Factsheet for VIT_04s0008g00150.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g03410.t01	Wine grape	nucleus	59.86	59.86
GSMUA_Achr1P02710_001	Banana	nucleus	55.56	56.99
GSMUA_AchrUn_...	Banana	nucleus	52.33	55.94
GSMUA_Achr11P...	Banana	nucleus	51.61	54.96
GSMUA_Achr5P19060_001	Banana	nucleus	44.44	50.82
Os03t0133000-01	Rice	nucleus	55.56	49.05
GSMUA_Achr3P14720_001	Banana	nucleus	50.54	48.79
GSMUA_Achr7P04030_001	Banana	nucleus	49.1	48.07
Solyc02g061780.2.1	Tomato	nucleus	40.86	46.72
PGSC0003DMT400022365	Potato	cytosol	40.86	46.53
Zm00001d048347_P001	Maize	nucleus	52.69	46.37
GSMUA_Achr3P00560_001	Banana	nucleus	46.24	46.24
Zm00001d014843_P001	Maize	nucleus	44.09	45.9
Zm00001d027530_P001	Maize	nucleus	52.69	45.23
EER92917	Sorghum	nucleus	52.69	44.95
TraesCS5A01G500500.1	Wheat	nucleus	53.41	44.08
Os06t0726300-01	Rice	nucleus	45.88	43.84
TraesCS4D01G325700.1	Wheat	nucleus	54.12	43.52
TraesCS5A01G500400.1	Wheat	nucleus	54.12	43.39
TraesCS7D01G535300.1	Wheat	cytosol, nucleus, plastid	46.24	43.29
TraesCS4B01G329100.1	Wheat	nucleus	54.48	43.18
TraesCS4B01G328600.1	Wheat	nucleus	54.12	43.02
TraesCS4B01G328800.1	Wheat	nucleus	53.41	42.94
TraesCS7A01G549000.1	Wheat	cytosol, nucleus, plastid	45.52	42.76
TraesCS4B01G328700.1	Wheat	nucleus	53.76	42.49
TraesCS7B01G472200.1	Wheat	cytosol, nucleus, plastid	45.16	42.42
HORVU4Hr1G081450.1	Barley	nucleus	53.76	42.13
TraesCS7B01G472600.1	Wheat	cytosol, nucleus, plastid	45.16	42.0
TraesCS5A01G500700.1	Wheat	nucleus	53.41	41.85
TraesCS4D01G325800.1	Wheat	nucleus	53.05	41.81
TraesCS4B01G328900.1	Wheat	nucleus	52.69	41.76
Zm00001d036364_P001	Maize	nucleus	48.39	41.41
HORVU4Hr1G081430.1	Barley	cytosol, nucleus	53.76	40.54
TraesCS5A01G500600.1	Wheat	nucleus	53.41	40.38
HORVU4Hr1G081440.3	Barley	nucleus	53.76	39.47
GSMUA_Achr1P18110_001	Banana	cytosol, nucleus, plastid	28.67	36.87
KXG20943	Sorghum	nucleus, plastid	48.03	34.72
VIT_01s0026g02710.t01	Wine grape	nucleus	32.62	32.27
VIT_06s0004g02340.t01	Wine grape	nucleus	20.79	32.22
VIT_19s0027g00880.t01	Wine grape	nucleus	24.37	31.78
VIT_12s0028g00860.t01	Wine grape	nucleus	30.11	28.19
VIT_18s0001g02300.t01	Wine grape	nucleus	30.11	28.09
VIT_07s0031g02610.t01	Wine grape	nucleus	29.39	27.89
VIT_19s0027g00870.t01	Wine grape	nucleus	27.24	27.44
VIT_19s0027g00860.t01	Wine grape	nucleus	26.88	27.17
VIT_19s0027g00840.t01	Wine grape	nucleus	27.6	27.11
VIT_14s0108g00860.t01	Wine grape	nucleus	34.05	26.91
VIT_06s0004g00020.t01	Wine grape	nucleus	27.96	26.26
VIT_19s0027g00910.t01	Wine grape	cytoskeleton, cytosol, nucleus	27.24	25.76
VIT_19s0014g03290.t01	Wine grape	nucleus	30.47	25.53
VIT_00s0375g00040.t01	Wine grape	nucleus	29.39	24.77
VIT_01s0026g02360.t01	Wine grape	nucleus	34.77	24.19
VIT_08s0007g07670.t01	Wine grape	nucleus	29.03	24.18
VIT_19s0014g03300.t01	Wine grape	nucleus	30.47	24.08
VIT_08s0040g02110.t01	Wine grape	nucleus	28.67	23.39
VIT_06s0004g03080.t01	Wine grape	nucleus	29.39	22.78
VIT_12s0035g02020.t01	Wine grape	nucleus	34.41	21.05

Protein Annotations

EntrezGene:100243861	wikigene:100243861	MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:AM434452	ProteinID:CAN62781
ProteinID:CAN62781.1	ProteinID:CBI18791	ProteinID:CBI18791.3	UniProt:D7ST01	EMBL:FN595014	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	EntrezGene:LOC100243861	wikigene:LOC100243861
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF37
SUPFAM:SSF101941	TIGR:TC62861	UniParc:UPI0001986334	ArrayExpress:VIT_04s0008g00150	EnsemblPlantsGene:VIT_04s0008g00150	EnsemblPlants:VIT_04s0008g00150.t01
unigene:Vvi.7216	RefSeq:XP_002269602	RefSeq:XP_002269602.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr4_random:-:62912..64224

Molecular Weight (calculated)

32254.6 Da

IEP (calculated)

7.662

GRAVY (calculated)

-0.659

Length

279 amino acids

Sequence
(BLAST)

001: MDKTTSELGL PGFRFHPTEE ELLDFYLRKM VLGKKQCLSI IGFLNIYHHE PWDLPGLSKV GEREWYFFVP RDRKNGHGGR PNRTTEKGFW KATGSDRLIR
101: CLRDPKKILG LRKTLVFYKG RAPRGSKTDW IMNEYRLPNT SSSLKEDIVL CKIYRKATSL KVMEQRAAME EESRMSHLTH SYSSPPIQES FSSHDTHQNF
201: GSAMPPHDIV LKAEEEEEVV LTEEEQENRT ACSSLGVATA KENLTELQLP KLHMDWTADP LWTLLRSPLL DNSSPYPMW

Best Arabidopsis Sequence Match ( AT2G17040.1 )
(BLAST)

001: MGKDIELPGF RFHPTEEELL DFYLKNMVYG KRSSVEVIGF LNIYRHDPWD LPGLSRIGER EWYFFVPRER KHGNGGRPSR TTEKGYWKAT GSDRKIISLS
101: EPKRVIGLKK TLVFYRGRAP GGSKTDWVMN EFRMPDNCSL PKDVVLCKIY RKATSLKVLE QRAEMEAKMN QTCPNSPLSS SETISFVGKE ENMMTSFRAP
201: QVIAMEEANK IQMHQENAKT EEKQREAETK EPSSSLKLPF GSLPELQLPK PGVEWDQLLS ISPWLQNLTP IVNIYW

Arabidopsis Description

anac036NAC domain containing protein 36 [Source:UniProtKB/TrEMBL;Acc:F4IME8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.