Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P19060_001 | Banana | nucleus | 39.17 | 34.84 |
| GSMUA_Achr3P14720_001 | Banana | nucleus | 46.08 | 34.6 |
| GSMUA_Achr7P04030_001 | Banana | nucleus | 45.16 | 34.39 |
| Zm00001d014843_P001 | Maize | nucleus | 41.94 | 33.96 |
| GSMUA_Achr3P00560_001 | Banana | nucleus | 43.32 | 33.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.63 | 32.95 |
| GSMUA_Achr1P02710_001 | Banana | nucleus | 41.01 | 32.72 |
| GSMUA_Achr11P... | Banana | nucleus | 39.17 | 32.44 |
| Os06t0726300-01 | Rice | nucleus | 42.86 | 31.85 |
| PGSC0003DMT400022365 | Potato | cytosol | 35.94 | 31.84 |
| Solyc02g061780.2.1 | Tomato | nucleus | 35.02 | 31.15 |
| TraesCS7D01G535300.1 | Wheat | cytosol, nucleus, plastid | 41.94 | 30.54 |
| TraesCS7B01G472600.1 | Wheat | cytosol, nucleus, plastid | 41.94 | 30.33 |
| TraesCS7B01G472200.1 | Wheat | cytosol, nucleus, plastid | 41.47 | 30.3 |
| TraesCS7A01G549000.1 | Wheat | cytosol, nucleus, plastid | 41.47 | 30.3 |
| VIT_03s0038g03410.t01 | Wine grape | nucleus | 37.33 | 29.03 |
| Bra037283.1-P | Field mustard | nucleus | 37.33 | 29.03 |
| VIT_04s0008g00150.t01 | Wine grape | nucleus | 36.87 | 28.67 |
| CDY47486 | Canola | nucleus | 36.87 | 28.67 |
| CDY47485 | Canola | nucleus | 36.87 | 28.67 |
| CDY26794 | Canola | nucleus | 36.87 | 28.67 |
| AT2G17040.1 | Thale cress | nucleus | 35.94 | 28.26 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 25.81 | 28.0 |
| Zm00001d036364_P001 | Maize | nucleus | 41.94 | 27.91 |
| PGSC0003DMT400028190 | Potato | nucleus | 36.87 | 27.68 |
| Solyc10g055760.1.1 | Tomato | cytosol | 35.94 | 27.56 |
| KRH24118 | Soybean | cytosol | 37.33 | 27.27 |
| KRH29090 | Soybean | nucleus | 37.79 | 27.15 |
| CDY39487 | Canola | nucleus | 35.02 | 27.05 |
| CDY02222 | Canola | nucleus | 35.02 | 27.05 |
| Bra013034.1-P | Field mustard | nucleus | 35.02 | 27.05 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 36.87 | 26.06 |
| Bra002018.1-P | Field mustard | cytosol | 36.41 | 24.76 |
| CDY31385 | Canola | cytosol | 36.41 | 24.76 |
| KXG20943 | Sorghum | nucleus, plastid | 42.86 | 24.09 |
| GSMUA_Achr10P... | Banana | nucleus | 27.65 | 23.53 |
| GSMUA_Achr5P17060_001 | Banana | nucleus | 29.49 | 22.7 |
| GSMUA_Achr11P... | Banana | nucleus | 33.18 | 22.64 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 28.57 | 22.63 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 27.65 | 22.39 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 27.19 | 22.35 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 29.49 | 22.07 |
| GSMUA_Achr10P... | Banana | nucleus | 30.41 | 21.85 |
| GSMUA_Achr10P... | Banana | cytosol | 26.73 | 21.72 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 27.19 | 21.53 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 26.73 | 21.48 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 29.49 | 21.48 |
| GSMUA_Achr10P... | Banana | nucleus | 33.18 | 21.24 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 28.57 | 21.16 |
| GSMUA_Achr7P23650_001 | Banana | nucleus | 33.18 | 20.69 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 24.88 | 20.61 |
| GSMUA_Achr10P... | Banana | nucleus | 30.88 | 20.49 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 27.19 | 20.34 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 28.11 | 20.07 |
| GSMUA_Achr11P... | Banana | nucleus | 30.88 | 20.0 |
| GSMUA_Achr3P21690_001 | Banana | nucleus | 32.72 | 19.94 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 30.41 | 19.76 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 22.12 | 19.2 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 28.57 | 19.02 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 29.03 | 18.26 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 25.81 | 18.24 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 29.95 | 18.11 |
| GSMUA_Achr10P... | Banana | cytosol | 25.35 | 18.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.27 | 17.43 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 29.03 | 17.12 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 26.27 | 17.12 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 22.58 | 17.07 |
| GSMUA_Achr6P02680_001 | Banana | nucleus | 29.03 | 16.36 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 26.27 | 14.36 |
| GSMUA_Achr10P... | Banana | cytosol | 27.19 | 13.98 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr1G18110_001 |
| EnsemblPlants:GSMUA_Achr1P18110_001 | EnsemblPlants:GSMUA_Achr1T18110_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0S0W9 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF2 | SUPFAM:SSF101941 |
| UniParc:UPI000296CE2F | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G18110_001]
Coordinates
chr1:+:13555730..13557087
Molecular Weight (calculated)
24633.9 Da
IEP (calculated)
8.883
GRAVY (calculated)
-0.378
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MIHGTKLQFQ IITTIHLYRH DPWEIITTFH LTAITACMGE REWHFYVPRD RKQGGGRPSR TTERGLWKVT GCDRPVRSAT DPKRLIGLKK TLVYCQGRAP
101: RGTMADRVMN EYRLARELIP TEGVIVLCKI CRKATSMKEL EQRAAAMEEK TSASQVSGSV AVSSPGWSDQ ESFQMTCTYV MDVLCDHTQE EEEVGVPAAD
201: KRRNAIMHQL LILRLGI
101: RGTMADRVMN EYRLARELIP TEGVIVLCKI CRKATSMKEL EQRAAAMEEK TSASQVSGSV AVSSPGWSDQ ESFQMTCTYV MDVLCDHTQE EEEVGVPAAD
201: KRRNAIMHQL LILRLGI
001: MGKDIELPGF RFHPTEEELL DFYLKNMVYG KRSSVEVIGF LNIYRHDPWD LPGLSRIGER EWYFFVPRER KHGNGGRPSR TTEKGYWKAT GSDRKIISLS
101: EPKRVIGLKK TLVFYRGRAP GGSKTDWVMN EFRMPDNCSL PKDVVLCKIY RKATSLKVLE QRAEMEAKMN QTCPNSPLSS SETISFVGKE ENMMTSFRAP
201: QVIAMEEANK IQMHQENAKT EEKQREAETK EPSSSLKLPF GSLPELQLPK PGVEWDQLLS ISPWLQNLTP IVNIYW
101: EPKRVIGLKK TLVFYRGRAP GGSKTDWVMN EFRMPDNCSL PKDVVLCKIY RKATSLKVLE QRAEMEAKMN QTCPNSPLSS SETISFVGKE ENMMTSFRAP
201: QVIAMEEANK IQMHQENAKT EEKQREAETK EPSSSLKLPF GSLPELQLPK PGVEWDQLLS ISPWLQNLTP IVNIYW
Arabidopsis Description
anac036NAC domain containing protein 36 [Source:UniProtKB/TrEMBL;Acc:F4IME8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.