EEKPRLSEMG MPPPPVMPND
201: FVYFDTSDSV PKLHTTESSC SEQVVSPEFT SEVQSEPKWK DWSGEKSSLD FGFNYIDATA FGGGGGSNQL FPLQDMFMYN MPKPY

Best Arabidopsis Sequence Match ( AT1G01720.1 )
(BLAST)

001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY

Arabidopsis Description

NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.