Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P00860_001 | Banana | nucleus | 66.4 | 63.36 |
| GSMUA_Achr10P... | Banana | cytosol | 53.2 | 49.81 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 58.0 | 47.7 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 40.8 | 47.66 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 58.4 | 47.56 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 54.4 | 47.39 |
| Zm00001d007850_P001 | Maize | nucleus | 45.6 | 45.42 |
| Bra000282.1-P | Field mustard | nucleus | 49.2 | 45.22 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 53.6 | 44.97 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 48.8 | 44.04 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 48.0 | 43.48 |
| Bra037743.1-P | Field mustard | nucleus | 47.6 | 42.96 |
| CDY30373 | Canola | nucleus | 47.6 | 42.96 |
| PGSC0003DMT400090327 | Potato | cytosol | 48.8 | 42.96 |
| AT2G43000.1 | Thale cress | nucleus | 47.2 | 42.91 |
| KRG98971 | Soybean | nucleus | 51.6 | 42.43 |
| CDY55499 | Canola | nucleus | 47.2 | 42.29 |
| CDY14865 | Canola | nucleus | 46.8 | 42.24 |
| Bra004736.1-P | Field mustard | nucleus | 47.2 | 42.14 |
| KRH46012 | Soybean | nucleus | 51.2 | 42.11 |
| CDY53654 | Canola | nucleus | 46.8 | 41.94 |
| PGSC0003DMT400003082 | Potato | nucleus | 47.2 | 41.84 |
| Solyc05g021090.2.1 | Tomato | nucleus | 46.4 | 41.58 |
| KRH73618 | Soybean | cytosol | 53.2 | 41.56 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 47.2 | 41.55 |
| KRH13702 | Soybean | nucleus | 52.8 | 41.51 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 48.4 | 41.02 |
| KRH14512 | Soybean | nucleus | 53.2 | 40.8 |
| Solyc02g069960.2.1 | Tomato | nucleus | 48.8 | 39.35 |
| PGSC0003DMT400054407 | Potato | nucleus | 48.4 | 38.53 |
| Zm00001d013151_P001 | Maize | cytosol | 50.8 | 37.8 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 50.8 | 37.03 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 29.6 | 37.0 |
| CDY43391 | Canola | nucleus | 43.6 | 36.95 |
| CDY64562 | Canola | nucleus | 43.2 | 36.73 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 50.0 | 36.66 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 49.2 | 36.5 |
| EER95852 | Sorghum | nucleus | 50.0 | 36.44 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 50.8 | 36.29 |
| Solyc07g045030.2.1 | Tomato | nucleus | 48.0 | 36.25 |
| CDY24238 | Canola | nucleus | 44.4 | 36.16 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 41.6 | 35.99 |
| Bra039353.1-P | Field mustard | nucleus | 44.0 | 35.83 |
| CDX82569 | Canola | nucleus | 42.8 | 35.43 |
| EER93360 | Sorghum | nucleus | 52.4 | 35.41 |
| Os03t0777000-01 | Rice | nucleus | 51.2 | 35.36 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 48.0 | 35.29 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 51.2 | 34.78 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 48.8 | 34.76 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 48.0 | 34.68 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 48.8 | 34.66 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 50.4 | 34.62 |
| Zm00001d018773_P001 | Maize | nucleus | 49.2 | 34.36 |
| AT3G12910.1 | Thale cress | nucleus | 41.2 | 33.99 |
| Bra034719.1-P | Field mustard | nucleus | 44.4 | 33.95 |
| CDY60122 | Canola | nucleus | 44.4 | 33.95 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 50.8 | 33.69 |
| PGSC0003DMT400049124 | Potato | nucleus | 33.6 | 33.6 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 50.4 | 33.42 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 49.2 | 32.03 |
| GSMUA_Achr11P... | Banana | nucleus | 32.0 | 30.53 |
| GSMUA_Achr5P19060_001 | Banana | nucleus | 29.2 | 29.92 |
| GSMUA_Achr10P... | Banana | nucleus | 30.4 | 29.8 |
| GSMUA_Achr5P17060_001 | Banana | nucleus | 33.2 | 29.43 |
| CDY23551 | Canola | nucleus | 44.0 | 29.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.0 | 28.74 |
| GSMUA_Achr6P02680_001 | Banana | nucleus | 44.0 | 28.57 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 30.4 | 28.36 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 29.6 | 28.03 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 30.0 | 27.78 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 30.4 | 27.74 |
| GSMUA_Achr11P... | Banana | nucleus | 34.8 | 27.36 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 31.6 | 27.24 |
| GSMUA_Achr1P02710_001 | Banana | nucleus | 29.6 | 27.21 |
| GSMUA_Achr10P... | Banana | cytosol | 45.6 | 27.01 |
| GSMUA_Achr11P... | Banana | nucleus | 36.0 | 26.87 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 29.2 | 26.64 |
| GSMUA_Achr7P23650_001 | Banana | nucleus | 36.8 | 26.44 |
| GSMUA_Achr3P14720_001 | Banana | nucleus | 30.4 | 26.3 |
| GSMUA_Achr10P... | Banana | nucleus | 31.6 | 26.16 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 30.0 | 25.86 |
| GSMUA_Achr3P00560_001 | Banana | nucleus | 28.8 | 25.81 |
| GSMUA_Achr10P... | Banana | nucleus | 34.8 | 25.66 |
| GSMUA_Achr7P04030_001 | Banana | nucleus | 29.2 | 25.61 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 30.0 | 25.6 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 30.4 | 25.5 |
| GSMUA_Achr10P... | Banana | nucleus | 33.2 | 25.38 |
| GSMUA_Achr3P21690_001 | Banana | nucleus | 35.6 | 25.0 |
| CDX83510 | Canola | nucleus | 50.0 | 24.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.0 | 24.46 |
| GSMUA_Achr10P... | Banana | cytosol | 29.6 | 24.34 |
| CDY42810 | Canola | nucleus | 49.6 | 24.31 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 33.2 | 24.06 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 32.0 | 23.95 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 31.2 | 23.93 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 31.2 | 23.42 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 32.0 | 22.28 |
| GSMUA_Achr1P18110_001 | Banana | cytosol, nucleus, plastid | 19.2 | 22.12 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 32.0 | 21.74 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 32.4 | 20.4 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr4G23030_001 |
| EnsemblPlants:GSMUA_Achr4P23030_001 | EnsemblPlants:GSMUA_Achr4T23030_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0SRB4 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 | SUPFAM:SSF101941 | UniParc:UPI0002956ABF |
Description
no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G23030_001]
Coordinates
chr4:-:23248212..23249133
Molecular Weight (calculated)
28759.8 Da
IEP (calculated)
8.040
GRAVY (calculated)
-0.760
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MWREKGRVME DEDVVPLPGF RFRPTDEEIV GFYLRRKVDE KPLSVEVIKE MDIYKYDPWD LPKVRSTGCE EYFFCRRGRK YKNSIRPNRV TGSGFWKATG
101: VDRPIYAAGN SGDCIGLKKS LVFYSRGRTA AAKGTKTEWM MHEFRLPCDS PCTQEAEVWT ICRVFKRSVS HRANPNSWKA SDHKEQTPPE SSSESFNGNY
201: FHGGQWNSTN QASVPLCSDT VQSPSMNEFF SGDDNWDELG RIMNSMISNI
101: VDRPIYAAGN SGDCIGLKKS LVFYSRGRTA AAKGTKTEWM MHEFRLPCDS PCTQEAEVWT ICRVFKRSVS HRANPNSWKA SDHKEQTPPE SSSESFNGNY
201: FHGGQWNSTN QASVPLCSDT VQSPSMNEFF SGDDNWDELG RIMNSMISNI
001: MEKMIEPRDN TRESEDEDAL KLPGFRFHPT DEELVGYYLS KKVLLKKTSK IDEIVSQIDI YKFDPWDLPR SRNTEKESYF FCKRGRKYRN SIRPNRVTGS
101: GFWKATGIDK PVYSDGSNKA VIGLKKTLVY YLGSAGKGNK TDWMMHEFRL PTANDTIPGG PTHSNPTPTS LLHAEVWTLC RIFKRTVSSR KYTPDWRELA
201: NGKRVKQQQS NYQEAYINFG DNESSSSTNV MNVREGKGNY ERSVFQLQQT PYQHQNQPIL MDTTHVDSFQ HFSNDNIHHE TYETWPDELR SVVEFAFPPS
301: FLS
101: GFWKATGIDK PVYSDGSNKA VIGLKKTLVY YLGSAGKGNK TDWMMHEFRL PTANDTIPGG PTHSNPTPTS LLHAEVWTLC RIFKRTVSSR KYTPDWRELA
201: NGKRVKQQQS NYQEAYINFG DNESSSSTNV MNVREGKGNY ERSVFQLQQT PYQHQNQPIL MDTTHVDSFQ HFSNDNIHHE TYETWPDELR SVVEFAFPPS
301: FLS
Arabidopsis Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LSI4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.