Factsheet for Bra039353.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24238	Canola	nucleus	98.7	98.7
CDY43391	Canola	nucleus	94.14	97.97
AT3G12910.1	Thale cress	nucleus	81.11	82.18
Bra034719.1-P	Field mustard	nucleus	84.69	79.51
Bra000282.1-P	Field mustard	nucleus	45.28	51.1
Bra037743.1-P	Field mustard	nucleus	44.63	49.46
GSMUA_Achr10P...	Banana	cytosol	42.02	48.31
Zm00001d007850_P001	Maize	nucleus	39.09	47.81
Bra004736.1-P	Field mustard	nucleus	43.32	47.5
KRH46012	Soybean	nucleus	46.25	46.71
GSMUA_Achr7P00860_001	Banana	nucleus	39.41	46.18
KRG98971	Soybean	nucleus	45.28	45.72
GSMUA_Achr4P32010_001	Banana	nucleus	42.67	45.64
GSMUA_Achr9P10040_001	Banana	nucleus	44.95	45.39
GSMUA_Achr4P23030_001	Banana	nucleus	35.83	44.0
GSMUA_Achr5P02170_001	Banana	nucleus	43.0	43.0
HORVU5Hr1G099470.2	Barley	cytosol	43.97	40.06
TraesCS5B01G415600.1	Wheat	nucleus	45.6	39.89
TraesCS5D01G421100.1	Wheat	nucleus	43.97	39.59
Zm00001d031164_P001	Maize	nucleus	39.09	39.22
Zm00001d013151_P001	Maize	cytosol	42.67	38.99
TraesCS5B01G415700.1	Wheat	nucleus	44.3	38.86
TraesCS4B01G384700.1	Wheat	cytoskeleton, cytosol, nucleus	43.0	38.82
TraesCS5A01G411900.1	Wheat	nucleus	43.32	38.78
EES17466	Sorghum	nucleus	38.11	38.49
HORVU5Hr1G099460.1	Barley	nucleus	43.0	38.15
Os03t0777000-01	Rice	nucleus	44.95	38.12
TraesCS5A01G411800.1	Wheat	nucleus	43.65	38.07
HORVU5Hr1G099390.2	Barley	nucleus	35.83	38.06
EER93360	Sorghum	nucleus	45.6	37.84
EER95852	Sorghum	nucleus	41.69	37.32
Zm00001d034277_P001	Maize	cytosol, mitochondrion, nucleus	43.97	36.68
TraesCS5D01G420800.1	Wheat	nucleus	43.32	36.54
Zm00001d018773_P001	Maize	nucleus	42.35	36.31
TraesCS5D01G421000.1	Wheat	nucleus	44.3	35.42
TraesCS5A01G411700.1	Wheat	nucleus	43.32	35.28
TraesCS5B01G415400.1	Wheat	nucleus	43.0	35.01
Bra028441.1-P	Field mustard	nucleus	35.83	32.84
Bra038663.1-P	Field mustard	nucleus	25.73	31.6
Bra037283.1-P	Field mustard	nucleus	28.01	30.82
Bra013034.1-P	Field mustard	nucleus	27.69	30.25
Bra033239.1-P	Field mustard	nucleus	28.01	30.18
Bra008309.1-P	Field mustard	cytosol, nucleus, plastid	25.41	30.0
Bra004385.1-P	Field mustard	cytosol	26.38	30.0
Bra029201.1-P	Field mustard	cytosol	25.73	29.81
Bra028645.1-P	Field mustard	nucleus	26.71	29.5
Bra009370.1-P	Field mustard	nucleus	26.71	29.5
Bra006015.1-P	Field mustard	cytosol, nucleus, plastid	26.71	29.29
Bra027101.1-P	Field mustard	nucleus	29.64	28.53
Bra026353.1-P	Field mustard	nucleus	27.69	28.33
Bra019052.1-P	Field mustard	nucleus	27.04	27.67
Bra024677.1-P	Field mustard	nucleus	37.46	27.64
Bra003998.1-P	Field mustard	nucleus	21.17	27.2
Bra001596.1-P	Field mustard	nucleus	26.06	27.12
Bra018997.1-P	Field mustard	nucleus	28.66	26.91
Bra002018.1-P	Field mustard	cytosol	27.69	26.65
Bra021113.1-P	Field mustard	nucleus	27.04	26.18
Bra016294.1-P	Field mustard	nucleus	34.85	25.97
Bra027238.1-P	Field mustard	nucleus	27.36	25.23
Bra031949.1-P	Field mustard	nucleus	26.06	24.62
Bra021114.1-P	Field mustard	nucleus	28.66	24.58
Bra001597.1-P	Field mustard	nucleus	28.01	24.57
Bra004403.1-P	Field mustard	nucleus	32.25	24.44
Bra027237.1-P	Field mustard	nucleus	27.69	24.22
Bra040152.1-P	Field mustard	nucleus	27.36	23.53
Bra026595.1-P	Field mustard	nucleus	29.64	23.1
Bra017416.1-P	Field mustard	nucleus	28.99	22.36
Bra024818.1-P	Field mustard	nucleus	28.66	21.62
Bra018998.1-P	Field mustard	nucleus	26.71	21.41

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra039353	EnsemblPlants:Bra039353.1	EnsemblPlants:Bra039353.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4FE32
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR44543	PANTHER:PTHR44543:SF1
SUPFAM:SSF101941	UniParc:UPI000253E8C9	SEG:seg	:	:	:

Description

AT3G12910 (E=2e-128) | transcription factor

Coordinates

chrScaffold000164:+:71640..73246

Molecular Weight (calculated)

35593.8 Da

IEP (calculated)

8.881

GRAVY (calculated)

-0.807

Length

307 amino acids

Sequence
(BLAST)

001: MDEAMGSWDT RREEQEEEEK QVLKLPGFRF HPTDEELVGF YLSKKVFLKK SSKIDEIISQ IDIYKFDPWD LPRSRNTEKE SYFFCRRGRK YRNSIRPNRV
101: TGSGFWKATG IDKPVYSDGS SKAVIGLKKT LVYYLGSAGK GSKTDWMMHE FRLPTANDTI PGGSTLLNPT PSSLLHAEVW TLCRIFKRNV SSRKYTPDWR
201: ELAGGKRMKP QQSKYQEAYI SFGDNESSSS TNNINLMERK ENYERNVFQL RQTPHQHQPI PVDTTITTQV DSTVPHFSND NIHDITYENW DELRSVVEFA
301: FGPSFLS

Best Arabidopsis Sequence Match ( AT3G12910.1 )
(BLAST)

001: MEKMIEPRDN TRESEDEDAL KLPGFRFHPT DEELVGYYLS KKVLLKKTSK IDEIVSQIDI YKFDPWDLPR SRNTEKESYF FCKRGRKYRN SIRPNRVTGS
101: GFWKATGIDK PVYSDGSNKA VIGLKKTLVY YLGSAGKGNK TDWMMHEFRL PTANDTIPGG PTHSNPTPTS LLHAEVWTLC RIFKRTVSSR KYTPDWRELA
201: NGKRVKQQQS NYQEAYINFG DNESSSSTNV MNVREGKGNY ERSVFQLQQT PYQHQNQPIL MDTTHVDSFQ HFSNDNIHHE TYETWPDELR SVVEFAFPPS
301: FLS

Arabidopsis Description

NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LSI4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.