Factsheet for Solyc05g007550.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080307	Potato	nucleus	96.67	97.42
VIT_01s0026g02360.t01	Wine grape	nucleus	59.74	58.1
GSMUA_Achr6P02680_001	Banana	nucleus	53.33	54.03
KRG99080	Soybean	nucleus	55.38	53.87
KRH45921	Soybean	nucleus	56.41	53.27
Solyc02g087920.2.1	Tomato	nucleus	50.51	51.44
Solyc05g021090.2.1	Tomato	nucleus	27.69	38.71
Solyc02g069960.2.1	Tomato	nucleus	29.74	37.42
Solyc02g061780.2.1	Tomato	nucleus	22.56	36.07
Solyc04g005610.2.1	Tomato	nucleus	25.38	36.0
Solyc07g045030.2.1	Tomato	nucleus	28.72	33.84
Solyc05g007770.2.1	Tomato	nucleus	23.85	32.98
Solyc10g055760.1.1	Tomato	cytosol	23.59	32.51
Solyc11g017470.1.1	Tomato	nucleus	23.33	31.27
Solyc06g060230.2.1	Tomato	nucleus	23.08	30.41
Solyc04g009440.2.1	Tomato	nucleus	22.56	29.24
Solyc07g063420.2.1	Tomato	nucleus	24.1	28.57
Solyc07g063410.2.1	Tomato	nucleus	25.38	27.81
Solyc12g013620.1.1	Tomato	nucleus	24.36	27.22
Solyc11g065540.1.1	Tomato	nucleus	21.03	26.54
Solyc10g083450.1.1	Tomato	cytosol	19.49	26.3
Solyc10g006880.2.1	Tomato	nucleus	23.59	25.92
Solyc01g102740.2.1	Tomato	nucleus	26.67	25.18
CDY16201	Canola	plastid	16.15	23.95
CDY54324	Canola	extracellular	16.41	23.1
Solyc07g006840.1.1	Tomato	nucleus	22.56	18.22

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4BWT0	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR44574	PANTHER:PTHR44574:SF1	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc05g007550.1	EnsemblPlants:Solyc05g007550.1.1	UniParc:UPI0002765CAC
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:2096116..2098418

Molecular Weight (calculated)

44014.6 Da

IEP (calculated)

7.092

GRAVY (calculated)

-0.569

Length

390 amino acids

Sequence
(BLAST)

001: MDEVMLPGFR FHPTDEELVG FYLRRKVQQK PISIELIKQL DIYKYDPWDL PTELAAVGEK EWYFYCPRDR KYRNSARPNR VTGAGFWKAT GTDRPIYSSE
101: GSKCIGLKKS LVFYKGRAAK GIKTDWMMHE FRLPSITDSN APKRFLDKHI PPNDSWAICR IFKKANSNAH RALSHSWVSP PQLLPQNNTT SHDFLTSSHF
201: TNNSNEMSSF IHKTTSTTSP IQFNDLLQNS SNNNMSSTFT TLDLPLYKTL NSLSNHNNDP ITSYTFSSSC VDNMNNIDAS SLLLNMSSSI FGDYSIALPE
301: NIEGGGGGGV HDDTTTTTLK EANNVIINNM EHMEELQWGN VVRSNNIGLM NNFPLNMAAD AWKTNLLWDS SSPCPSSEMS TSYSTNKCYT

Best Arabidopsis Sequence Match ( AT1G26870.1 )
(BLAST)

001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT

Arabidopsis Description

FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.