Factsheet for VIT_14s0108g00860.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93526	Soybean	nucleus	63.74	61.31
VIT_01s0026g02360.t01	Wine grape	nucleus	68.84	60.6
KRH18479	Soybean	nucleus	62.89	58.42
PGSC0003DMT400003343	Potato	nucleus	64.59	57.58
Solyc02g087920.2.1	Tomato	nucleus	61.19	56.4
CDY11662	Canola	nucleus	48.16	50.75
AT5G39820.1	Thale cress	nucleus	47.88	50.15
Bra028441.1-P	Field mustard	nucleus	47.03	49.55
CDX67438	Canola	nucleus	46.74	49.25
TraesCS5A01G228000.1	Wheat	nucleus	54.11	48.48
TraesCS5D01G239600.1	Wheat	nucleus	53.82	48.22
TraesCS5B01G226800.1	Wheat	nucleus	53.82	48.22
VIT_19s0027g00880.t01	Wine grape	nucleus	29.18	48.13
VIT_12s0028g00860.t01	Wine grape	nucleus	35.69	42.28
VIT_19s0027g00860.t01	Wine grape	nucleus	32.86	42.03
VIT_19s0027g00870.t01	Wine grape	nucleus	32.86	41.88
VIT_19s0027g00910.t01	Wine grape	cytoskeleton, cytosol, nucleus	34.56	41.36
VIT_19s0027g00840.t01	Wine grape	nucleus	33.14	41.2
VIT_06s0004g02340.t01	Wine grape	nucleus	19.26	37.78
VIT_03s0038g03410.t01	Wine grape	nucleus	28.05	35.48
VIT_01s0026g02710.t01	Wine grape	nucleus	27.76	34.75
VIT_04s0008g00150.t01	Wine grape	nucleus	26.91	34.05
VIT_06s0004g00020.t01	Wine grape	nucleus	26.63	31.65
VIT_07s0031g02610.t01	Wine grape	nucleus	26.06	31.29
VIT_18s0001g02300.t01	Wine grape	nucleus	26.06	30.77
VIT_19s0014g03290.t01	Wine grape	nucleus	28.9	30.63
VIT_00s0375g00040.t01	Wine grape	nucleus	28.33	30.21
VIT_19s0014g03300.t01	Wine grape	nucleus	28.61	28.61
VIT_08s0007g07670.t01	Wine grape	nucleus	26.35	27.76
VIT_08s0040g02110.t01	Wine grape	nucleus	26.63	27.49
VIT_06s0004g03080.t01	Wine grape	nucleus	25.21	24.72
VIT_12s0035g02020.t01	Wine grape	nucleus	31.16	24.12

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:CBI22222	ProteinID:CBI22222.3	UniProt:D7SXC5	EMBL:FN595239
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR44574	PANTHER:PTHR44574:SF4	SUPFAM:SSF101941
UniParc:UPI0001BE21EE	ArrayExpress:VIT_14s0108g00860	EnsemblPlantsGene:VIT_14s0108g00860	EnsemblPlants:VIT_14s0108g00860.t01	SEG:seg	:

Description

No Description!

Coordinates

chr14:-:29535161..29536515

Molecular Weight (calculated)

39334.4 Da

IEP (calculated)

8.247

GRAVY (calculated)

-0.574

Length

353 amino acids

Sequence
(BLAST)

001: MAERNDTDKM DDVMLPGFRF HPTDEELVGF YLKRKIQQRS LPIELIKQVD IYKYDPWDLP KLATTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT
101: DRPIYSSDGT RCIGLKKSLV FYRGRAAKGI KTDWMMHEFR LPSLGDSAPP KKLLDKSLPP NDSWAICRIF KKTNSMAQRA LSHSWVSPPF PATAMTADIL
201: SHGAHCTQFS SENISCTTEN GSSIDLCCNN DLQQASPASF SALDIPSYKA INPAACKPSI IDFGGPQQQF NGFSISLPED LQGNIHTGEE DTGFRKSASA
301: GQANNPCGNI RSIGFPFSLP SNVADPWKLN LPWDSPPCPS EMSTSYSTNK GYT

Best Arabidopsis Sequence Match ( AT1G26870.1 )
(BLAST)

001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT

Arabidopsis Description

FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.