Factsheet for VIT_01s0026g02360.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0108g00860.t01	Wine grape	nucleus	60.6	68.84
KRG99080	Soybean	nucleus	61.1	61.1
PGSC0003DMT400080307	Potato	nucleus	57.86	59.95
Solyc05g007550.1.1	Tomato	nucleus	58.1	59.74
GSMUA_Achr6P02680_001	Banana	nucleus	56.86	59.22
KRH45921	Soybean	nucleus	60.35	58.6
VIT_19s0027g00880.t01	Wine grape	nucleus	25.44	47.66
VIT_12s0028g00860.t01	Wine grape	nucleus	31.92	42.95
VIT_19s0027g00860.t01	Wine grape	nucleus	29.43	42.75
VIT_19s0027g00870.t01	Wine grape	nucleus	29.43	42.6
VIT_19s0027g00910.t01	Wine grape	cytoskeleton, cytosol, nucleus	30.67	41.69
VIT_19s0027g00840.t01	Wine grape	nucleus	28.43	40.14
VIT_03s0038g03410.t01	Wine grape	nucleus	25.44	36.56
VIT_04s0008g00150.t01	Wine grape	nucleus	24.19	34.77
VIT_01s0026g02710.t01	Wine grape	nucleus	24.44	34.75
VIT_06s0004g02340.t01	Wine grape	nucleus	15.46	34.44
VIT_06s0004g00020.t01	Wine grape	nucleus	24.44	33.0
VIT_19s0014g03290.t01	Wine grape	nucleus	26.68	32.13
VIT_18s0001g02300.t01	Wine grape	nucleus	23.94	32.11
VIT_07s0031g02610.t01	Wine grape	nucleus	23.44	31.97
VIT_00s0375g00040.t01	Wine grape	nucleus	25.69	31.12
VIT_19s0014g03300.t01	Wine grape	nucleus	25.94	29.46
CDY54324	Canola	extracellular	20.2	29.24
VIT_08s0007g07670.t01	Wine grape	nucleus	23.94	28.66
CDY16201	Canola	plastid	18.7	28.52
VIT_08s0040g02110.t01	Wine grape	nucleus	23.69	27.78
VIT_06s0004g03080.t01	Wine grape	nucleus	23.69	26.39
VIT_12s0035g02020.t01	Wine grape	nucleus	29.18	25.66

Protein Annotations

EntrezGene:100256910	wikigene:100256910	MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:AM478268	ProteinID:CAN61983
ProteinID:CAN61983.1	ProteinID:CCB56551	ProteinID:CCB56551.1	UniProt:F6HPC3	EMBL:FN596002	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	EntrezGene:LOC100256910	wikigene:LOC100256910
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR44574	PANTHER:PTHR44574:SF1
SUPFAM:SSF101941	UniParc:UPI0001982AB6	ArrayExpress:VIT_01s0026g02360	EnsemblPlantsGene:VIT_01s0026g02360	EnsemblPlants:VIT_01s0026g02360.t01	RefSeq:XP_002270334
RefSeq:XP_002270334.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:+:11873275..11874933

Molecular Weight (calculated)

44783.2 Da

IEP (calculated)

7.758

GRAVY (calculated)

-0.456

Length

401 amino acids

Sequence
(BLAST)

001: MERNDADKLE EVMLPGFRFH PTDEELVGFY LKRKIQQKPL SIELIKQLDI YKYDPWDLPK LATTGEKEWY FYCPRDRKYR NSARPNRVTG AGFWKATGTD
101: RPIYSSEGTK CIGLKKSLVF YKGRAAKGIK TDWMMHEFRL PSLTNSAPPK RLMDKSVPAN DSWAICRIFK KTNSMAQRAL SHSWVSPLPE TTTSDILGQF
201: ARNADHQFSS ENMSLAAKPS SGFHFCFTED LQQTSTTTFS PIHVSSYKPI NPIAGKPSQL STAIGDLHTS FMLSQLGTSG PVTPTVDVSS MLLNMPSSML
301: GDLGKTSESI DFSGSEQLCN GFPVTLPQDI QGNVCSGEEA ALLKNLNVIH GDDQWESVRA MGFPFGLPLN MAEGWKPNML WDSSPCPSEM STSYSTNKCY
401: T

Best Arabidopsis Sequence Match ( AT1G26870.1 )
(BLAST)

001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT

Arabidopsis Description

FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.