Factsheet for Solyc10g083450.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g065540.1.1	Tomato	nucleus	51.21	47.9
Solyc04g005610.2.1	Tomato	nucleus	33.22	34.91
Solyc05g007770.2.1	Tomato	nucleus	32.87	33.69
Solyc11g017470.1.1	Tomato	nucleus	33.56	33.33
Solyc06g060230.2.1	Tomato	nucleus	33.91	33.11
Solyc04g009440.2.1	Tomato	nucleus	31.83	30.56
Solyc07g063420.2.1	Tomato	nucleus	33.22	29.18
Solyc12g013620.1.1	Tomato	nucleus	34.26	28.37
Solyc02g061780.2.1	Tomato	nucleus	23.18	27.46
Solyc10g006880.2.1	Tomato	nucleus	33.56	27.32
Solyc07g063410.2.1	Tomato	nucleus	32.18	26.12
Solyc05g021090.2.1	Tomato	nucleus	23.88	24.73
Solyc02g069960.2.1	Tomato	nucleus	26.3	24.52
Os05t0415400-01	Rice	extracellular, nucleus, plastid	26.3	24.52
Solyc10g055760.1.1	Tomato	cytosol	23.18	23.67
Solyc07g045030.2.1	Tomato	nucleus	25.61	22.36
Solyc02g087920.2.1	Tomato	nucleus	25.95	19.58
Solyc05g007550.1.1	Tomato	nucleus	26.3	19.49
Solyc07g006840.1.1	Tomato	nucleus	30.1	18.01
Solyc01g102740.2.1	Tomato	nucleus	24.91	17.43
Os02t0745300-00	Rice	plastid	0.69	1.21

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4D3D2	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31719	PANTHER:PTHR31719:SF81	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc10g083450.1	EnsemblPlants:Solyc10g083450.1.1	UniParc:UPI0002769DB5
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:-:63246281..63249224

Molecular Weight (calculated)

34370.2 Da

IEP (calculated)

5.940

GRAVY (calculated)

-0.954

Length

289 amino acids

Sequence
(BLAST)

001: MESYEKNMAF INSNFENPNP NDFVFPVGYR FCPRDDELIT HYLLKRIRNE VLPHDKIKEV NLYKYSPYDL AEIYPELGEK EWYFFTPRNR KYPNGHRPNR
101: AAGRGYWKAT GADKPIIHNN VTVGFRKALV FYEGKPPKGL KTNWIMHEYR VNESRRIKMH AADMKLDDWV LCMIYKRCTK SKDSKKQKEQ EDELEDASKI
201: NSAENYEWTM DSCLIEFAKR QFEDPYQYLN MSENVSIDCY NNTFPIIDFN NLYQVPLDNL YQNPYYNTGT TESQNVLDDD SPDDKSTHQ

Best Arabidopsis Sequence Match ( AT1G69490.1 )
(BLAST)

001: MEVTSQSTLP PGFRFHPTDE ELIVYYLRNQ TMSKPCPVSI IPEVDIYKFD PWQLPEKTEF GENEWYFFSP RERKYPNGVR PNRAAVSGYW KATGTDKAIH
101: SGSSNVGVKK ALVFYKGRPP KGIKTDWIMH EYRLHDSRKA STKRNGSMRL DEWVLCRIYK KRGASKLLNE QEGFMDEVLM EDETKVVVNE AERRTEEEIM
201: MMTSMKLPRT CSLAHLLEMD YMGPVSHIDN FSQFDHLHQP DSESSWFGDL QFNQDEILNH HRQAMFKF

Arabidopsis Description

NAC029NAP [Source:UniProtKB/TrEMBL;Acc:A0A178W8K0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.